RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 FAM135BQ49AJ0 1406 aa18.08■□□□□ 0.48
VPS26A-203ENST00000395098 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
VPS26A-203ENST00000395098 CABP2Q9NPB3 220 aa18.07■□□□□ 0.48
VPS26A-203ENST00000395098 HSPA2P54652 639 aa18.07■□□□□ 0.48
VPS26A-203ENST00000395098 NPHP4O75161 1426 aaPredicted RBP18.07■□□□□ 0.48
VPS26A-203ENST00000395098 CNGB1Q14028 1251 aaPredicted RBP18.06■□□□□ 0.48
VPS26A-203ENST00000395098 PRKRIP1Q9H875 184 aaPredicted RBP18.05■□□□□ 0.48
VPS26A-203ENST00000395098 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
VPS26A-203ENST00000395098 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
VPS26A-203ENST00000395098 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
VPS26A-203ENST00000395098 SLC12A5Q9H2X9 1139 aa18.03■□□□□ 0.48
VPS26A-203ENST00000395098 LMTK3Q96Q04 1460 aa18.03■□□□□ 0.48
VPS26A-203ENST00000395098 KCNA6P17658 529 aa18.02■□□□□ 0.48
VPS26A-203ENST00000395098 PIK3R4Q99570 1358 aa18.02■□□□□ 0.48
VPS26A-203ENST00000395098 TMC1Q8TDI8 760 aa18.02■□□□□ 0.47
VPS26A-203ENST00000395098 XRN1Q8IZH2 1706 aaKnown RBP18.02■□□□□ 0.47
VPS26A-203ENST00000395098 PTCH1Q13635 1447 aa18.01■□□□□ 0.47
VPS26A-203ENST00000395098 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
VPS26A-203ENST00000395098 CARD14Q9BXL6 1004 aa17.99■□□□□ 0.47
VPS26A-203ENST00000395098 WASLO00401 505 aaPredicted RBP17.99■□□□□ 0.47
VPS26A-203ENST00000395098 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
VPS26A-203ENST00000395098 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
VPS26A-203ENST00000395098 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
VPS26A-203ENST00000395098 CHD2O14647 1828 aaKnown RBP17.96■□□□□ 0.47
VPS26A-203ENST00000395098 ATAD2Q6PL18 1390 aa17.96■□□□□ 0.47
VPS26A-203ENST00000395098 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
VPS26A-203ENST00000395098 AMER1Q5JTC6 1135 aaPredicted RBP17.95■□□□□ 0.46
VPS26A-203ENST00000395098 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
VPS26A-203ENST00000395098 ADGRB2O60241 1585 aa17.94■□□□□ 0.46
VPS26A-203ENST00000395098 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
VPS26A-203ENST00000395098 CABP1Q9NZU7 370 aa17.93■□□□□ 0.46
VPS26A-203ENST00000395098 PARD3Q8TEW0 1356 aa17.92■□□□□ 0.46
VPS26A-203ENST00000395098 PRR36Q9H6K5 1346 aa17.92■□□□□ 0.46
VPS26A-203ENST00000395098 CD163L1Q9NR16 1453 aa17.92■□□□□ 0.46
VPS26A-203ENST00000395098 ANKRD36BQ8N2N9 1353 aa17.92■□□□□ 0.46
VPS26A-203ENST00000395098 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
VPS26A-203ENST00000395098 NINLQ9Y2I6 1382 aa17.92■□□□□ 0.46
VPS26A-203ENST00000395098 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
VPS26A-203ENST00000395098 NSD3Q9BZ95 1437 aa17.91■□□□□ 0.46
VPS26A-203ENST00000395098 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
VPS26A-203ENST00000395098 RALBP1Q15311 655 aa17.9■□□□□ 0.46
VPS26A-203ENST00000395098 NUTM2FA1L443 756 aa17.9■□□□□ 0.46
VPS26A-203ENST00000395098 STRCQ7RTU9 1775 aa17.9■□□□□ 0.46
VPS26A-203ENST00000395098 ATP7BP35670 1465 aa17.9■□□□□ 0.46
VPS26A-203ENST00000395098 NWD1Q149M9 1564 aa17.89■□□□□ 0.45
VPS26A-203ENST00000395098 PPIP5K1Q6PFW1 1433 aa17.88■□□□□ 0.45
VPS26A-203ENST00000395098 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
VPS26A-203ENST00000395098 NPC1L1Q9UHC9 1359 aa17.87■□□□□ 0.45
VPS26A-203ENST00000395098 MYBBP1AQ9BQG0 1328 aaKnown RBP17.87■□□□□ 0.45
VPS26A-203ENST00000395098 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
VPS26A-203ENST00000395098 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
VPS26A-203ENST00000395098 NALCNQ8IZF0 1738 aa17.85■□□□□ 0.45
VPS26A-203ENST00000395098 USP32Q8NFA0 1604 aa17.84■□□□□ 0.45
VPS26A-203ENST00000395098 HDGFL2Q7Z4V5 671 aaPredicted RBP17.84■□□□□ 0.45
VPS26A-203ENST00000395098 CPSF1Q10570 1443 aaKnown RBP17.83■□□□□ 0.45
VPS26A-203ENST00000395098 STRCP1A6NGW2 1772 aa17.83■□□□□ 0.44
VPS26A-203ENST00000395098 PROSER2Q86WR7 435 aaPredicted RBP17.83■□□□□ 0.44
VPS26A-203ENST00000395098 ADGRL3Q9HAR2 1447 aa17.82■□□□□ 0.44
VPS26A-203ENST00000395098 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
VPS26A-203ENST00000395098 TOPAZ1Q8N9V7 1692 aa17.82■□□□□ 0.44
VPS26A-203ENST00000395098 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
VPS26A-203ENST00000395098 CDC42BPGQ6DT37 1551 aa17.81■□□□□ 0.44
VPS26A-203ENST00000395098 NLRP13Q86W25 1043 aa17.8■□□□□ 0.44
VPS26A-203ENST00000395098 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
VPS26A-203ENST00000395098 PPP2R1AP30153 589 aa17.8■□□□□ 0.44
VPS26A-203ENST00000395098 BRD4O60885 1362 aaPredicted RBP17.79■□□□□ 0.44
VPS26A-203ENST00000395098 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
VPS26A-203ENST00000395098 FMN2Q9NZ56 1722 aa17.79■□□□□ 0.44
VPS26A-203ENST00000395098 ACEP12821 1306 aa17.78■□□□□ 0.44
VPS26A-203ENST00000395098 FYB1O15117 783 aa17.78■□□□□ 0.44
VPS26A-203ENST00000395098 PMFBP1Q8TBY8 1022 aa17.78■□□□□ 0.44
VPS26A-203ENST00000395098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.78■□□□□ 0.44
VPS26A-203ENST00000395098 GGNBP2Q9H3C7 697 aa17.78■□□□□ 0.44
VPS26A-203ENST00000395098 TMEM94Q12767 1356 aa17.77■□□□□ 0.44
VPS26A-203ENST00000395098 FAM9BQ8IZU0 186 aa17.77■□□□□ 0.44
VPS26A-203ENST00000395098 ANKARQ7Z5J8 1434 aa17.77■□□□□ 0.44
VPS26A-203ENST00000395098 RGPD8O14715 1765 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-203ENST00000395098 ZNF335Q9H4Z2 1342 aaPredicted RBP17.77■□□□□ 0.43
VPS26A-203ENST00000395098 MORC1Q86VD1 984 aa17.77■□□□□ 0.43
VPS26A-203ENST00000395098 TNNT2P45379 298 aaPredicted RBP17.76■□□□□ 0.43
VPS26A-203ENST00000395098 EDC4Q6P2E9 1401 aaKnown RBP17.75■□□□□ 0.43
VPS26A-203ENST00000395098 NSD2O96028 1365 aa17.75■□□□□ 0.43
VPS26A-203ENST00000395098 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
VPS26A-203ENST00000395098 AKAP12Q02952 1782 aa17.74■□□□□ 0.43
VPS26A-203ENST00000395098 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
VPS26A-203ENST00000395098 MON2Q7Z3U7 1717 aa17.74■□□□□ 0.43
VPS26A-203ENST00000395098 ITSN1Q15811 1721 aa17.73■□□□□ 0.43
VPS26A-203ENST00000395098 POLR3AO14802 1390 aaPredicted RBP17.73■□□□□ 0.43
VPS26A-203ENST00000395098 NME9Q86XW9 330 aa17.73■□□□□ 0.43
VPS26A-203ENST00000395098 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
VPS26A-203ENST00000395098 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
VPS26A-203ENST00000395098 USP6P35125 1406 aa17.72■□□□□ 0.43
VPS26A-203ENST00000395098 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.43
VPS26A-203ENST00000395098 TTC21BQ7Z4L5 1316 aa17.7■□□□□ 0.42
VPS26A-203ENST00000395098 SSH2Q76I76 1423 aa17.7■□□□□ 0.42
VPS26A-203ENST00000395098 NRKQ7Z2Y5 1582 aa17.7■□□□□ 0.42
VPS26A-203ENST00000395098 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
VPS26A-203ENST00000395098 LRRC7Q96NW7 1537 aa17.69■□□□□ 0.42
VPS26A-203ENST00000395098 PHF8Q9UPP1 1060 aa17.69■□□□□ 0.42
VPS26A-203ENST00000395098 KIF20BQ96Q89 1820 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms