RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ESF1Q9H501 851 aaKnown RBP24■■□□□ 1.43
PCDHA1-202ENST00000394633 CENPQQ7L2Z9 268 aaPredicted RBP23.99■■□□□ 1.43
PCDHA1-202ENST00000394633 SLC52A1Q9NWF4 448 aa23.99■■□□□ 1.43
PCDHA1-202ENST00000394633 TMEM131LA2VDJ0 1609 aa23.99■■□□□ 1.43
PCDHA1-202ENST00000394633 SLFN5Q08AF3 891 aa23.99■■□□□ 1.43
PCDHA1-202ENST00000394633 EIF3AQ14152 1382 aaKnown RBP23.98■■□□□ 1.43
PCDHA1-202ENST00000394633 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
PCDHA1-202ENST00000394633 NEXMIFQ5QGS0 1516 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 NRXN1Q9ULB1 1477 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 NEFMP07197 916 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 CCDC146Q8IYE0 955 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 TRMT2AQ8IZ69 625 aaKnown RBP23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 DDRGK1Q96HY6 314 aa23.96■■□□□ 1.43
PCDHA1-202ENST00000394633 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.95■■□□□ 1.42
PCDHA1-202ENST00000394633 USP35Q9P2H5 1018 aa23.94■■□□□ 1.42
PCDHA1-202ENST00000394633 FER1L4A9Z1Z3 1794 aa23.93■■□□□ 1.42
PCDHA1-202ENST00000394633 CFAP70Q5T0N1 1121 aa23.93■■□□□ 1.42
PCDHA1-202ENST00000394633 PPM1GO15355 546 aaPredicted RBP23.92■■□□□ 1.42
PCDHA1-202ENST00000394633 SPINK5Q9NQ38 1064 aaPredicted RBP23.92■■□□□ 1.42
PCDHA1-202ENST00000394633 CEBPAP49715 358 aaPredicted RBP23.91■■□□□ 1.42
PCDHA1-202ENST00000394633 NKTRP30414 1462 aaKnown RBP23.9■■□□□ 1.42
PCDHA1-202ENST00000394633 APAF1O14727 1248 aa23.9■■□□□ 1.42
PCDHA1-202ENST00000394633 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
PCDHA1-202ENST00000394633 RPGRIP1LQ68CZ1 1315 aa23.88■■□□□ 1.41
PCDHA1-202ENST00000394633 C3P01024 1663 aa23.88■■□□□ 1.41
PCDHA1-202ENST00000394633 C8orf34Q49A92 452 aa23.88■■□□□ 1.41
PCDHA1-202ENST00000394633 FAM161AQ3B820 660 aa23.87■■□□□ 1.41
PCDHA1-202ENST00000394633 MYO3AQ8NEV4 1616 aa23.87■■□□□ 1.41
PCDHA1-202ENST00000394633 A2ML1A8K2U0 1454 aa23.86■■□□□ 1.41
PCDHA1-202ENST00000394633 PLPPR3Q6T4P5 718 aa23.86■■□□□ 1.41
PCDHA1-202ENST00000394633 CARD14Q9BXL6 1004 aa23.86■■□□□ 1.41
PCDHA1-202ENST00000394633 TNRQ92752 1358 aa23.85■■□□□ 1.41
PCDHA1-202ENST00000394633 STAG3Q9UJ98 1225 aa23.84■■□□□ 1.41
PCDHA1-202ENST00000394633 BCAR3O75815 825 aa23.83■■□□□ 1.41
PCDHA1-202ENST00000394633 VIRMAQ69YN4 1812 aaKnown RBP23.83■■□□□ 1.41
PCDHA1-202ENST00000394633 E9PSI1 815 aa23.83■■□□□ 1.4
PCDHA1-202ENST00000394633 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.4
PCDHA1-202ENST00000394633 SLC24A1O60721 1099 aa23.82■■□□□ 1.4
PCDHA1-202ENST00000394633 VGFO15240 615 aaPredicted RBP23.81■■□□□ 1.4
PCDHA1-202ENST00000394633 SLC4A3P48751 1232 aa23.8■■□□□ 1.4
PCDHA1-202ENST00000394633 ADGRB1O14514 1584 aa23.8■■□□□ 1.4
PCDHA1-202ENST00000394633 SHPRHQ149N8 1683 aa23.8■■□□□ 1.4
PCDHA1-202ENST00000394633 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
PCDHA1-202ENST00000394633 RGS3P49796 1198 aa23.79■■□□□ 1.4
PCDHA1-202ENST00000394633 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
PCDHA1-202ENST00000394633 ZFYVE9O95405 1425 aa23.78■■□□□ 1.4
PCDHA1-202ENST00000394633 SETBP1Q9Y6X0 1596 aa23.78■■□□□ 1.4
PCDHA1-202ENST00000394633 NGEFQ8N5V2 710 aa23.78■■□□□ 1.4
PCDHA1-202ENST00000394633 RIMS1Q86UR5 1692 aaKnown RBP23.77■■□□□ 1.4
PCDHA1-202ENST00000394633 POLR3AO14802 1390 aaPredicted RBP23.77■■□□□ 1.4
PCDHA1-202ENST00000394633 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
PCDHA1-202ENST00000394633 UBR1Q8IWV7 1749 aa23.77■■□□□ 1.39
PCDHA1-202ENST00000394633 RIMS2Q9UQ26 1411 aa23.75■■□□□ 1.39
PCDHA1-202ENST00000394633 NFKBIBQ15653 356 aa23.74■■□□□ 1.39
PCDHA1-202ENST00000394633 ADAMTSL3P82987 1691 aa23.73■■□□□ 1.39
PCDHA1-202ENST00000394633 QRICH2Q9H0J4 1663 aa23.73■■□□□ 1.39
PCDHA1-202ENST00000394633 IGHDP01880 384 aa23.72■■□□□ 1.39
PCDHA1-202ENST00000394633 DAXXQ9UER7 740 aaPredicted RBP23.72■■□□□ 1.39
PCDHA1-202ENST00000394633 WWC1Q8IX03 1113 aa23.72■■□□□ 1.39
PCDHA1-202ENST00000394633 PDE3AQ14432 1141 aa23.71■■□□□ 1.39
PCDHA1-202ENST00000394633 CGNL1Q0VF96 1302 aa23.71■■□□□ 1.39
PCDHA1-202ENST00000394633 CENPJQ9HC77 1338 aaPredicted RBP23.71■■□□□ 1.39
PCDHA1-202ENST00000394633 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
PCDHA1-202ENST00000394633 NINLQ9Y2I6 1382 aa23.7■■□□□ 1.38
PCDHA1-202ENST00000394633 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
PCDHA1-202ENST00000394633 NLRP1Q9C000 1473 aa23.7■■□□□ 1.38
PCDHA1-202ENST00000394633 IL27Q8NEV9 243 aa23.68■■□□□ 1.38
PCDHA1-202ENST00000394633 IQSEC2Q5JU85 1478 aa23.67■■□□□ 1.38
PCDHA1-202ENST00000394633 ALKQ9UM73 1620 aa23.67■■□□□ 1.38
PCDHA1-202ENST00000394633 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 PANK1Q8TE04 598 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 USP32Q8NFA0 1604 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 PTPRMP28827 1452 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 TMEM2Q9UHN6 1383 aa23.66■■□□□ 1.38
PCDHA1-202ENST00000394633 CLUAP1Q96AJ1 413 aa23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 MORC1Q86VD1 984 aa23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 COG6Q9Y2V7 657 aa23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 SETD1AO15047 1707 aaKnown RBP23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 ARHGEF28Q8N1W1 1705 aaKnown RBP23.65■■□□□ 1.38
PCDHA1-202ENST00000394633 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
PCDHA1-202ENST00000394633 GSE1Q14687 1217 aa23.63■■□□□ 1.37
PCDHA1-202ENST00000394633 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
PCDHA1-202ENST00000394633 SLC12A5Q9H2X9 1139 aa23.63■■□□□ 1.37
PCDHA1-202ENST00000394633 USP19O94966 1318 aa23.62■■□□□ 1.37
PCDHA1-202ENST00000394633 TNNT2P45379 298 aaPredicted RBP23.62■■□□□ 1.37
PCDHA1-202ENST00000394633 RRP7AQ9Y3A4 280 aaKnown RBP23.61■■□□□ 1.37
PCDHA1-202ENST00000394633 NEUROD2Q15784 382 aa23.61■■□□□ 1.37
PCDHA1-202ENST00000394633 STK26Q9P289 416 aa23.61■■□□□ 1.37
PCDHA1-202ENST00000394633 LTKP29376 864 aa23.6■■□□□ 1.37
PCDHA1-202ENST00000394633 PHF23Q9BUL5 403 aaPredicted RBP23.6■■□□□ 1.37
PCDHA1-202ENST00000394633 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
PCDHA1-202ENST00000394633 RARSP54136 660 aaKnown RBP23.59■■□□□ 1.37
PCDHA1-202ENST00000394633 TCP11L2Q8N4U5 519 aa23.59■■□□□ 1.37
PCDHA1-202ENST00000394633 FRAT1Q92837 279 aaPredicted RBP23.59■■□□□ 1.37
PCDHA1-202ENST00000394633 YTHDC2Q9H6S0 1430 aaKnown RBP23.58■■□□□ 1.37
PCDHA1-202ENST00000394633 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
PCDHA1-202ENST00000394633 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
PCDHA1-202ENST00000394633 SEC24BO95487 1268 aa23.56■■□□□ 1.36
PCDHA1-202ENST00000394633 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
PCDHA1-202ENST00000394633 WDR63Q8IWG1 891 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms