RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 BCL9LQ86UU0 1499 aa15.13■□□□□ 0.01
LDHC-202ENST00000396215 METP08581 1390 aa15.12■□□□□ 0.01
LDHC-202ENST00000396215 NALCNQ8IZF0 1738 aa15.12■□□□□ 0.01
LDHC-202ENST00000396215 BLMP54132 1417 aaPredicted RBP15.12■□□□□ 0.01
LDHC-202ENST00000396215 IQGAP3Q86VI3 1631 aa15.11■□□□□ 0.01
LDHC-202ENST00000396215 MYOM2P54296 1465 aa15.1■□□□□ 0.01
LDHC-202ENST00000396215 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
LDHC-202ENST00000396215 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.07■□□□□ 0
LDHC-202ENST00000396215 MARF1Q9Y4F3 1742 aaKnown RBP15.07■□□□□ 0
LDHC-202ENST00000396215 ORAI2Q96SN7 254 aa15.07■□□□□ 0
LDHC-202ENST00000396215 SPHKAPQ2M3C7 1700 aa15.06■□□□□ 0
LDHC-202ENST00000396215 PRAG1Q86YV5 1406 aa15.05■□□□□ -0
LDHC-202ENST00000396215 DEFB132Q7Z7B7 95 aa15.04■□□□□ -0
LDHC-202ENST00000396215 GLI3P10071 1580 aa15.02■□□□□ -0
LDHC-202ENST00000396215 RALGAPBQ86X10 1494 aa15.02■□□□□ -0
LDHC-202ENST00000396215 UNC5CLQ8IV45 518 aa15.02■□□□□ -0
LDHC-202ENST00000396215 SLIT2O94813 1529 aa15.02□□□□□ -0.01
LDHC-202ENST00000396215 NPHP3Q7Z494 1330 aa15.01□□□□□ -0.01
LDHC-202ENST00000396215 BRWD3Q6RI45 1802 aa15.01□□□□□ -0.01
LDHC-202ENST00000396215 PXDNQ92626 1479 aa15.01□□□□□ -0.01
LDHC-202ENST00000396215 ONECUT3O60422 494 aaPredicted RBP15□□□□□ -0.01
LDHC-202ENST00000396215 APLP2Q06481 763 aa15□□□□□ -0.01
LDHC-202ENST00000396215 SF3B2Q13435 895 aaKnown RBP15□□□□□ -0.01
LDHC-202ENST00000396215 ROBO2Q9HCK4 1378 aa14.99□□□□□ -0.01
LDHC-202ENST00000396215 NEXMIFQ5QGS0 1516 aa14.99□□□□□ -0.01
LDHC-202ENST00000396215 HRCP23327 699 aa14.99□□□□□ -0.01
LDHC-202ENST00000396215 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
LDHC-202ENST00000396215 ZNF326Q5BKZ1 582 aaKnown RBP14.98□□□□□ -0.01
LDHC-202ENST00000396215 HFM1A2PYH4 1435 aa14.98□□□□□ -0.01
LDHC-202ENST00000396215 NUP155O75694 1391 aa14.98□□□□□ -0.01
LDHC-202ENST00000396215 FAM50AQ14320 339 aaKnown RBP14.96□□□□□ -0.01
LDHC-202ENST00000396215 SEPT12Q8IYM1 358 aa14.95□□□□□ -0.02
LDHC-202ENST00000396215 LRPPRCP42704 1394 aaKnown RBP14.95□□□□□ -0.02
LDHC-202ENST00000396215 CDC42BPGQ6DT37 1551 aa14.94□□□□□ -0.02
LDHC-202ENST00000396215 VPS72Q15906 364 aa14.94□□□□□ -0.02
LDHC-202ENST00000396215 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
LDHC-202ENST00000396215 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
LDHC-202ENST00000396215 PSDA5PKW4 1024 aaPredicted RBP14.92□□□□□ -0.02
LDHC-202ENST00000396215 FOXO3O43524 673 aa14.92□□□□□ -0.02
LDHC-202ENST00000396215 BAG6P46379 1132 aa14.92□□□□□ -0.02
LDHC-202ENST00000396215 KRT27Q7Z3Y8 459 aa14.92□□□□□ -0.02
LDHC-202ENST00000396215 VGFO15240 615 aaPredicted RBP14.91□□□□□ -0.02
LDHC-202ENST00000396215 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
LDHC-202ENST00000396215 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
LDHC-202ENST00000396215 SPATA31A3Q5VYP0 1347 aa14.91□□□□□ -0.02
LDHC-202ENST00000396215 NWD2Q9ULI1 1742 aa14.89□□□□□ -0.03
LDHC-202ENST00000396215 CLTCL1P53675 1640 aa14.89□□□□□ -0.03
LDHC-202ENST00000396215 SLC4A2P04920 1241 aa14.89□□□□□ -0.03
LDHC-202ENST00000396215 XPCQ01831 940 aaPredicted RBP14.88□□□□□ -0.03
LDHC-202ENST00000396215 KIF1BO60333 1816 aa14.87□□□□□ -0.03
LDHC-202ENST00000396215 DISP2A7MBM2 1401 aa14.87□□□□□ -0.03
LDHC-202ENST00000396215 RPGRIP1LQ68CZ1 1315 aa14.87□□□□□ -0.03
LDHC-202ENST00000396215 CCDC144AA2RUR9 1427 aa14.85□□□□□ -0.03
LDHC-202ENST00000396215 NAIPQ13075 1403 aa14.84□□□□□ -0.03
LDHC-202ENST00000396215 PLCH1Q4KWH8 1693 aa14.84□□□□□ -0.03
LDHC-202ENST00000396215 RGPD1P0DJD0 1748 aa14.84□□□□□ -0.03
LDHC-202ENST00000396215 YY1P25490 414 aa14.84□□□□□ -0.03
LDHC-202ENST00000396215 KIF1AQ12756 1690 aa14.84□□□□□ -0.03
LDHC-202ENST00000396215 TECPR2O15040 1411 aa14.83□□□□□ -0.03
LDHC-202ENST00000396215 EN1Q05925 392 aaPredicted RBP14.83□□□□□ -0.04
LDHC-202ENST00000396215 R3HDM1Q15032 1099 aaKnown RBP14.83□□□□□ -0.04
LDHC-202ENST00000396215 KRT28Q7Z3Y7 464 aa14.82□□□□□ -0.04
LDHC-202ENST00000396215 TNS3Q68CZ2 1445 aa14.81□□□□□ -0.04
LDHC-202ENST00000396215 FMN2Q9NZ56 1722 aa14.8□□□□□ -0.04
LDHC-202ENST00000396215 PPLO60437 1756 aa14.8□□□□□ -0.04
LDHC-202ENST00000396215 SBNO1A3KN83 1393 aa14.79□□□□□ -0.04
LDHC-202ENST00000396215 FAM83GA6ND36 823 aa14.79□□□□□ -0.04
LDHC-202ENST00000396215 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
LDHC-202ENST00000396215 NRAPQ86VF7 1730 aa14.78□□□□□ -0.04
LDHC-202ENST00000396215 ABCA3Q99758 1704 aa14.78□□□□□ -0.04
LDHC-202ENST00000396215 TNS1Q9HBL0 1735 aaKnown RBP14.78□□□□□ -0.04
LDHC-202ENST00000396215 ABCC11Q96J66 1382 aa14.78□□□□□ -0.04
LDHC-202ENST00000396215 PSME1Q06323 249 aa14.78□□□□□ -0.04
LDHC-202ENST00000396215 NUTM2FA1L443 756 aa14.77□□□□□ -0.05
LDHC-202ENST00000396215 HAP1P54257 671 aaPredicted RBP14.77□□□□□ -0.05
LDHC-202ENST00000396215 FAM98CQ17RN3 349 aaKnown RBP14.77□□□□□ -0.05
LDHC-202ENST00000396215 WAPLQ7Z5K2 1190 aa14.77□□□□□ -0.05
LDHC-202ENST00000396215 CABLES1Q8TDN4 633 aa14.77□□□□□ -0.05
LDHC-202ENST00000396215 CAMKK2Q96RR4 588 aa14.77□□□□□ -0.05
LDHC-202ENST00000396215 ARHGEF10O15013 1369 aa14.76□□□□□ -0.05
LDHC-202ENST00000396215 PARD3Q8TEW0 1356 aa14.76□□□□□ -0.05
LDHC-202ENST00000396215 EZH2Q15910 746 aaKnown RBP14.76□□□□□ -0.05
LDHC-202ENST00000396215 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
LDHC-202ENST00000396215 UTRNP46939 3433 aa14.75□□□□□ -0.05
LDHC-202ENST00000396215 SIRT1Q96EB6 747 aa14.75□□□□□ -0.05
LDHC-202ENST00000396215 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
LDHC-202ENST00000396215 PHF8Q9UPP1 1060 aa14.74□□□□□ -0.05
LDHC-202ENST00000396215 NRXN1Q9ULB1 1477 aa14.74□□□□□ -0.05
LDHC-202ENST00000396215 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
LDHC-202ENST00000396215 SPATA31A5Q5VU36 1347 aa14.73□□□□□ -0.05
LDHC-202ENST00000396215 SPATA31A7Q8IWB4 1347 aa14.73□□□□□ -0.05
LDHC-202ENST00000396215 A0A0G2JS52 829 aa14.73□□□□□ -0.05
LDHC-202ENST00000396215 MYT1Q01538 1121 aa14.73□□□□□ -0.05
LDHC-202ENST00000396215 ADGRB2O60241 1585 aa14.73□□□□□ -0.05
LDHC-202ENST00000396215 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
LDHC-202ENST00000396215 BTG4Q9NY30 223 aa14.72□□□□□ -0.05
LDHC-202ENST00000396215 COL14A1Q05707 1796 aaKnown RBP14.72□□□□□ -0.05
LDHC-202ENST00000396215 RGPD8O14715 1765 aaPredicted RBP14.71□□□□□ -0.05
LDHC-202ENST00000396215 FAM182BQ5T319 152 aa14.71□□□□□ -0.05
LDHC-202ENST00000396215 ADGRF5Q8IZF2 1346 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms