RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 PLEKHH1Q9ULM0 1364 aa33.83■■■■□ 3.01
CTF1-202ENST00000395019 CDCA8Q53HL2 280 aa33.82■■■■□ 3.01
CTF1-202ENST00000395019 CENPJQ9HC77 1338 aaPredicted RBP33.82■■■■□ 3
CTF1-202ENST00000395019 XIRP1Q702N8 1843 aaKnown RBP33.81■■■■□ 3
CTF1-202ENST00000395019 PTCH1Q13635 1447 aa33.81■■■■□ 3
CTF1-202ENST00000395019 QRICH2Q9H0J4 1663 aa33.8■■■■□ 3
CTF1-202ENST00000395019 WAPLQ7Z5K2 1190 aa33.8■■■■□ 3
CTF1-202ENST00000395019 RBM33Q96EV2 1170 aaKnown RBP33.79■■■■□ 3
CTF1-202ENST00000395019 NKTRP30414 1462 aaKnown RBP33.79■■■■□ 3
CTF1-202ENST00000395019 LTBP4Q8N2S1 1624 aa33.78■■■■□ 3
CTF1-202ENST00000395019 PRAM1Q96QH2 718 aa33.77■■■■□ 3
CTF1-202ENST00000395019 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.77■■■■□ 3
CTF1-202ENST00000395019 SAFB2Q14151 953 aaKnown RBP eCLIP33.75■■■□□ 2.99
CTF1-202ENST00000395019 FAM135BQ49AJ0 1406 aa33.75■■■□□ 2.99
CTF1-202ENST00000395019 PRKRIP1Q9H875 184 aaPredicted RBP33.74■■■□□ 2.99
CTF1-202ENST00000395019 NALCNQ8IZF0 1738 aa33.73■■■□□ 2.99
CTF1-202ENST00000395019 LRRC7Q96NW7 1537 aa33.71■■■□□ 2.99
CTF1-202ENST00000395019 SIRT1Q96EB6 747 aa33.69■■■□□ 2.98
CTF1-202ENST00000395019 POGKQ9P215 609 aa33.69■■■□□ 2.98
CTF1-202ENST00000395019 PROSER2Q86WR7 435 aaPredicted RBP33.68■■■□□ 2.98
CTF1-202ENST00000395019 TMEM94Q12767 1356 aa33.66■■■□□ 2.98
CTF1-202ENST00000395019 YTHDC1Q96MU7 727 aaKnown RBP33.64■■■□□ 2.98
CTF1-202ENST00000395019 MINK1Q8N4C8 1332 aaPredicted RBP33.63■■■□□ 2.97
CTF1-202ENST00000395019 PER1O15534 1290 aaPredicted RBP33.62■■■□□ 2.97
CTF1-202ENST00000395019 PANK3Q9H999 370 aa33.61■■■□□ 2.97
CTF1-202ENST00000395019 ADGRB2O60241 1585 aa33.59■■■□□ 2.97
CTF1-202ENST00000395019 MYOM1P52179 1685 aa33.59■■■□□ 2.97
CTF1-202ENST00000395019 TULP4Q9NRJ4 1543 aa33.59■■■□□ 2.97
CTF1-202ENST00000395019 ADGRL3Q9HAR2 1447 aa33.58■■■□□ 2.97
CTF1-202ENST00000395019 PUS7Q96PZ0 661 aaKnown RBP33.57■■■□□ 2.97
CTF1-202ENST00000395019 KTN1Q86UP2 1357 aaKnown RBP33.55■■■□□ 2.96
CTF1-202ENST00000395019 EVC2Q86UK5 1308 aa33.55■■■□□ 2.96
CTF1-202ENST00000395019 CENPBP07199 599 aaPredicted RBP33.52■■■□□ 2.96
CTF1-202ENST00000395019 C14orf37Q86TY3 774 aa33.52■■■□□ 2.96
CTF1-202ENST00000395019 CDC42BPGQ6DT37 1551 aa33.51■■■□□ 2.96
CTF1-202ENST00000395019 NCOA3Q9Y6Q9 1424 aa33.51■■■□□ 2.95
CTF1-202ENST00000395019 FMN2Q9NZ56 1722 aa33.5■■■□□ 2.95
CTF1-202ENST00000395019 RGPD8O14715 1765 aaPredicted RBP33.5■■■□□ 2.95
CTF1-202ENST00000395019 RALBP1Q15311 655 aa33.5■■■□□ 2.95
CTF1-202ENST00000395019 USP32Q8NFA0 1604 aa33.47■■■□□ 2.95
CTF1-202ENST00000395019 C19orf44Q9H6X5 657 aa33.45■■■□□ 2.95
CTF1-202ENST00000395019 WASLO00401 505 aaPredicted RBP33.44■■■□□ 2.94
CTF1-202ENST00000395019 PARD3Q8TEW0 1356 aa33.44■■■□□ 2.94
CTF1-202ENST00000395019 CDK19Q9BWU1 502 aa33.43■■■□□ 2.94
CTF1-202ENST00000395019 MSH6P52701 1360 aa33.43■■■□□ 2.94
CTF1-202ENST00000395019 CNGB1Q14028 1251 aaPredicted RBP33.42■■■□□ 2.94
CTF1-202ENST00000395019 KNSTRNQ9Y448 316 aa33.42■■■□□ 2.94
CTF1-202ENST00000395019 NUTM2FA1L443 756 aa33.42■■■□□ 2.94
CTF1-202ENST00000395019 CCDC184Q52MB2 194 aa33.42■■■□□ 2.94
CTF1-202ENST00000395019 CABP2Q9NPB3 220 aa33.42■■■□□ 2.94
CTF1-202ENST00000395019 MRS2Q9HD23 443 aa33.39■■■□□ 2.94
CTF1-202ENST00000395019 DCCP43146 1447 aa33.39■■■□□ 2.94
CTF1-202ENST00000395019 MYBBP1AQ9BQG0 1328 aaKnown RBP33.39■■■□□ 2.94
CTF1-202ENST00000395019 PRR36Q9H6K5 1346 aa33.38■■■□□ 2.93
CTF1-202ENST00000395019 NPC1L1Q9UHC9 1359 aa33.37■■■□□ 2.93
CTF1-202ENST00000395019 ATP7BP35670 1465 aa33.37■■■□□ 2.93
CTF1-202ENST00000395019 TOPAZ1Q8N9V7 1692 aa33.36■■■□□ 2.93
CTF1-202ENST00000395019 SRPK2P78362 688 aaKnown RBP33.36■■■□□ 2.93
CTF1-202ENST00000395019 AMER1Q5JTC6 1135 aaPredicted RBP33.36■■■□□ 2.93
CTF1-202ENST00000395019 ATAD2Q6PL18 1390 aa33.35■■■□□ 2.93
CTF1-202ENST00000395019 NINLQ9Y2I6 1382 aa33.35■■■□□ 2.93
CTF1-202ENST00000395019 MST1RQ04912 1400 aa33.35■■■□□ 2.93
CTF1-202ENST00000395019 CERKQ8TCT0 537 aa33.35■■■□□ 2.93
CTF1-202ENST00000395019 TMC1Q8TDI8 760 aa33.35■■■□□ 2.93
CTF1-202ENST00000395019 SLC12A5Q9H2X9 1139 aa33.35■■■□□ 2.93
CTF1-202ENST00000395019 CC2D1BQ5T0F9 858 aaKnown RBP33.34■■■□□ 2.93
CTF1-202ENST00000395019 ATF3P18847 181 aa33.33■■■□□ 2.93
CTF1-202ENST00000395019 CARD14Q9BXL6 1004 aa33.32■■■□□ 2.92
CTF1-202ENST00000395019 ITSN1Q15811 1721 aa33.31■■■□□ 2.92
CTF1-202ENST00000395019 BRD4O60885 1362 aaPredicted RBP33.3■■■□□ 2.92
CTF1-202ENST00000395019 CADPS2Q86UW7 1296 aa33.3■■■□□ 2.92
CTF1-202ENST00000395019 IQSEC2Q5JU85 1478 aa33.29■■■□□ 2.92
CTF1-202ENST00000395019 NUDT16Q96DE0 195 aaKnown RBP33.29■■■□□ 2.92
CTF1-202ENST00000395019 C1orf167Q5SNV9 1468 aa33.29■■■□□ 2.92
CTF1-202ENST00000395019 ANKRD36BQ8N2N9 1353 aa33.27■■■□□ 2.92
CTF1-202ENST00000395019 ANKARQ7Z5J8 1434 aa33.27■■■□□ 2.92
CTF1-202ENST00000395019 NLRP13Q86W25 1043 aa33.26■■■□□ 2.91
CTF1-202ENST00000395019 NSD3Q9BZ95 1437 aa33.23■■■□□ 2.91
CTF1-202ENST00000395019 ORAI2Q96SN7 254 aa33.22■■■□□ 2.91
CTF1-202ENST00000395019 PPIP5K1Q6PFW1 1433 aa33.22■■■□□ 2.91
CTF1-202ENST00000395019 SLAIN2Q9P270 581 aa33.21■■■□□ 2.91
CTF1-202ENST00000395019 CCDC61Q9Y6R9 512 aa33.19■■■□□ 2.9
CTF1-202ENST00000395019 FAM9BQ8IZU0 186 aa33.18■■■□□ 2.9
CTF1-202ENST00000395019 CABP1Q9NZU7 370 aa33.18■■■□□ 2.9
CTF1-202ENST00000395019 ROBO1Q9Y6N7 1651 aa33.18■■■□□ 2.9
CTF1-202ENST00000395019 ESCO1Q5FWF5 840 aa33.17■■■□□ 2.9
CTF1-202ENST00000395019 PMFBP1Q8TBY8 1022 aa33.17■■■□□ 2.9
CTF1-202ENST00000395019 AKAP12Q02952 1782 aa33.16■■■□□ 2.9
CTF1-202ENST00000395019 CD163L1Q9NR16 1453 aa33.16■■■□□ 2.9
CTF1-202ENST00000395019 PNISRQ8TF01 805 aaKnown RBP33.16■■■□□ 2.9
CTF1-202ENST00000395019 TERF2IPQ9NYB0 399 aa33.15■■■□□ 2.9
CTF1-202ENST00000395019 A0A1W2PP64 1363 aa33.15■■■□□ 2.9
CTF1-202ENST00000395019 KIF1AQ12756 1690 aa33.15■■■□□ 2.9
CTF1-202ENST00000395019 UBAP1LF5GYI3 381 aa33.14■■■□□ 2.9
CTF1-202ENST00000395019 BRINP3Q76B58 766 aa33.13■■■□□ 2.89
CTF1-202ENST00000395019 CGNL1Q0VF96 1302 aa33.12■■■□□ 2.89
CTF1-202ENST00000395019 PPP2R1AP30153 589 aa33.12■■■□□ 2.89
CTF1-202ENST00000395019 PHF8Q9UPP1 1060 aa33.12■■■□□ 2.89
CTF1-202ENST00000395019 PLEKHG3A1L390 1219 aa33.1■■■□□ 2.89
CTF1-202ENST00000395019 TOM1O60784 492 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms