RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 RIMBP3CA6NJZ7 1639 aa9.1□□□□□ -0.95
BDNF-207ENST00000395986 RIMBP3BA6NNM3 1639 aa9.1□□□□□ -0.95
BDNF-207ENST00000395986 RIMBP3Q9UFD9 1639 aa9.1□□□□□ -0.95
BDNF-207ENST00000395986 SECISBP2LQ93073 1101 aaKnown RBP9.1□□□□□ -0.95
BDNF-207ENST00000395986 ISY1Q9ULR0 285 aaKnown RBP9.1□□□□□ -0.95
BDNF-207ENST00000395986 TNNT3P45378 269 aaPredicted RBP9.1□□□□□ -0.95
BDNF-207ENST00000395986 SLFN5Q08AF3 891 aa9.1□□□□□ -0.95
BDNF-207ENST00000395986 ZNF692Q9BU19 519 aaPredicted RBP9.1□□□□□ -0.95
BDNF-207ENST00000395986 PTPN23Q9H3S7 1636 aa9.1□□□□□ -0.95
BDNF-207ENST00000395986 ZNF500O60304 480 aaPredicted RBP9.09□□□□□ -0.95
BDNF-207ENST00000395986 NAA30Q147X3 362 aaPredicted RBP9.09□□□□□ -0.95
BDNF-207ENST00000395986 RWDD1Q9H446 243 aaPredicted RBP9.09□□□□□ -0.95
BDNF-207ENST00000395986 CGNL1Q0VF96 1302 aa9.09□□□□□ -0.95
BDNF-207ENST00000395986 MYOM3Q5VTT5 1437 aa9.09□□□□□ -0.95
BDNF-207ENST00000395986 SPC24Q8NBT2 197 aa9.09□□□□□ -0.95
BDNF-207ENST00000395986 TSPY4P0CV99 314 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 TSPY10P0CW01 314 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 RAB3GAP1Q15042 981 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 NCBP3Q53F19 620 aaKnown RBP9.08□□□□□ -0.96
BDNF-207ENST00000395986 PMFBP1Q8TBY8 1022 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 GDPD2Q9HCC8 539 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 CCDC39Q9UFE4 941 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 NSFL1CQ9UNZ2 370 aaKnown RBP9.08□□□□□ -0.96
BDNF-207ENST00000395986 IRX3P78415 501 aaPredicted RBP9.08□□□□□ -0.96
BDNF-207ENST00000395986 USP25Q9UHP3 1055 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 KNSTRNQ9Y448 316 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 ARHGEF11O15085 1522 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 ITPRIPQ8IWB1 547 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 MYRIPQ8NFW9 859 aa9.08□□□□□ -0.96
BDNF-207ENST00000395986 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.08□□□□□ -0.96
BDNF-207ENST00000395986 V9GYY5 206 aaPredicted RBP9.08□□□□□ -0.96
BDNF-207ENST00000395986 PLEKHD1A6NEE1 506 aa9.07□□□□□ -0.96
BDNF-207ENST00000395986 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
BDNF-207ENST00000395986 MLECQ14165 292 aa9.07□□□□□ -0.96
BDNF-207ENST00000395986 CTTNBP2Q8WZ74 1663 aa9.07□□□□□ -0.96
BDNF-207ENST00000395986 APBB1O00213 710 aa9.07□□□□□ -0.96
BDNF-207ENST00000395986 DTNBO60941 627 aa9.07□□□□□ -0.96
BDNF-207ENST00000395986 KLHL40Q2TBA0 621 aa9.07□□□□□ -0.96
BDNF-207ENST00000395986 CFDP1Q9UEE9 299 aaPredicted RBP9.07□□□□□ -0.96
BDNF-207ENST00000395986 ROCK2O75116 1388 aaKnown RBP9.07□□□□□ -0.96
BDNF-207ENST00000395986 ANKRD30BQ9BXX2 1392 aa9.07□□□□□ -0.96
BDNF-207ENST00000395986 TERF1P54274 439 aa9.06□□□□□ -0.96
BDNF-207ENST00000395986 NOLC1Q14978 699 aaKnown RBP eCLIP9.06□□□□□ -0.96
BDNF-207ENST00000395986 DENND4BO75064 1496 aaPredicted RBP9.06□□□□□ -0.96
BDNF-207ENST00000395986 U2SURPO15042 1029 aaKnown RBP9.05□□□□□ -0.96
BDNF-207ENST00000395986 RIOK3O14730 519 aaKnown RBP9.05□□□□□ -0.96
BDNF-207ENST00000395986 CHAF1AQ13111 956 aaPredicted RBP9.05□□□□□ -0.96
BDNF-207ENST00000395986 TMEM63CQ9P1W3 806 aa9.05□□□□□ -0.96
BDNF-207ENST00000395986 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
BDNF-207ENST00000395986 NLRP1Q9C000 1473 aa9.04□□□□□ -0.96
BDNF-207ENST00000395986 PPP2R1AP30153 589 aa9.04□□□□□ -0.96
BDNF-207ENST00000395986 ZGPATQ8N5A5 531 aaKnown RBP9.04□□□□□ -0.96
BDNF-207ENST00000395986 NGEFQ8N5V2 710 aa9.04□□□□□ -0.96
BDNF-207ENST00000395986 PCF11O94913 1555 aaKnown RBP9.04□□□□□ -0.96
BDNF-207ENST00000395986 KIAA0586Q9BVV6 1533 aa9.04□□□□□ -0.96
BDNF-207ENST00000395986 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
BDNF-207ENST00000395986 BCORL1Q5H9F3 1711 aa9.04□□□□□ -0.96
BDNF-207ENST00000395986 PER1O15534 1290 aaPredicted RBP9.03□□□□□ -0.96
BDNF-207ENST00000395986 GPT2Q8TD30 523 aa9.03□□□□□ -0.96
BDNF-207ENST00000395986 C1orf115Q9H7X2 142 aa9.03□□□□□ -0.96
BDNF-207ENST00000395986 KDM6BO15054 1643 aa9.03□□□□□ -0.96
BDNF-207ENST00000395986 APPP05067 770 aa9.03□□□□□ -0.96
BDNF-207ENST00000395986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.03□□□□□ -0.96
BDNF-207ENST00000395986 TOMM22Q9NS69 142 aa9.03□□□□□ -0.96
BDNF-207ENST00000395986 ANKRD45Q5TZF3 282 aa9.03□□□□□ -0.96
BDNF-207ENST00000395986 EIF3AQ14152 1382 aaKnown RBP9.02□□□□□ -0.97
BDNF-207ENST00000395986 IQGAP2Q13576 1575 aa9.02□□□□□ -0.97
BDNF-207ENST00000395986 SMC5Q8IY18 1101 aa9.02□□□□□ -0.97
BDNF-207ENST00000395986 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
BDNF-207ENST00000395986 SRPK2P78362 688 aaKnown RBP9.02□□□□□ -0.97
BDNF-207ENST00000395986 C16orf45Q96MC5 204 aaPredicted RBP9.02□□□□□ -0.97
BDNF-207ENST00000395986 LMBRD1Q9NUN5 540 aa9.02□□□□□ -0.97
BDNF-207ENST00000395986 DISP1Q96F81 1524 aa9.02□□□□□ -0.97
BDNF-207ENST00000395986 AK9Q5TCS8 1911 aa9.01□□□□□ -0.97
BDNF-207ENST00000395986 HMGN5P82970 282 aaKnown RBP9.01□□□□□ -0.97
BDNF-207ENST00000395986 PDE3AQ14432 1141 aa9.01□□□□□ -0.97
BDNF-207ENST00000395986 TIGD1Q96MW7 591 aa9.01□□□□□ -0.97
BDNF-207ENST00000395986 MIA2Q96PC5 1412 aa9.01□□□□□ -0.97
BDNF-207ENST00000395986 RPRD2Q5VT52 1461 aaKnown RBP9.01□□□□□ -0.97
BDNF-207ENST00000395986 PTMSP20962 102 aa9.01□□□□□ -0.97
BDNF-207ENST00000395986 EP400NLQ6ZTU2 488 aa9.01□□□□□ -0.97
BDNF-207ENST00000395986 RBM25P49756 843 aaKnown RBP9□□□□□ -0.97
BDNF-207ENST00000395986 RTF1Q92541 710 aaKnown RBP9□□□□□ -0.97
BDNF-207ENST00000395986 TSR2Q969E8 191 aaKnown RBP9□□□□□ -0.97
BDNF-207ENST00000395986 SENP3Q9H4L4 574 aaPredicted RBP9□□□□□ -0.97
BDNF-207ENST00000395986 PARD3Q8TEW0 1356 aa9□□□□□ -0.97
BDNF-207ENST00000395986 GTF2F1P35269 517 aaKnown RBP eCLIP9□□□□□ -0.97
BDNF-207ENST00000395986 ADCY5O95622 1261 aa9□□□□□ -0.97
BDNF-207ENST00000395986 TNNT1P13805 278 aa9□□□□□ -0.97
BDNF-207ENST00000395986 PDLIM2Q96JY6 352 aa9□□□□□ -0.97
BDNF-207ENST00000395986 SMC4Q9NTJ3 1288 aa9□□□□□ -0.97
BDNF-207ENST00000395986 UGGT2Q9NYU1 1516 aa8.99□□□□□ -0.97
BDNF-207ENST00000395986 HCLS1P14317 486 aaPredicted RBP8.99□□□□□ -0.97
BDNF-207ENST00000395986 RSPH4AQ5TD94 716 aa8.99□□□□□ -0.97
BDNF-207ENST00000395986 JPH4Q96JJ6 628 aa8.99□□□□□ -0.97
BDNF-207ENST00000395986 RARSP54136 660 aaKnown RBP8.99□□□□□ -0.97
BDNF-207ENST00000395986 ZNF445P59923 1031 aa8.99□□□□□ -0.97
BDNF-207ENST00000395986 LRSAM1Q6UWE0 723 aa8.99□□□□□ -0.97
BDNF-207ENST00000395986 GPATCH11Q8N954 259 aa8.99□□□□□ -0.97
BDNF-207ENST00000395986 TEX14Q8IWB6 1497 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms