RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 TMEM132EQ6IEE7 984 aa28.66■■■□□ 2.18
COL11A2-204ENST00000395194 SOS2Q07890 1332 aaPredicted RBP28.66■■■□□ 2.18
COL11A2-204ENST00000395194 KNDC1Q76NI1 1749 aa28.66■■■□□ 2.18
COL11A2-204ENST00000395194 WAPLQ7Z5K2 1190 aa28.65■■■□□ 2.18
COL11A2-204ENST00000395194 NUTM2FA1L443 756 aa28.64■■■□□ 2.18
COL11A2-204ENST00000395194 ESCO1Q5FWF5 840 aa28.64■■■□□ 2.18
COL11A2-204ENST00000395194 PIK3C2GO75747 1445 aa28.63■■■□□ 2.17
COL11A2-204ENST00000395194 LRPPRCP42704 1394 aaKnown RBP28.62■■■□□ 2.17
COL11A2-204ENST00000395194 PLEKHH1Q9ULM0 1364 aa28.62■■■□□ 2.17
COL11A2-204ENST00000395194 TECPR2O15040 1411 aa28.61■■■□□ 2.17
COL11A2-204ENST00000395194 UPF1Q92900 1129 aaKnown RBP eCLIP28.61■■■□□ 2.17
COL11A2-204ENST00000395194 NGLY1Q96IV0 654 aa28.6■■■□□ 2.17
COL11A2-204ENST00000395194 CDK12Q9NYV4 1490 aaPredicted RBP28.59■■■□□ 2.17
COL11A2-204ENST00000395194 XPCQ01831 940 aaPredicted RBP28.59■■■□□ 2.17
COL11A2-204ENST00000395194 QTRT2Q9H974 415 aaKnown RBP28.59■■■□□ 2.17
COL11A2-204ENST00000395194 COL22A1Q8NFW1 1626 aaPredicted RBP28.58■■■□□ 2.17
COL11A2-204ENST00000395194 RGS12O14924 1447 aa28.57■■■□□ 2.16
COL11A2-204ENST00000395194 YTHDC2Q9H6S0 1430 aaKnown RBP28.57■■■□□ 2.16
COL11A2-204ENST00000395194 FMN2Q9NZ56 1722 aa28.57■■■□□ 2.16
COL11A2-204ENST00000395194 NPHP3Q7Z494 1330 aa28.56■■■□□ 2.16
COL11A2-204ENST00000395194 ABCC11Q96J66 1382 aa28.56■■■□□ 2.16
COL11A2-204ENST00000395194 PXDNQ92626 1479 aa28.55■■■□□ 2.16
COL11A2-204ENST00000395194 FOXO3O43524 673 aa28.55■■■□□ 2.16
COL11A2-204ENST00000395194 RBM6P78332 1123 aaKnown RBP28.54■■■□□ 2.16
COL11A2-204ENST00000395194 RAB3GAP2Q9H2M9 1393 aa28.53■■■□□ 2.16
COL11A2-204ENST00000395194 RGPD8O14715 1765 aaPredicted RBP28.53■■■□□ 2.16
COL11A2-204ENST00000395194 MARF1Q9Y4F3 1742 aaKnown RBP28.51■■■□□ 2.15
COL11A2-204ENST00000395194 CFAP70Q5T0N1 1121 aa28.5■■■□□ 2.15
COL11A2-204ENST00000395194 USP21Q9UK80 565 aa28.5■■■□□ 2.15
COL11A2-204ENST00000395194 MYOM2P54296 1465 aa28.49■■■□□ 2.15
COL11A2-204ENST00000395194 NRXN1Q9ULB1 1477 aa28.48■■■□□ 2.15
COL11A2-204ENST00000395194 C14orf93Q9H972 538 aaKnown RBP28.48■■■□□ 2.15
COL11A2-204ENST00000395194 KIF1AQ12756 1690 aa28.47■■■□□ 2.15
COL11A2-204ENST00000395194 SAFB2Q14151 953 aaKnown RBP eCLIP28.46■■■□□ 2.15
COL11A2-204ENST00000395194 ACIN1Q9UKV3 1341 aaKnown RBP28.45■■■□□ 2.15
COL11A2-204ENST00000395194 DHX57Q6P158 1386 aaKnown RBP28.43■■■□□ 2.14
COL11A2-204ENST00000395194 FNBP4Q8N3X1 1017 aaPredicted RBP28.42■■■□□ 2.14
COL11A2-204ENST00000395194 TRPC5Q9UL62 973 aaPredicted RBP28.42■■■□□ 2.14
COL11A2-204ENST00000395194 ATRNO75882 1429 aa28.41■■■□□ 2.14
COL11A2-204ENST00000395194 PRAM1Q96QH2 718 aa28.4■■■□□ 2.14
COL11A2-204ENST00000395194 SIRT1Q96EB6 747 aa28.38■■■□□ 2.13
COL11A2-204ENST00000395194 SPATA31A3Q5VYP0 1347 aa28.37■■■□□ 2.13
COL11A2-204ENST00000395194 BCL9LQ86UU0 1499 aa28.36■■■□□ 2.13
COL11A2-204ENST00000395194 PLEKHG5O94827 1062 aa28.36■■■□□ 2.13
COL11A2-204ENST00000395194 KRT28Q7Z3Y7 464 aa28.36■■■□□ 2.13
COL11A2-204ENST00000395194 PHF8Q9UPP1 1060 aa28.35■■■□□ 2.13
COL11A2-204ENST00000395194 POGKQ9P215 609 aa28.34■■■□□ 2.13
COL11A2-204ENST00000395194 KDM2AQ9Y2K7 1162 aa28.34■■■□□ 2.13
COL11A2-204ENST00000395194 ADGRB1O14514 1584 aa28.33■■■□□ 2.13
COL11A2-204ENST00000395194 USP32Q8NFA0 1604 aa28.33■■■□□ 2.13
COL11A2-204ENST00000395194 DLC1Q96QB1 1528 aa28.33■■■□□ 2.13
COL11A2-204ENST00000395194 TRAK1Q9UPV9 953 aa28.31■■■□□ 2.12
COL11A2-204ENST00000395194 ATAD2Q6PL18 1390 aa28.31■■■□□ 2.12
COL11A2-204ENST00000395194 TNS3Q68CZ2 1445 aa28.31■■■□□ 2.12
COL11A2-204ENST00000395194 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.31■■■□□ 2.12
COL11A2-204ENST00000395194 EP400Q96L91 3159 aa28.3■■■□□ 2.12
COL11A2-204ENST00000395194 DCAF11Q8TEB1 546 aa28.29■■■□□ 2.12
COL11A2-204ENST00000395194 HIRIP3Q9BW71 556 aaPredicted RBP28.29■■■□□ 2.12
COL11A2-204ENST00000395194 ABCA3Q99758 1704 aa28.29■■■□□ 2.12
COL11A2-204ENST00000395194 ADGRB2O60241 1585 aa28.28■■■□□ 2.12
COL11A2-204ENST00000395194 HAP1P54257 671 aaPredicted RBP28.28■■■□□ 2.12
COL11A2-204ENST00000395194 LMOD2Q6P5Q4 547 aa28.28■■■□□ 2.12
COL11A2-204ENST00000395194 PMFBP1Q8TBY8 1022 aa28.28■■■□□ 2.12
COL11A2-204ENST00000395194 CABLES1Q8TDN4 633 aa28.28■■■□□ 2.12
COL11A2-204ENST00000395194 MINK1Q8N4C8 1332 aaPredicted RBP28.26■■■□□ 2.11
COL11A2-204ENST00000395194 SLIT2O94813 1529 aa28.26■■■□□ 2.11
COL11A2-204ENST00000395194 PSME1Q06323 249 aa28.25■■■□□ 2.11
COL11A2-204ENST00000395194 GJD4Q96KN9 370 aaPredicted RBP28.25■■■□□ 2.11
COL11A2-204ENST00000395194 GLI3P10071 1580 aa28.24■■■□□ 2.11
COL11A2-204ENST00000395194 PLCH1Q4KWH8 1693 aa28.24■■■□□ 2.11
COL11A2-204ENST00000395194 UNC5CLQ8IV45 518 aa28.23■■■□□ 2.11
COL11A2-204ENST00000395194 ANKARQ7Z5J8 1434 aa28.23■■■□□ 2.11
COL11A2-204ENST00000395194 RALGAPBQ86X10 1494 aa28.21■■■□□ 2.11
COL11A2-204ENST00000395194 SBNO1A3KN83 1393 aa28.21■■■□□ 2.11
COL11A2-204ENST00000395194 TRPM3Q9HCF6 1732 aaPredicted RBP28.21■■■□□ 2.11
COL11A2-204ENST00000395194 BRWD3Q6RI45 1802 aa28.2■■■□□ 2.11
COL11A2-204ENST00000395194 ARHGEF28Q8N1W1 1705 aaKnown RBP28.2■■■□□ 2.1
COL11A2-204ENST00000395194 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
COL11A2-204ENST00000395194 ARHGEF10O15013 1369 aa28.17■■■□□ 2.1
COL11A2-204ENST00000395194 NWD2Q9ULI1 1742 aa28.17■■■□□ 2.1
COL11A2-204ENST00000395194 TULP4Q9NRJ4 1543 aa28.17■■■□□ 2.1
COL11A2-204ENST00000395194 ALS2Q96Q42 1657 aa28.14■■■□□ 2.1
COL11A2-204ENST00000395194 WASLO00401 505 aaPredicted RBP28.13■■■□□ 2.09
COL11A2-204ENST00000395194 CCDC9Q9Y3X0 531 aaKnown RBP28.13■■■□□ 2.09
COL11A2-204ENST00000395194 EIF3AQ14152 1382 aaKnown RBP28.12■■■□□ 2.09
COL11A2-204ENST00000395194 HRCP23327 699 aa28.12■■■□□ 2.09
COL11A2-204ENST00000395194 GPRASP1Q5JY77 1395 aa28.11■■■□□ 2.09
COL11A2-204ENST00000395194 ITSN1Q15811 1721 aa28.1■■■□□ 2.09
COL11A2-204ENST00000395194 SRCAPQ6ZRS2 3230 aa28.09■■■□□ 2.09
COL11A2-204ENST00000395194 NRAPQ86VF7 1730 aa28.09■■■□□ 2.09
COL11A2-204ENST00000395194 VPS72Q15906 364 aa28.08■■■□□ 2.09
COL11A2-204ENST00000395194 NGDNQ8NEJ9 315 aaKnown RBP28.08■■■□□ 2.09
COL11A2-204ENST00000395194 STAC3Q96MF2 364 aa28.08■■■□□ 2.09
COL11A2-204ENST00000395194 FAM83GA6ND36 823 aa28.07■■■□□ 2.08
COL11A2-204ENST00000395194 SEPT12Q8IYM1 358 aa28.06■■■□□ 2.08
COL11A2-204ENST00000395194 ATP7BP35670 1465 aa28.06■■■□□ 2.08
COL11A2-204ENST00000395194 CRYBG1Q9Y4K1 1723 aa28.06■■■□□ 2.08
COL11A2-204ENST00000395194 PAK3O75914 559 aaPredicted RBP28.05■■■□□ 2.08
COL11A2-204ENST00000395194 COL14A1Q05707 1796 aaKnown RBP28.04■■■□□ 2.08
COL11A2-204ENST00000395194 KIAA1210Q9ULL0 1709 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms