RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 SLC24A1O60721 1099 aa17.04■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 STRCP1A6NGW2 1772 aa17.04■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 SAFB2Q14151 953 aaKnown RBP eCLIP17.01■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 TMEM94Q12767 1356 aa17.01■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 ILDR2Q71H61 639 aa17■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 LRRC7Q96NW7 1537 aa17■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 HSPA5P11021 654 aaKnown RBP16.99■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 QRICH2Q9H0J4 1663 aa16.99■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 DISP3Q9P2K9 1392 aa16.99■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 PLEKHH1Q9ULM0 1364 aa16.99■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 SBNO2Q9Y2G9 1366 aa16.99■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 SOCS7O14512 581 aa16.98■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 MINK1Q8N4C8 1332 aaPredicted RBP16.97■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 ADGRL3Q9HAR2 1447 aa16.97■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 MSH6P52701 1360 aa16.97■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 CERKQ8TCT0 537 aa16.96■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
GTF2IRD2B-201ENST00000394939 EVC2Q86UK5 1308 aa16.96■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 TMF1P82094 1093 aa16.94■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 DCCP43146 1447 aa16.94■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 ATF3P18847 181 aa16.93■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 TESK2Q96S53 571 aa16.93■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 HIRIP3Q9BW71 556 aaPredicted RBP16.93■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 CDC42BPGQ6DT37 1551 aa16.93■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 XIRP1Q702N8 1843 aaKnown RBP16.92■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 CADPS2Q86UW7 1296 aa16.92■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 IQSEC2Q5JU85 1478 aa16.92■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
GTF2IRD2B-201ENST00000394939 SRPK2P78362 688 aaKnown RBP16.89■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 ATAD2Q6PL18 1390 aa16.86■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 TOM1O60784 492 aa16.84■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
GTF2IRD2B-201ENST00000394939 NUDT16Q96DE0 195 aaKnown RBP16.83■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 MST1RQ04912 1400 aa16.81■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 NUTM2FA1L443 756 aa16.81■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 ITSN1Q15811 1721 aa16.81■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 ATP7BP35670 1465 aa16.8■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 UBAP1LF5GYI3 381 aa16.8■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 KIF7Q2M1P5 1343 aa16.79■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 TMC1Q8TDI8 760 aa16.79■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 PRR36Q9H6K5 1346 aa16.78■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 PPIP5K1Q6PFW1 1433 aa16.78■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 PHF8Q9UPP1 1060 aa16.77■□□□□ 0.28
GTF2IRD2B-201ENST00000394939 USP32Q8NFA0 1604 aa16.77■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 KIF1AQ12756 1690 aa16.76■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 RGPD8O14715 1765 aaPredicted RBP16.76■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 WASHC2AQ641Q2 1341 aa16.75■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 NGDNQ8NEJ9 315 aaKnown RBP16.75■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 CABP1Q9NZU7 370 aa16.75■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 ORAI2Q96SN7 254 aa16.74■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 PIP4K2BP78356 416 aa16.72■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 ZNF692Q9BU19 519 aaPredicted RBP16.72■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 NPHP3Q7Z494 1330 aa16.71■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 POLR3AO14802 1390 aaPredicted RBP16.71■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 ANKRD36BQ8N2N9 1353 aa16.71■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 MYOM1P52179 1685 aa16.71■□□□□ 0.27
GTF2IRD2B-201ENST00000394939 ACEP12821 1306 aa16.7■□□□□ 0.26
GTF2IRD2B-201ENST00000394939 ROBO1Q9Y6N7 1651 aa16.7■□□□□ 0.26
GTF2IRD2B-201ENST00000394939 PSME1Q06323 249 aa16.7■□□□□ 0.26
GTF2IRD2B-201ENST00000394939 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
GTF2IRD2B-201ENST00000394939 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
GTF2IRD2B-201ENST00000394939 FOXO3O43524 673 aa16.68■□□□□ 0.26
GTF2IRD2B-201ENST00000394939 CPSF1Q10570 1443 aaKnown RBP16.67■□□□□ 0.26
GTF2IRD2B-201ENST00000394939 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms