RNA–Protein interactions for RNA: ENST00000396401.7

TCEA1-201, Transcript of transcription elongation factor A1, humanhuman

TSL 1 (best) BASIC

Gene TCEA1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-201ENST00000396401 ZCCHC11Q5TAX3 1644 aaKnown RBP22.66■■□□□ 1.22
TCEA1-201ENST00000396401 ZFYVE16Q7Z3T8 1539 aa22.66■■□□□ 1.22
TCEA1-201ENST00000396401 NOS1P29475 1434 aa22.66■■□□□ 1.22
TCEA1-201ENST00000396401 BECN1Q14457 450 aa22.66■■□□□ 1.22
TCEA1-201ENST00000396401 KANK1Q14678 1352 aa22.65■■□□□ 1.22
TCEA1-201ENST00000396401 ANTXR1Q9H6X2 564 aa22.64■■□□□ 1.21
TCEA1-201ENST00000396401 POLR3AO14802 1390 aaPredicted RBP22.63■■□□□ 1.21
TCEA1-201ENST00000396401 GGT6Q6P531 493 aa22.63■■□□□ 1.21
TCEA1-201ENST00000396401 U2SURPO15042 1029 aaKnown RBP22.63■■□□□ 1.21
TCEA1-201ENST00000396401 TBC1D32Q96NH3 1257 aa22.63■■□□□ 1.21
TCEA1-201ENST00000396401 FTSJ3Q8IY81 847 aaKnown RBP22.62■■□□□ 1.21
TCEA1-201ENST00000396401 CABP2Q9NPB3 220 aa22.62■■□□□ 1.21
TCEA1-201ENST00000396401 PMFBP1Q8TBY8 1022 aa22.61■■□□□ 1.21
TCEA1-201ENST00000396401 UPF2Q9HAU5 1272 aaKnown RBP22.61■■□□□ 1.21
TCEA1-201ENST00000396401 VIRMAQ69YN4 1812 aaKnown RBP22.6■■□□□ 1.21
TCEA1-201ENST00000396401 MAP3K4Q9Y6R4 1608 aa22.59■■□□□ 1.21
TCEA1-201ENST00000396401 EXOSC9Q06265 439 aaKnown RBP22.59■■□□□ 1.21
TCEA1-201ENST00000396401 PANK2Q9BZ23 570 aa22.59■■□□□ 1.21
TCEA1-201ENST00000396401 SHPRHQ149N8 1683 aa22.58■■□□□ 1.21
TCEA1-201ENST00000396401 ITPRIPQ8IWB1 547 aa22.58■■□□□ 1.21
TCEA1-201ENST00000396401 SMC4Q9NTJ3 1288 aa22.58■■□□□ 1.21
TCEA1-201ENST00000396401 RRAGDQ9NQL2 400 aaPredicted RBP22.58■■□□□ 1.2
TCEA1-201ENST00000396401 STK26Q9P289 416 aa22.58■■□□□ 1.2
TCEA1-201ENST00000396401 MROH2AA6NES4 1674 aa22.57■■□□□ 1.2
TCEA1-201ENST00000396401 GGNBP2Q9H3C7 697 aa22.57■■□□□ 1.2
TCEA1-201ENST00000396401 RWDD1Q9H446 243 aaPredicted RBP22.57■■□□□ 1.2
TCEA1-201ENST00000396401 MVPQ14764 893 aaKnown RBP22.56■■□□□ 1.2
TCEA1-201ENST00000396401 TET3O43151 1660 aa22.56■■□□□ 1.2
TCEA1-201ENST00000396401 FBLN1P23142 703 aa22.55■■□□□ 1.2
TCEA1-201ENST00000396401 ATP7AQ04656 1500 aa22.55■■□□□ 1.2
TCEA1-201ENST00000396401 FANCAO15360 1455 aa22.55■■□□□ 1.2
TCEA1-201ENST00000396401 TRIM27P14373 513 aa22.54■■□□□ 1.2
TCEA1-201ENST00000396401 DZIP1LQ8IYY4 767 aaKnown RBP22.54■■□□□ 1.2
TCEA1-201ENST00000396401 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
TCEA1-201ENST00000396401 SSH1Q8WYL5 1049 aa22.53■■□□□ 1.2
TCEA1-201ENST00000396401 STAC3Q96MF2 364 aa22.53■■□□□ 1.2
TCEA1-201ENST00000396401 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
TCEA1-201ENST00000396401 ZKSCAN2Q63HK3 967 aa22.52■■□□□ 1.2
TCEA1-201ENST00000396401 WDR63Q8IWG1 891 aa22.52■■□□□ 1.2
TCEA1-201ENST00000396401 CFAP53Q96M91 514 aa22.52■■□□□ 1.2
TCEA1-201ENST00000396401 C22orf23Q9BZE7 217 aa22.52■■□□□ 1.2
TCEA1-201ENST00000396401 IQSEC2Q5JU85 1478 aa22.52■■□□□ 1.19
TCEA1-201ENST00000396401 FOXD4L1Q9NU39 408 aa22.51■■□□□ 1.19
TCEA1-201ENST00000396401 RTEL1-TNFRSF6BF6WH68 1400 aa22.5■■□□□ 1.19
TCEA1-201ENST00000396401 NOB1Q9ULX3 412 aaKnown RBP22.5■■□□□ 1.19
TCEA1-201ENST00000396401 MYH16Q9H6N6 1097 aa22.5■■□□□ 1.19
TCEA1-201ENST00000396401 NINLQ9Y2I6 1382 aa22.5■■□□□ 1.19
TCEA1-201ENST00000396401 ADGRL1O94910 1474 aa22.5■■□□□ 1.19
TCEA1-201ENST00000396401 DEPDC5O75140 1603 aa22.49■■□□□ 1.19
TCEA1-201ENST00000396401 XRCC6P12956 609 aaKnown RBP eCLIP22.49■■□□□ 1.19
TCEA1-201ENST00000396401 FAM43AQ8N2R8 423 aa22.48■■□□□ 1.19
TCEA1-201ENST00000396401 TMEM57Q8N5G2 664 aa22.48■■□□□ 1.19
TCEA1-201ENST00000396401 NGEFQ8N5V2 710 aa22.48■■□□□ 1.19
TCEA1-201ENST00000396401 LNPKQ9C0E8 428 aa22.48■■□□□ 1.19
TCEA1-201ENST00000396401 KIF1BO60333 1816 aa22.48■■□□□ 1.19
TCEA1-201ENST00000396401 ZNF518AQ6AHZ1 1483 aa22.48■■□□□ 1.19
TCEA1-201ENST00000396401 C14orf93Q9H972 538 aaKnown RBP22.47■■□□□ 1.19
TCEA1-201ENST00000396401 MROH1Q8NDA8 1641 aa22.47■■□□□ 1.19
TCEA1-201ENST00000396401 MYOM2P54296 1465 aa22.47■■□□□ 1.19
TCEA1-201ENST00000396401 MCM4P33991 863 aa22.46■■□□□ 1.19
TCEA1-201ENST00000396401 C1orf115Q9H7X2 142 aa22.46■■□□□ 1.19
TCEA1-201ENST00000396401 SRPK2P78362 688 aaKnown RBP22.45■■□□□ 1.19
TCEA1-201ENST00000396401 TRIM35Q9UPQ4 493 aa22.45■■□□□ 1.19
TCEA1-201ENST00000396401 PPRC1Q5VV67 1664 aaKnown RBP22.45■■□□□ 1.18
TCEA1-201ENST00000396401 KIAA1210Q9ULL0 1709 aa22.45■■□□□ 1.18
TCEA1-201ENST00000396401 TMPOP42166 694 aaKnown RBP22.44■■□□□ 1.18
TCEA1-201ENST00000396401 CD109Q6YHK3 1445 aa22.43■■□□□ 1.18
TCEA1-201ENST00000396401 QRICH2Q9H0J4 1663 aa22.43■■□□□ 1.18
TCEA1-201ENST00000396401 VWDEQ8N2E2 1590 aa22.43■■□□□ 1.18
TCEA1-201ENST00000396401 ELL2O00472 640 aaPredicted RBP22.43■■□□□ 1.18
TCEA1-201ENST00000396401 THUMPD2Q9BTF0 503 aaKnown RBP22.43■■□□□ 1.18
TCEA1-201ENST00000396401 MINK1Q8N4C8 1332 aaPredicted RBP22.42■■□□□ 1.18
TCEA1-201ENST00000396401 RIPK4P57078 832 aa22.42■■□□□ 1.18
TCEA1-201ENST00000396401 ATF7IPQ6VMQ6 1270 aa22.41■■□□□ 1.18
TCEA1-201ENST00000396401 INO80Q9ULG1 1556 aaPredicted RBP22.41■■□□□ 1.18
TCEA1-201ENST00000396401 GOLGA6L3A6NEY3 463 aa22.41■■□□□ 1.18
TCEA1-201ENST00000396401 SLC24A1O60721 1099 aa22.41■■□□□ 1.18
TCEA1-201ENST00000396401 EFCAB6Q5THR3 1501 aa22.4■■□□□ 1.18
TCEA1-201ENST00000396401 TRAK2O60296 914 aa22.4■■□□□ 1.18
TCEA1-201ENST00000396401 NPATQ14207 1427 aa22.4■■□□□ 1.18
TCEA1-201ENST00000396401 CCDC27Q2M243 656 aa22.39■■□□□ 1.18
TCEA1-201ENST00000396401 SBNO2Q9Y2G9 1366 aa22.39■■□□□ 1.18
TCEA1-201ENST00000396401 PLEKHF1Q96S99 279 aa22.39■■□□□ 1.17
TCEA1-201ENST00000396401 EVC2Q86UK5 1308 aa22.38■■□□□ 1.17
TCEA1-201ENST00000396401 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
TCEA1-201ENST00000396401 A0A1W2PP64 1363 aa22.37■■□□□ 1.17
TCEA1-201ENST00000396401 RBM42Q9BTD8 480 aaKnown RBP22.37■■□□□ 1.17
TCEA1-201ENST00000396401 CD2BP2O95400 341 aaKnown RBP22.36■■□□□ 1.17
TCEA1-201ENST00000396401 NRXN1Q9ULB1 1477 aa22.36■■□□□ 1.17
TCEA1-201ENST00000396401 L1TD1Q5T7N2 865 aaKnown RBP22.36■■□□□ 1.17
TCEA1-201ENST00000396401 HSCBQ8IWL3 235 aa22.36■■□□□ 1.17
TCEA1-201ENST00000396401 CHMP5Q9NZZ3 219 aa22.36■■□□□ 1.17
TCEA1-201ENST00000396401 ADGRB1O14514 1584 aa22.35■■□□□ 1.17
TCEA1-201ENST00000396401 DDX19BQ9UMR2 479 aa22.35■■□□□ 1.17
TCEA1-201ENST00000396401 HMOX1P09601 288 aa22.34■■□□□ 1.17
TCEA1-201ENST00000396401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.34■■□□□ 1.172e-6■■■□□ 15.7
TCEA1-201ENST00000396401 TULP4Q9NRJ4 1543 aa22.34■■□□□ 1.17
TCEA1-201ENST00000396401 ZBTB40Q9NUA8 1239 aa22.34■■□□□ 1.17
TCEA1-201ENST00000396401 MYO3AQ8NEV4 1616 aa22.33■■□□□ 1.17
TCEA1-201ENST00000396401 ANKRD36BQ8N2N9 1353 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms