RNA–Protein interactions for RNA: ENST00000394326.2

BHLHE41-202, Transcript of basic helix-loop-helix family member e41, humanhuman

TSL 2

Gene BHLHE41, Length 350 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41-202ENST00000394326 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
BHLHE41-202ENST00000394326 SNIP1Q8TAD8 396 aaKnown RBP9.08□□□□□ -0.96
BHLHE41-202ENST00000394326 NLRP7Q8WX94 980 aa9.08□□□□□ -0.96
BHLHE41-202ENST00000394326 PHOX2BQ99453 314 aa9.08□□□□□ -0.96
BHLHE41-202ENST00000394326 GNPATO15228 680 aa9.07□□□□□ -0.96
BHLHE41-202ENST00000394326 RBM26Q5T8P6 1007 aaKnown RBP9.07□□□□□ -0.96
BHLHE41-202ENST00000394326 RNF19BQ6ZMZ0 732 aa9.07□□□□□ -0.96
BHLHE41-202ENST00000394326 RTN4Q9NQC3 1192 aaKnown RBP9.07□□□□□ -0.96
BHLHE41-202ENST00000394326 TERTO14746 1132 aaKnown RBP9.06□□□□□ -0.96
BHLHE41-202ENST00000394326 ZBTB24O43167 697 aaPredicted RBP9.06□□□□□ -0.96
BHLHE41-202ENST00000394326 TRIM47Q96LD4 638 aa9.06□□□□□ -0.96
BHLHE41-202ENST00000394326 J3QL48 77 aa9.05□□□□□ -0.96
BHLHE41-202ENST00000394326 MMP16P51512 607 aa9.05□□□□□ -0.96
BHLHE41-202ENST00000394326 TRIM32Q13049 653 aa9.05□□□□□ -0.96
BHLHE41-202ENST00000394326 MRGPRX2Q96LB1 330 aa9.05□□□□□ -0.96
BHLHE41-202ENST00000394326 TESPA1A2RU30 521 aaPredicted RBP9.04□□□□□ -0.96
BHLHE41-202ENST00000394326 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
BHLHE41-202ENST00000394326 SULF1Q8IWU6 871 aa9.03□□□□□ -0.96
BHLHE41-202ENST00000394326 HPS1Q92902 700 aa9.02□□□□□ -0.97
BHLHE41-202ENST00000394326 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
BHLHE41-202ENST00000394326 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
BHLHE41-202ENST00000394326 DXOO77932 396 aaKnown RBP8.99□□□□□ -0.97
BHLHE41-202ENST00000394326 GRIPAP1Q4V328 841 aa8.98□□□□□ -0.97
BHLHE41-202ENST00000394326 SKOR1P84550 965 aa8.97□□□□□ -0.97
BHLHE41-202ENST00000394326 Q3C1V9 767 aa8.97□□□□□ -0.97
BHLHE41-202ENST00000394326 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
BHLHE41-202ENST00000394326 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
BHLHE41-202ENST00000394326 USB1Q9BQ65 265 aaKnown RBP8.96□□□□□ -0.98
BHLHE41-202ENST00000394326 REPIN1Q9BWE0 567 aaKnown RBP8.96□□□□□ -0.98
BHLHE41-202ENST00000394326 RC3H1Q5TC82 1133 aaKnown RBP8.95□□□□□ -0.98
BHLHE41-202ENST00000394326 CD46P15529 392 aa8.94□□□□□ -0.98
BHLHE41-202ENST00000394326 SMYD5Q6GMV2 418 aa8.94□□□□□ -0.98
BHLHE41-202ENST00000394326 WNT7BP56706 349 aa8.93□□□□□ -0.98
BHLHE41-202ENST00000394326 LOC100996750A0A140TA64 210 aa8.92□□□□□ -0.98
BHLHE41-202ENST00000394326 SLC16A10Q8TF71 515 aa8.92□□□□□ -0.98
BHLHE41-202ENST00000394326 KRTAP4-6Q9BYQ5 205 aa8.92□□□□□ -0.98
BHLHE41-202ENST00000394326 HLA-CQ95604 372 aa8.91□□□□□ -0.98
BHLHE41-202ENST00000394326 SIAH2O43255 324 aa8.9□□□□□ -0.98
BHLHE41-202ENST00000394326 KDM4AO75164 1064 aa8.9□□□□□ -0.98
BHLHE41-202ENST00000394326 NXF1Q9UBU9 619 aaKnown RBP8.9□□□□□ -0.98
BHLHE41-202ENST00000394326 GMPRP36959 345 aa8.89□□□□□ -0.99
BHLHE41-202ENST00000394326 TRIM46Q7Z4K8 759 aa8.88□□□□□ -0.99
BHLHE41-202ENST00000394326 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
BHLHE41-202ENST00000394326 ALDH1A1P00352 501 aa8.87□□□□□ -0.99
BHLHE41-202ENST00000394326 NPAS3Q8IXF0 933 aa8.87□□□□□ -0.99
BHLHE41-202ENST00000394326 USP46P62068 366 aa8.86□□□□□ -0.99
BHLHE41-202ENST00000394326 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
BHLHE41-202ENST00000394326 PTCRAQ6ISU1 281 aaPredicted RBP8.85□□□□□ -0.99
BHLHE41-202ENST00000394326 HOXA2O43364 376 aa8.84□□□□□ -0.99
BHLHE41-202ENST00000394326 BMP1P13497 986 aa8.84□□□□□ -0.99
BHLHE41-202ENST00000394326 IRF7Q92985 503 aa8.84□□□□□ -0.99
BHLHE41-202ENST00000394326 H3BM21 787 aa8.83□□□□□ -1
BHLHE41-202ENST00000394326 JUNDP17535 347 aa8.83□□□□□ -1
BHLHE41-202ENST00000394326 GPIHBP1Q8IV16 184 aa8.83□□□□□ -1
BHLHE41-202ENST00000394326 ERBB4Q15303 1308 aa8.82□□□□□ -1
BHLHE41-202ENST00000394326 CAPN5O15484 640 aaPredicted RBP8.82□□□□□ -1
BHLHE41-202ENST00000394326 SYMPKQ92797 1274 aaKnown RBP8.82□□□□□ -1
BHLHE41-202ENST00000394326 VEGFBP49765 207 aa8.81□□□□□ -1
BHLHE41-202ENST00000394326 GUCA2AQ02747 115 aa8.81□□□□□ -1
BHLHE41-202ENST00000394326 MAP2K5Q13163 448 aa8.8□□□□□ -1
BHLHE41-202ENST00000394326 EHBP1Q8NDI1 1231 aa8.8□□□□□ -1
BHLHE41-202ENST00000394326 IRF6O14896 467 aa8.79□□□□□ -1
BHLHE41-202ENST00000394326 SH3BP2P78314 561 aa8.78□□□□□ -1
BHLHE41-202ENST00000394326 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
BHLHE41-202ENST00000394326 RETREG3Q86VR2 466 aa8.78□□□□□ -1
BHLHE41-202ENST00000394326 NUDT12Q9BQG2 462 aa8.78□□□□□ -1
BHLHE41-202ENST00000394326 ZFP42Q96MM3 310 aa8.77□□□□□ -1.01
BHLHE41-202ENST00000394326 WASF2Q9Y6W5 498 aa8.77□□□□□ -1.01
BHLHE41-202ENST00000394326 PCDHGC3Q9UN70 934 aa8.75□□□□□ -1.01
BHLHE41-202ENST00000394326 FAM217BQ9NTX9 383 aaPredicted RBP8.74□□□□□ -1.01
BHLHE41-202ENST00000394326 SUZ12Q15022 739 aaKnown RBP8.73□□□□□ -1.01
BHLHE41-202ENST00000394326 MINK1Q8N4C8 1332 aaPredicted RBP8.73□□□□□ -1.01
BHLHE41-202ENST00000394326 CCNYL3P0C7X3 344 aa8.72□□□□□ -1.01
BHLHE41-202ENST00000394326 VSIG8P0DPA2 414 aa8.72□□□□□ -1.01
BHLHE41-202ENST00000394326 MPNDQ8N594 471 aa8.72□□□□□ -1.01
BHLHE41-202ENST00000394326 EVA1BQ9NVM1 165 aa8.72□□□□□ -1.01
BHLHE41-202ENST00000394326 KLF16Q9BXK1 252 aaPredicted RBP8.71□□□□□ -1.02
BHLHE41-202ENST00000394326 MS4A1P11836 297 aa8.7□□□□□ -1.02
BHLHE41-202ENST00000394326 MRPL14Q6P1L8 145 aaKnown RBP8.7□□□□□ -1.02
BHLHE41-202ENST00000394326 BAP1Q92560 729 aa8.7□□□□□ -1.02
BHLHE41-202ENST00000394326 UNC93B1Q9H1C4 597 aa8.7□□□□□ -1.02
BHLHE41-202ENST00000394326 TLL2Q9Y6L7 1015 aa8.7□□□□□ -1.02
BHLHE41-202ENST00000394326 FDX1P10109 184 aa8.69□□□□□ -1.02
BHLHE41-202ENST00000394326 PTPRNQ16849 979 aa8.69□□□□□ -1.02
BHLHE41-202ENST00000394326 GPCPD1Q9NPB8 672 aa8.69□□□□□ -1.02
BHLHE41-202ENST00000394326 TIMP2P16035 220 aa8.68□□□□□ -1.02
BHLHE41-202ENST00000394326 VARSP26640 1264 aaKnown RBP8.68□□□□□ -1.02
BHLHE41-202ENST00000394326 GSK3AP49840 483 aa8.68□□□□□ -1.02
BHLHE41-202ENST00000394326 NNTQ13423 1086 aa8.68□□□□□ -1.02
BHLHE41-202ENST00000394326 NUTM1Q86Y26 1132 aa8.68□□□□□ -1.02
BHLHE41-202ENST00000394326 CCDC102AQ96A19 550 aa8.68□□□□□ -1.02
BHLHE41-202ENST00000394326 CLCN1P35523 988 aa8.67□□□□□ -1.02
BHLHE41-202ENST00000394326 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
BHLHE41-202ENST00000394326 ZNF511Q8NB15 262 aa8.67□□□□□ -1.02
BHLHE41-202ENST00000394326 PLEKHG3A1L390 1219 aa8.66□□□□□ -1.02
BHLHE41-202ENST00000394326 SOBPA7XYQ1 873 aa8.66□□□□□ -1.02
BHLHE41-202ENST00000394326 C6orf229H3BNL8 230 aa8.66□□□□□ -1.02
BHLHE41-202ENST00000394326 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
BHLHE41-202ENST00000394326 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
BHLHE41-202ENST00000394326 KCNMA1Q12791 1236 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms