RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 YTHDC2Q9H6S0 1430 aaKnown RBP20.06■□□□□ 0.8
CXCL12-205ENST00000395794 DCAF11Q8TEB1 546 aa20.05■□□□□ 0.8
CXCL12-205ENST00000395794 RGS17Q9UGC6 210 aaPredicted RBP20.05■□□□□ 0.8
CXCL12-205ENST00000395794 KDM2AQ9Y2K7 1162 aa20.05■□□□□ 0.8
CXCL12-205ENST00000395794 NRXN1Q9ULB1 1477 aa20.05■□□□□ 0.8
CXCL12-205ENST00000395794 SIRT1Q96EB6 747 aa20.04■□□□□ 0.8
CXCL12-205ENST00000395794 ORAI2Q96SN7 254 aa20.04■□□□□ 0.8
CXCL12-205ENST00000395794 DDX17Q92841 729 aaKnown RBP20.03■□□□□ 0.8
CXCL12-205ENST00000395794 LAMC1P11047 1609 aa20.02■□□□□ 0.8
CXCL12-205ENST00000395794 NUTM2BA6NNL0 878 aaPredicted RBP20.02■□□□□ 0.8
CXCL12-205ENST00000395794 NUTM2EB1AL46 878 aaPredicted RBP20.02■□□□□ 0.8
CXCL12-205ENST00000395794 ESCO1Q5FWF5 840 aa20.02■□□□□ 0.8
CXCL12-205ENST00000395794 NUTM2AQ8IVF1 878 aaPredicted RBP20.02■□□□□ 0.8
CXCL12-205ENST00000395794 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
CXCL12-205ENST00000395794 POGKQ9P215 609 aa20■□□□□ 0.79
CXCL12-205ENST00000395794 NHSL1Q5SYE7 1610 aa20■□□□□ 0.79
CXCL12-205ENST00000395794 SHPRHQ149N8 1683 aa20■□□□□ 0.79
CXCL12-205ENST00000395794 PLEKHH1Q9ULM0 1364 aa19.99■□□□□ 0.79
CXCL12-205ENST00000395794 KNDC1Q76NI1 1749 aa19.99■□□□□ 0.79
CXCL12-205ENST00000395794 NUTM2FA1L443 756 aa19.98■□□□□ 0.79
CXCL12-205ENST00000395794 ZNF772Q68DY9 489 aaPredicted RBP19.97■□□□□ 0.79
CXCL12-205ENST00000395794 POTEAQ6S8J7 498 aa19.97■□□□□ 0.79
CXCL12-205ENST00000395794 PRAM1Q96QH2 718 aa19.97■□□□□ 0.79
CXCL12-205ENST00000395794 NPHP3Q7Z494 1330 aa19.97■□□□□ 0.79
CXCL12-205ENST00000395794 LRP6O75581 1613 aa19.96■□□□□ 0.79
CXCL12-205ENST00000395794 SAFB2Q14151 953 aaKnown RBP eCLIP19.96■□□□□ 0.79
CXCL12-205ENST00000395794 SOS2Q07890 1332 aaPredicted RBP19.96■□□□□ 0.79
CXCL12-205ENST00000395794 PNPLA6Q8IY17 1366 aa19.95■□□□□ 0.78
CXCL12-205ENST00000395794 TRAK1Q9UPV9 953 aa19.94■□□□□ 0.78
CXCL12-205ENST00000395794 FOXO3O43524 673 aa19.93■□□□□ 0.78
CXCL12-205ENST00000395794 DLC1Q96QB1 1528 aa19.91■□□□□ 0.78
CXCL12-205ENST00000395794 C8orf37Q96NL8 207 aa19.9■□□□□ 0.78
CXCL12-205ENST00000395794 ADGRB1O14514 1584 aa19.89■□□□□ 0.77
CXCL12-205ENST00000395794 XPCQ01831 940 aaPredicted RBP19.89■□□□□ 0.77
CXCL12-205ENST00000395794 ADAMTS2O95450 1211 aa19.88■□□□□ 0.77
CXCL12-205ENST00000395794 AFF2P51816 1311 aa19.87■□□□□ 0.77
CXCL12-205ENST00000395794 NGLY1Q96IV0 654 aa19.87■□□□□ 0.77
CXCL12-205ENST00000395794 PHF8Q9UPP1 1060 aa19.87■□□□□ 0.77
CXCL12-205ENST00000395794 FMN2Q9NZ56 1722 aa19.87■□□□□ 0.77
CXCL12-205ENST00000395794 MINK1Q8N4C8 1332 aaPredicted RBP19.85■□□□□ 0.77
CXCL12-205ENST00000395794 PSME1Q06323 249 aa19.85■□□□□ 0.77
CXCL12-205ENST00000395794 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
CXCL12-205ENST00000395794 EIF3AQ14152 1382 aaKnown RBP19.84■□□□□ 0.77
CXCL12-205ENST00000395794 RXRBP28702 533 aa19.84■□□□□ 0.77
CXCL12-205ENST00000395794 KRT28Q7Z3Y7 464 aa19.84■□□□□ 0.77
CXCL12-205ENST00000395794 PXDNQ92626 1479 aa19.84■□□□□ 0.77
CXCL12-205ENST00000395794 KIF1AQ12756 1690 aa19.83■□□□□ 0.76
CXCL12-205ENST00000395794 ANKARQ7Z5J8 1434 aa19.82■□□□□ 0.76
CXCL12-205ENST00000395794 WASLO00401 505 aaPredicted RBP19.8■□□□□ 0.76
CXCL12-205ENST00000395794 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
CXCL12-205ENST00000395794 QTRT2Q9H974 415 aaKnown RBP19.8■□□□□ 0.76
CXCL12-205ENST00000395794 SPATA31A3Q5VYP0 1347 aa19.79■□□□□ 0.76
CXCL12-205ENST00000395794 ADGRB2O60241 1585 aa19.79■□□□□ 0.76
CXCL12-205ENST00000395794 PMFBP1Q8TBY8 1022 aa19.79■□□□□ 0.76
CXCL12-205ENST00000395794 COL22A1Q8NFW1 1626 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-205ENST00000395794 HAP1P54257 671 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-205ENST00000395794 LMOD2Q6P5Q4 547 aa19.78■□□□□ 0.76
CXCL12-205ENST00000395794 USP21Q9UK80 565 aa19.78■□□□□ 0.76
CXCL12-205ENST00000395794 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.76
CXCL12-205ENST00000395794 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
CXCL12-205ENST00000395794 RBM6P78332 1123 aaKnown RBP19.76■□□□□ 0.75
CXCL12-205ENST00000395794 SBNO1A3KN83 1393 aa19.75■□□□□ 0.75
CXCL12-205ENST00000395794 GPRASP1Q5JY77 1395 aa19.75■□□□□ 0.75
CXCL12-205ENST00000395794 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
CXCL12-205ENST00000395794 NBPF1Q3BBV0 1214 aa19.75■□□□□ 0.75
CXCL12-205ENST00000395794 KIAA1210Q9ULL0 1709 aa19.75■□□□□ 0.75
CXCL12-205ENST00000395794 FNBP4Q8N3X1 1017 aaPredicted RBP19.74■□□□□ 0.75
CXCL12-205ENST00000395794 NGDNQ8NEJ9 315 aaKnown RBP19.74■□□□□ 0.75
CXCL12-205ENST00000395794 TRPC5Q9UL62 973 aaPredicted RBP19.74■□□□□ 0.75
CXCL12-205ENST00000395794 TULP4Q9NRJ4 1543 aa19.74■□□□□ 0.75
CXCL12-205ENST00000395794 TNS3Q68CZ2 1445 aa19.74■□□□□ 0.75
CXCL12-205ENST00000395794 ARHGEF10O15013 1369 aa19.73■□□□□ 0.75
CXCL12-205ENST00000395794 RGPD8O14715 1765 aaPredicted RBP19.72■□□□□ 0.75
CXCL12-205ENST00000395794 PLEKHG5O94827 1062 aa19.72■□□□□ 0.75
CXCL12-205ENST00000395794 CDK19Q9BWU1 502 aa19.72■□□□□ 0.75
CXCL12-205ENST00000395794 CDK12Q9NYV4 1490 aaPredicted RBP19.72■□□□□ 0.75
CXCL12-205ENST00000395794 PRR36Q9H6K5 1346 aa19.72■□□□□ 0.75
CXCL12-205ENST00000395794 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
CXCL12-205ENST00000395794 NUDT16Q96DE0 195 aaKnown RBP19.71■□□□□ 0.75
CXCL12-205ENST00000395794 USP32Q8NFA0 1604 aa19.7■□□□□ 0.74
CXCL12-205ENST00000395794 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
CXCL12-205ENST00000395794 PAK3O75914 559 aaPredicted RBP19.68■□□□□ 0.74
CXCL12-205ENST00000395794 CABLES1Q8TDN4 633 aa19.67■□□□□ 0.74
CXCL12-205ENST00000395794 CCDC61Q9Y6R9 512 aa19.67■□□□□ 0.74
CXCL12-205ENST00000395794 SRPK2P78362 688 aaKnown RBP19.66■□□□□ 0.74
CXCL12-205ENST00000395794 ROCK2O75116 1388 aaKnown RBP19.65■□□□□ 0.74
CXCL12-205ENST00000395794 UNC5CLQ8IV45 518 aa19.64■□□□□ 0.73
CXCL12-205ENST00000395794 ATRNO75882 1429 aa19.64■□□□□ 0.73
CXCL12-205ENST00000395794 ATP7BP35670 1465 aa19.64■□□□□ 0.73
CXCL12-205ENST00000395794 BCL9LQ86UU0 1499 aa19.63■□□□□ 0.73
CXCL12-205ENST00000395794 RGS12O14924 1447 aa19.63■□□□□ 0.73
CXCL12-205ENST00000395794 TONSLQ96HA7 1378 aa19.62■□□□□ 0.73
CXCL12-205ENST00000395794 ITSN1Q15811 1721 aa19.62■□□□□ 0.73
CXCL12-205ENST00000395794 MARF1Q9Y4F3 1742 aaKnown RBP19.62■□□□□ 0.73
CXCL12-205ENST00000395794 UPF1Q92900 1129 aaKnown RBP eCLIP19.61■□□□□ 0.73
CXCL12-205ENST00000395794 GJD4Q96KN9 370 aaPredicted RBP19.61■□□□□ 0.73
CXCL12-205ENST00000395794 ACEP12821 1306 aa19.6■□□□□ 0.73
CXCL12-205ENST00000395794 PLEKHG3A1L390 1219 aa19.6■□□□□ 0.73
CXCL12-205ENST00000395794 NBPF8Q3BBV2 869 aa19.6■□□□□ 0.73
CXCL12-205ENST00000395794 EVC2Q86UK5 1308 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms