RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 NWD1Q149M9 1564 aa19.5■□□□□ 0.71
CDC42SE2-202ENST00000395246 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
CDC42SE2-202ENST00000395246 ZBED9Q6R2W3 1325 aa19.5■□□□□ 0.71
CDC42SE2-202ENST00000395246 FBXO31Q5XUX0 539 aaPredicted RBP19.49■□□□□ 0.71
CDC42SE2-202ENST00000395246 ANKRD36BQ8N2N9 1353 aa19.48■□□□□ 0.71
CDC42SE2-202ENST00000395246 CCDC184Q52MB2 194 aa19.46■□□□□ 0.71
CDC42SE2-202ENST00000395246 PIK3R4Q99570 1358 aa19.45■□□□□ 0.7
CDC42SE2-202ENST00000395246 NLRP13Q86W25 1043 aa19.44■□□□□ 0.7
CDC42SE2-202ENST00000395246 SMG6Q86US8 1419 aaKnown RBP19.43■□□□□ 0.7
CDC42SE2-202ENST00000395246 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
CDC42SE2-202ENST00000395246 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
CDC42SE2-202ENST00000395246 FMN2Q9NZ56 1722 aa19.42■□□□□ 0.7
CDC42SE2-202ENST00000395246 ATAD2Q6PL18 1390 aa19.42■□□□□ 0.7
CDC42SE2-202ENST00000395246 PANK3Q9H999 370 aa19.42■□□□□ 0.7
CDC42SE2-202ENST00000395246 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
CDC42SE2-202ENST00000395246 POLR3AO14802 1390 aaPredicted RBP19.41■□□□□ 0.7
CDC42SE2-202ENST00000395246 MARF1Q9Y4F3 1742 aaKnown RBP19.4■□□□□ 0.7
CDC42SE2-202ENST00000395246 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.7
CDC42SE2-202ENST00000395246 RNF123Q5XPI4 1314 aa19.39■□□□□ 0.69
CDC42SE2-202ENST00000395246 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
CDC42SE2-202ENST00000395246 EVC2Q86UK5 1308 aa19.37■□□□□ 0.69
CDC42SE2-202ENST00000395246 CARD14Q9BXL6 1004 aa19.37■□□□□ 0.69
CDC42SE2-202ENST00000395246 METP08581 1390 aa19.36■□□□□ 0.69
CDC42SE2-202ENST00000395246 HDGFP51858 240 aaKnown RBP19.35■□□□□ 0.69
CDC42SE2-202ENST00000395246 PTPRUQ92729 1446 aa19.35■□□□□ 0.69
CDC42SE2-202ENST00000395246 PHRF1Q9P1Y6 1649 aaKnown RBP19.32■□□□□ 0.68
CDC42SE2-202ENST00000395246 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
CDC42SE2-202ENST00000395246 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
CDC42SE2-202ENST00000395246 RGPD1P0DJD0 1748 aa19.3■□□□□ 0.68
CDC42SE2-202ENST00000395246 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
CDC42SE2-202ENST00000395246 NSD3Q9BZ95 1437 aa19.29■□□□□ 0.68
CDC42SE2-202ENST00000395246 ERICH6BQ5W0A0 696 aa19.29■□□□□ 0.68
CDC42SE2-202ENST00000395246 PPP2R1AP30153 589 aa19.28■□□□□ 0.68
CDC42SE2-202ENST00000395246 ZNF521Q96K83 1311 aa19.27■□□□□ 0.68
CDC42SE2-202ENST00000395246 ANKARQ7Z5J8 1434 aa19.27■□□□□ 0.68
CDC42SE2-202ENST00000395246 A0A1W2PP64 1363 aa19.27■□□□□ 0.68
CDC42SE2-202ENST00000395246 TBX22Q9Y458 520 aa19.27■□□□□ 0.68
CDC42SE2-202ENST00000395246 TMEM132EQ6IEE7 984 aa19.26■□□□□ 0.67
CDC42SE2-202ENST00000395246 NGEFQ8N5V2 710 aa19.26■□□□□ 0.67
CDC42SE2-202ENST00000395246 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
CDC42SE2-202ENST00000395246 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
CDC42SE2-202ENST00000395246 YTHDC1Q96MU7 727 aaKnown RBP19.24■□□□□ 0.67
CDC42SE2-202ENST00000395246 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
CDC42SE2-202ENST00000395246 CGNL1Q0VF96 1302 aa19.24■□□□□ 0.67
CDC42SE2-202ENST00000395246 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
CDC42SE2-202ENST00000395246 MST1RQ04912 1400 aa19.23■□□□□ 0.67
CDC42SE2-202ENST00000395246 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
CDC42SE2-202ENST00000395246 PLEKHH1Q9ULM0 1364 aa19.23■□□□□ 0.67
CDC42SE2-202ENST00000395246 ROBO2Q9HCK4 1378 aa19.22■□□□□ 0.67
CDC42SE2-202ENST00000395246 AATKQ6ZMQ8 1374 aa19.22■□□□□ 0.67
CDC42SE2-202ENST00000395246 CHGAP10645 457 aaKnown RBP19.2■□□□□ 0.66
CDC42SE2-202ENST00000395246 RGPD8O14715 1765 aaPredicted RBP19.2■□□□□ 0.66
CDC42SE2-202ENST00000395246 LTKP29376 864 aa19.2■□□□□ 0.66
CDC42SE2-202ENST00000395246 NKTRP30414 1462 aaKnown RBP19.18■□□□□ 0.66
CDC42SE2-202ENST00000395246 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
CDC42SE2-202ENST00000395246 PRAM1Q96QH2 718 aa19.18■□□□□ 0.66
CDC42SE2-202ENST00000395246 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
CDC42SE2-202ENST00000395246 PIK3C2AO00443 1686 aa19.18■□□□□ 0.66
CDC42SE2-202ENST00000395246 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE2-202ENST00000395246 TRMT2AQ8IZ69 625 aaKnown RBP19.16■□□□□ 0.66
CDC42SE2-202ENST00000395246 THEMISQ8N1K5 641 aaPredicted RBP19.16■□□□□ 0.66
CDC42SE2-202ENST00000395246 ESF1Q9H501 851 aaKnown RBP19.16■□□□□ 0.66
CDC42SE2-202ENST00000395246 TMC1Q8TDI8 760 aa19.16■□□□□ 0.66
CDC42SE2-202ENST00000395246 KIF1AQ12756 1690 aa19.15■□□□□ 0.66
CDC42SE2-202ENST00000395246 NCOA3Q9Y6Q9 1424 aa19.15■□□□□ 0.66
CDC42SE2-202ENST00000395246 TRPM3Q9HCF6 1732 aaPredicted RBP19.15■□□□□ 0.66
CDC42SE2-202ENST00000395246 OVOS2A0A0J9YW53 1432 aa19.15■□□□□ 0.66
CDC42SE2-202ENST00000395246 OVOS2Q6IE36 1432 aa19.15■□□□□ 0.66
CDC42SE2-202ENST00000395246 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
CDC42SE2-202ENST00000395246 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
CDC42SE2-202ENST00000395246 STRCP1A6NGW2 1772 aa19.13■□□□□ 0.65
CDC42SE2-202ENST00000395246 CAMTA1Q9Y6Y1 1673 aa19.13■□□□□ 0.65
CDC42SE2-202ENST00000395246 PLEKHG3A1L390 1219 aa19.12■□□□□ 0.65
CDC42SE2-202ENST00000395246 PPIP5K1Q6PFW1 1433 aa19.12■□□□□ 0.65
CDC42SE2-202ENST00000395246 PEAK1Q9H792 1746 aa19.12■□□□□ 0.65
CDC42SE2-202ENST00000395246 USP31Q70CQ4 1352 aa19.12■□□□□ 0.65
CDC42SE2-202ENST00000395246 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
CDC42SE2-202ENST00000395246 SUPT16HQ9Y5B9 1047 aaKnown RBP19.11■□□□□ 0.65
CDC42SE2-202ENST00000395246 CDK19Q9BWU1 502 aa19.11■□□□□ 0.65
CDC42SE2-202ENST00000395246 NUDCQ9Y266 331 aa19.11■□□□□ 0.65
CDC42SE2-202ENST00000395246 XIRP1Q702N8 1843 aaKnown RBP19.1■□□□□ 0.65
CDC42SE2-202ENST00000395246 CRYBG1Q9Y4K1 1723 aa19.09■□□□□ 0.65
CDC42SE2-202ENST00000395246 MLECQ14165 292 aa19.08■□□□□ 0.65
CDC42SE2-202ENST00000395246 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
CDC42SE2-202ENST00000395246 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
CDC42SE2-202ENST00000395246 USP6P35125 1406 aa19.07■□□□□ 0.64
CDC42SE2-202ENST00000395246 STRCQ7RTU9 1775 aa19.07■□□□□ 0.64
CDC42SE2-202ENST00000395246 CC2D1BQ5T0F9 858 aaKnown RBP19.06■□□□□ 0.64
CDC42SE2-202ENST00000395246 STAG3Q9UJ98 1225 aa19.06■□□□□ 0.64
CDC42SE2-202ENST00000395246 NUTM2DQ5VT03 806 aaPredicted RBP19.05■□□□□ 0.64
CDC42SE2-202ENST00000395246 PRR36Q9H6K5 1346 aa19.05■□□□□ 0.64
CDC42SE2-202ENST00000395246 CABP2Q9NPB3 220 aa19.05■□□□□ 0.64
CDC42SE2-202ENST00000395246 EID1Q9Y6B2 187 aa19.05■□□□□ 0.64
CDC42SE2-202ENST00000395246 FYB1O15117 783 aa19.04■□□□□ 0.64
CDC42SE2-202ENST00000395246 FAM9BQ8IZU0 186 aa19.04■□□□□ 0.64
CDC42SE2-202ENST00000395246 ALS2Q96Q42 1657 aa19.04■□□□□ 0.64
CDC42SE2-202ENST00000395246 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
CDC42SE2-202ENST00000395246 LMTK3Q96Q04 1460 aa19.04■□□□□ 0.64
CDC42SE2-202ENST00000395246 ADGRL3Q9HAR2 1447 aa19.04■□□□□ 0.64
CDC42SE2-202ENST00000395246 DCCP43146 1447 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms