RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 PIK3C2GO75747 1445 aa16.4■□□□□ 0.22
TOM1-202ENST00000395736 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
TOM1-202ENST00000395736 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
TOM1-202ENST00000395736 PNPLA6Q8IY17 1366 aa16.38■□□□□ 0.21
TOM1-202ENST00000395736 ANKRD30BQ9BXX2 1392 aa16.38■□□□□ 0.21
TOM1-202ENST00000395736 NRXN1Q9ULB1 1477 aa16.37■□□□□ 0.21
TOM1-202ENST00000395736 LAMC1P11047 1609 aa16.37■□□□□ 0.21
TOM1-202ENST00000395736 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
TOM1-202ENST00000395736 ACIN1Q9UKV3 1341 aaKnown RBP16.36■□□□□ 0.21
TOM1-202ENST00000395736 TECPR2O15040 1411 aa16.36■□□□□ 0.21
TOM1-202ENST00000395736 MYOM2P54296 1465 aa16.35■□□□□ 0.21
TOM1-202ENST00000395736 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
TOM1-202ENST00000395736 DDX17Q92841 729 aaKnown RBP16.35■□□□□ 0.21
TOM1-202ENST00000395736 C1orf167Q5SNV9 1468 aa16.35■□□□□ 0.21
TOM1-202ENST00000395736 ATRNO75882 1429 aa16.32■□□□□ 0.2
TOM1-202ENST00000395736 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
TOM1-202ENST00000395736 LRPPRCP42704 1394 aaKnown RBP16.31■□□□□ 0.2
TOM1-202ENST00000395736 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
TOM1-202ENST00000395736 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
TOM1-202ENST00000395736 USP21Q9UK80 565 aa16.3■□□□□ 0.2
TOM1-202ENST00000395736 YTHDC2Q9H6S0 1430 aaKnown RBP16.29■□□□□ 0.2
TOM1-202ENST00000395736 PLEKHH1Q9ULM0 1364 aa16.29■□□□□ 0.2
TOM1-202ENST00000395736 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
TOM1-202ENST00000395736 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
TOM1-202ENST00000395736 ABCC11Q96J66 1382 aa16.28■□□□□ 0.2
TOM1-202ENST00000395736 DEFB132Q7Z7B7 95 aa16.28■□□□□ 0.2
TOM1-202ENST00000395736 TRPC5Q9UL62 973 aaPredicted RBP16.28■□□□□ 0.2
TOM1-202ENST00000395736 FMN2Q9NZ56 1722 aa16.28■□□□□ 0.2
TOM1-202ENST00000395736 ADGRB1O14514 1584 aa16.27■□□□□ 0.2
TOM1-202ENST00000395736 STK26Q9P289 416 aa16.27■□□□□ 0.2
TOM1-202ENST00000395736 HRCP23327 699 aa16.26■□□□□ 0.19
TOM1-202ENST00000395736 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
TOM1-202ENST00000395736 FNBP4Q8N3X1 1017 aaPredicted RBP16.26■□□□□ 0.19
TOM1-202ENST00000395736 ORAI2Q96SN7 254 aa16.26■□□□□ 0.19
TOM1-202ENST00000395736 C14orf93Q9H972 538 aaKnown RBP16.26■□□□□ 0.19
TOM1-202ENST00000395736 BCL9LQ86UU0 1499 aa16.26■□□□□ 0.19
TOM1-202ENST00000395736 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
TOM1-202ENST00000395736 BLMP54132 1417 aaPredicted RBP16.25■□□□□ 0.19
TOM1-202ENST00000395736 MARF1Q9Y4F3 1742 aaKnown RBP16.23■□□□□ 0.19
TOM1-202ENST00000395736 COL22A1Q8NFW1 1626 aaPredicted RBP16.23■□□□□ 0.19
TOM1-202ENST00000395736 PXDNQ92626 1479 aa16.22■□□□□ 0.19
TOM1-202ENST00000395736 DLC1Q96QB1 1528 aa16.22■□□□□ 0.19
TOM1-202ENST00000395736 DHX57Q6P158 1386 aaKnown RBP16.22■□□□□ 0.19
TOM1-202ENST00000395736 SOS2Q07890 1332 aaPredicted RBP16.21■□□□□ 0.19
TOM1-202ENST00000395736 PSDA5PKW4 1024 aaPredicted RBP16.21■□□□□ 0.19
TOM1-202ENST00000395736 GLI3P10071 1580 aa16.21■□□□□ 0.18
TOM1-202ENST00000395736 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.18
TOM1-202ENST00000395736 ADGRB2O60241 1585 aa16.2■□□□□ 0.18
TOM1-202ENST00000395736 KIF1AQ12756 1690 aa16.2■□□□□ 0.18
TOM1-202ENST00000395736 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
TOM1-202ENST00000395736 SIRT1Q96EB6 747 aa16.18■□□□□ 0.18
TOM1-202ENST00000395736 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.17■□□□□ 0.18
TOM1-202ENST00000395736 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
TOM1-202ENST00000395736 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
TOM1-202ENST00000395736 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
TOM1-202ENST00000395736 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
TOM1-202ENST00000395736 GJD4Q96KN9 370 aaPredicted RBP16.15■□□□□ 0.18
TOM1-202ENST00000395736 PRAM1Q96QH2 718 aa16.15■□□□□ 0.18
TOM1-202ENST00000395736 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
TOM1-202ENST00000395736 YY1P25490 414 aa16.14■□□□□ 0.17
TOM1-202ENST00000395736 KDM2AQ9Y2K7 1162 aa16.14■□□□□ 0.17
TOM1-202ENST00000395736 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
TOM1-202ENST00000395736 KIAA1210Q9ULL0 1709 aa16.13■□□□□ 0.17
TOM1-202ENST00000395736 FOXO3O43524 673 aa16.12■□□□□ 0.17
TOM1-202ENST00000395736 XPCQ01831 940 aaPredicted RBP16.12■□□□□ 0.17
TOM1-202ENST00000395736 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
TOM1-202ENST00000395736 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
TOM1-202ENST00000395736 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
TOM1-202ENST00000395736 ABCA3Q99758 1704 aa16.1■□□□□ 0.17
TOM1-202ENST00000395736 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
TOM1-202ENST00000395736 ANKARQ7Z5J8 1434 aa16.09■□□□□ 0.17
TOM1-202ENST00000395736 TULP4Q9NRJ4 1543 aa16.09■□□□□ 0.17
TOM1-202ENST00000395736 UTRNP46939 3433 aa16.09■□□□□ 0.17
TOM1-202ENST00000395736 TRPM3Q9HCF6 1732 aaPredicted RBP16.08■□□□□ 0.16
TOM1-202ENST00000395736 POGKQ9P215 609 aa16.07■□□□□ 0.16
TOM1-202ENST00000395736 SPATA31A3Q5VYP0 1347 aa16.06■□□□□ 0.16
TOM1-202ENST00000395736 PRR36Q9H6K5 1346 aa16.06■□□□□ 0.16
TOM1-202ENST00000395736 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
TOM1-202ENST00000395736 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
TOM1-202ENST00000395736 SLIT2O94813 1529 aa16.05■□□□□ 0.16
TOM1-202ENST00000395736 TNS3Q68CZ2 1445 aa16.05■□□□□ 0.16
TOM1-202ENST00000395736 MINK1Q8N4C8 1332 aaPredicted RBP16.05■□□□□ 0.16
TOM1-202ENST00000395736 SF3B2Q13435 895 aaKnown RBP16.05■□□□□ 0.16
TOM1-202ENST00000395736 ATP7BP35670 1465 aa16.04■□□□□ 0.16
TOM1-202ENST00000395736 TOPAZ1Q8N9V7 1692 aa16.04■□□□□ 0.16
TOM1-202ENST00000395736 ALS2Q96Q42 1657 aa16.04■□□□□ 0.16
TOM1-202ENST00000395736 ITSN1Q15811 1721 aa16.03■□□□□ 0.16
TOM1-202ENST00000395736 R3HDM1Q15032 1099 aaKnown RBP16.03■□□□□ 0.16
TOM1-202ENST00000395736 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
TOM1-202ENST00000395736 SEPT12Q8IYM1 358 aa16.02■□□□□ 0.16
TOM1-202ENST00000395736 CRYBG1Q9Y4K1 1723 aa16.02■□□□□ 0.15
TOM1-202ENST00000395736 SBNO1A3KN83 1393 aa16.01■□□□□ 0.15
TOM1-202ENST00000395736 WASLO00401 505 aaPredicted RBP16.01■□□□□ 0.15
TOM1-202ENST00000395736 NBPF1Q3BBV0 1214 aa16.01■□□□□ 0.15
TOM1-202ENST00000395736 UNC5CLQ8IV45 518 aa16.01■□□□□ 0.15
TOM1-202ENST00000395736 PMFBP1Q8TBY8 1022 aa16.01■□□□□ 0.15
TOM1-202ENST00000395736 TRPM1Q7Z4N2 1603 aa16.01■□□□□ 0.15
TOM1-202ENST00000395736 EIF3AQ14152 1382 aaKnown RBP16■□□□□ 0.15
TOM1-202ENST00000395736 TNS1Q9HBL0 1735 aaKnown RBP16■□□□□ 0.15
TOM1-202ENST00000395736 PLCH1Q4KWH8 1693 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms