RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 SAFB2Q14151 953 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDRT1-203ENST00000395667 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
CDRT1-203ENST00000395667 BCAR3O75815 825 aa12.03□□□□□ -0.48
CDRT1-203ENST00000395667 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
CDRT1-203ENST00000395667 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.48
CDRT1-203ENST00000395667 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.48
CDRT1-203ENST00000395667 IDI1Q13907 227 aa12.02□□□□□ -0.49
CDRT1-203ENST00000395667 CFAP53Q96M91 514 aa12.02□□□□□ -0.49
CDRT1-203ENST00000395667 WWC1Q8IX03 1113 aa12.02□□□□□ -0.49
CDRT1-203ENST00000395667 STK26Q9P289 416 aa12.02□□□□□ -0.49
CDRT1-203ENST00000395667 RRP7AQ9Y3A4 280 aaKnown RBP12.02□□□□□ -0.49
CDRT1-203ENST00000395667 GLI2P10070 1586 aa12.01□□□□□ -0.49
CDRT1-203ENST00000395667 SIGLEC1Q9BZZ2 1709 aa12.01□□□□□ -0.49
CDRT1-203ENST00000395667 CANXP27824 592 aaKnown RBP12.01□□□□□ -0.49
CDRT1-203ENST00000395667 MTHFSP49914 203 aa12.01□□□□□ -0.49
CDRT1-203ENST00000395667 RUNDC1Q96C34 613 aa12.01□□□□□ -0.49
CDRT1-203ENST00000395667 DIP2CQ9Y2E4 1556 aa12.01□□□□□ -0.49
CDRT1-203ENST00000395667 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
CDRT1-203ENST00000395667 SLC52A1Q9NWF4 448 aa12□□□□□ -0.49
CDRT1-203ENST00000395667 TCP11L2Q8N4U5 519 aa12□□□□□ -0.49
CDRT1-203ENST00000395667 NEXMIFQ5QGS0 1516 aa11.99□□□□□ -0.49
CDRT1-203ENST00000395667 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
CDRT1-203ENST00000395667 PUS7Q96PZ0 661 aaKnown RBP11.99□□□□□ -0.49
CDRT1-203ENST00000395667 YEATS2Q9ULM3 1422 aa11.98□□□□□ -0.49
CDRT1-203ENST00000395667 PIK3C2BO00750 1634 aa11.98□□□□□ -0.49
CDRT1-203ENST00000395667 ANKRD36BQ8N2N9 1353 aa11.98□□□□□ -0.49
CDRT1-203ENST00000395667 ARHGAP31Q2M1Z3 1444 aa11.98□□□□□ -0.49
CDRT1-203ENST00000395667 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-203ENST00000395667 ARHGEF28Q8N1W1 1705 aaKnown RBP11.97□□□□□ -0.49
CDRT1-203ENST00000395667 TULP4Q9NRJ4 1543 aa11.97□□□□□ -0.49
CDRT1-203ENST00000395667 RGS3P49796 1198 aa11.97□□□□□ -0.49
CDRT1-203ENST00000395667 U2AF1L5P0DN76 240 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-203ENST00000395667 U2AF1Q01081 240 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDRT1-203ENST00000395667 FRAT1Q92837 279 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-203ENST00000395667 SHPRHQ149N8 1683 aa11.96□□□□□ -0.49
CDRT1-203ENST00000395667 RICTORQ6R327 1708 aa11.96□□□□□ -0.49
CDRT1-203ENST00000395667 NSD2O96028 1365 aa11.96□□□□□ -0.49
CDRT1-203ENST00000395667 USP32Q8NFA0 1604 aa11.96□□□□□ -0.5
CDRT1-203ENST00000395667 PDE3AQ14432 1141 aa11.96□□□□□ -0.5
CDRT1-203ENST00000395667 POGKQ9P215 609 aa11.96□□□□□ -0.5
CDRT1-203ENST00000395667 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.5
CDRT1-203ENST00000395667 CYB5RLQ6IPT4 315 aa11.95□□□□□ -0.5
CDRT1-203ENST00000395667 MINK1Q8N4C8 1332 aaPredicted RBP11.95□□□□□ -0.5
CDRT1-203ENST00000395667 FAM161AQ3B820 660 aa11.95□□□□□ -0.5
CDRT1-203ENST00000395667 PANK1Q8TE04 598 aa11.95□□□□□ -0.5
CDRT1-203ENST00000395667 DDRGK1Q96HY6 314 aa11.95□□□□□ -0.5
CDRT1-203ENST00000395667 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
CDRT1-203ENST00000395667 DEKP35659 375 aaKnown RBP11.94□□□□□ -0.5
CDRT1-203ENST00000395667 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
CDRT1-203ENST00000395667 ZFYVE9O95405 1425 aa11.94□□□□□ -0.5
CDRT1-203ENST00000395667 FBXO31Q5XUX0 539 aaPredicted RBP11.94□□□□□ -0.5
CDRT1-203ENST00000395667 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
CDRT1-203ENST00000395667 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
CDRT1-203ENST00000395667 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
CDRT1-203ENST00000395667 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
CDRT1-203ENST00000395667 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
CDRT1-203ENST00000395667 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
CDRT1-203ENST00000395667 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
CDRT1-203ENST00000395667 IQSEC2Q5JU85 1478 aa11.92□□□□□ -0.5
CDRT1-203ENST00000395667 RARSP54136 660 aaKnown RBP11.92□□□□□ -0.5
CDRT1-203ENST00000395667 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
CDRT1-203ENST00000395667 TERF2IPQ9NYB0 399 aa11.92□□□□□ -0.5
CDRT1-203ENST00000395667 PHF23Q9BUL5 403 aaPredicted RBP11.92□□□□□ -0.5
CDRT1-203ENST00000395667 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
CDRT1-203ENST00000395667 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
CDRT1-203ENST00000395667 CCDC27Q2M243 656 aa11.92□□□□□ -0.5
CDRT1-203ENST00000395667 ATAD2Q6PL18 1390 aa11.91□□□□□ -0.5
CDRT1-203ENST00000395667 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
CDRT1-203ENST00000395667 IGHDP01880 384 aa11.91□□□□□ -0.5
CDRT1-203ENST00000395667 FAM69CQ0P6D2 419 aa11.91□□□□□ -0.5
CDRT1-203ENST00000395667 DAXXQ9UER7 740 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-203ENST00000395667 ABCC11Q96J66 1382 aa11.91□□□□□ -0.5
CDRT1-203ENST00000395667 C8orf34Q49A92 452 aa11.9□□□□□ -0.5
CDRT1-203ENST00000395667 YTHDC2Q9H6S0 1430 aaKnown RBP11.9□□□□□ -0.5
CDRT1-203ENST00000395667 TMEM131LA2VDJ0 1609 aa11.9□□□□□ -0.5
CDRT1-203ENST00000395667 HDGFL2Q7Z4V5 671 aaPredicted RBP11.89□□□□□ -0.51
CDRT1-203ENST00000395667 PTPRMP28827 1452 aa11.89□□□□□ -0.51
CDRT1-203ENST00000395667 MAPK8IP3Q9UPT6 1336 aa11.89□□□□□ -0.51
CDRT1-203ENST00000395667 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
CDRT1-203ENST00000395667 FYB1O15117 783 aa11.88□□□□□ -0.51
CDRT1-203ENST00000395667 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
CDRT1-203ENST00000395667 NEFMP07197 916 aa11.87□□□□□ -0.51
CDRT1-203ENST00000395667 PPM1GO15355 546 aaPredicted RBP11.87□□□□□ -0.51
CDRT1-203ENST00000395667 RLBP1P12271 317 aa11.86□□□□□ -0.51
CDRT1-203ENST00000395667 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
CDRT1-203ENST00000395667 PMFBP1Q8TBY8 1022 aa11.86□□□□□ -0.51
CDRT1-203ENST00000395667 CABP1Q9NZU7 370 aa11.86□□□□□ -0.51
CDRT1-203ENST00000395667 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
CDRT1-203ENST00000395667 MLECQ14165 292 aa11.86□□□□□ -0.51
CDRT1-203ENST00000395667 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
CDRT1-203ENST00000395667 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
CDRT1-203ENST00000395667 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
CDRT1-203ENST00000395667 AAMPQ13685 434 aa11.85□□□□□ -0.51
CDRT1-203ENST00000395667 FTSJ3Q8IY81 847 aaKnown RBP11.85□□□□□ -0.51
CDRT1-203ENST00000395667 ALKQ9UM73 1620 aa11.85□□□□□ -0.51
CDRT1-203ENST00000395667 DIAPH1O60610 1272 aaKnown RBP11.85□□□□□ -0.51
CDRT1-203ENST00000395667 TSPOAP1O95153 1857 aa11.84□□□□□ -0.51
CDRT1-203ENST00000395667 ZKSCAN2Q63HK3 967 aa11.84□□□□□ -0.51
CDRT1-203ENST00000395667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDRT1-203ENST00000395667 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms