RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 RNF214Q8ND24 703 aa6.84□□□□□ -1.32
GAPVD1-206ENST00000394104 RBM10P98175 930 aaKnown RBP6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 AIMP1Q12904 312 aaKnown RBP6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 ZRSR2Q15696 482 aaKnown RBP6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 LEKR1Q6ZMV7 388 aa6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 RALYLQ86SE5 291 aaKnown RBP6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 PDS5BQ9NTI5 1447 aa6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 DDX58O95786 925 aaKnown RBP6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 CDK5RAP3Q96JB5 506 aa6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 ANKRD30AQ9BXX3 1397 aa6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 SPC24Q8NBT2 197 aa6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 BAZ1AQ9NRL2 1556 aaPredicted RBP6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 FKBP5Q13451 457 aaPredicted RBP6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 NASPP49321 788 aaPredicted RBP6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 STK11IPQ8N1F8 1099 aa6.83□□□□□ -1.32
GAPVD1-206ENST00000394104 CUX2O14529 1486 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 SMARCE1Q969G3 411 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 XBP1P17861 261 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 ATP2B1P20020 1258 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 CEBPZQ03701 1054 aaKnown RBP6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 AEBP2Q6ZN18 517 aaPredicted RBP6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 RIC3Q7Z5B4 369 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 PHF23Q9BUL5 403 aaPredicted RBP6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 DDX19BQ9UMR2 479 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 NUCB2P80303 420 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 TRIM5Q9C035 493 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 CARMIL1Q5VZK9 1371 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 KRT18P05783 430 aaKnown RBP6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 RIPK4P57078 832 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 FMNL2Q96PY5 1086 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 SDF4Q9BRK5 362 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 ROCK1Q13464 1354 aa6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 CT47B1P0C2W7 299 aaPredicted RBP6.82□□□□□ -1.32
GAPVD1-206ENST00000394104 FAM177BA6PVY3 158 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 ERC2O15083 957 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 FAM193AP78312 1265 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 KANK4Q5T7N3 995 aaPredicted RBP6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 NINLQ9Y2I6 1382 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 MINK1Q8N4C8 1332 aaPredicted RBP6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 LNPKQ9C0E8 428 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 CENPHQ9H3R5 247 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 CECR2Q9BXF3 1484 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 ERLIN2O94905 339 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 FILIP1LQ4L180 1135 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 L3MBTL2Q969R5 705 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 CCAR1Q8IX12 1150 aaKnown RBP6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 DZIP1LQ8IYY4 767 aaKnown RBP6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 TSPYL4Q9UJ04 414 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 GOLGA6L10A6NI86 522 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 DNAJC2Q99543 621 aaKnown RBP6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 TSPY26PQ9H489 355 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 SMARCA2P51531 1590 aa6.81□□□□□ -1.32
GAPVD1-206ENST00000394104 PSME1Q06323 249 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 TAX1BP1Q86VP1 789 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 C22orf23Q9BZE7 217 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 APAF1O14727 1248 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 CAVIN1Q6NZI2 390 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 CCDC97Q96F63 343 aaPredicted RBP6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 CCDC66A2RUB6 948 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 ATP2B2Q01814 1243 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 KIAA0754O94854 1291 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 ANKRD18AQ8IVF6 992 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 ZHX3Q9H4I2 956 aa6.8□□□□□ -1.32
GAPVD1-206ENST00000394104 CCDC181Q5TID7 509 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 EFCAB2Q5VUJ9 269 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 EVC2Q86UK5 1308 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 DIAPH1O60610 1272 aaKnown RBP6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 HMOX1P09601 288 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 FAM177A1Q8N128 213 aaPredicted RBP6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 CNTROBQ8N137 903 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 PSMA5P28066 241 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 ZNF428Q96B54 188 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 TANGO6Q9C0B7 1094 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 SEPT11Q9NVA2 429 aaKnown RBP6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 LETM1O95202 739 aaPredicted RBP6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 IBSPP21815 317 aaPredicted RBP6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 PDCL3Q9H2J4 239 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 CARMIL2Q6F5E8 1435 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 ST20-MTHFSA0A0A6YYL1 179 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 FSD1Q9BTV5 496 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 DEF6Q9H4E7 631 aa6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 API5Q9BZZ5 524 aaKnown RBP6.79□□□□□ -1.32
GAPVD1-206ENST00000394104 SERPINC1P01008 464 aa6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 MATR3P43243 847 aaKnown RBP eCLIP6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 CCP110O43303 1012 aa6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 TXLNAP40222 546 aa6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 KINO60870 393 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 GBP2P32456 591 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 FMN1Q68DA7 1419 aa6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 PRPF40AO75400 957 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 STK3Q13188 491 aa6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 MAPK8IP2Q13387 824 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 NUTM2GQ5VZR2 741 aa6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 MPNDQ8N594 471 aa6.78□□□□□ -1.32
GAPVD1-206ENST00000394104 SART3Q15020 963 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 NFKBIBQ15653 356 aa6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 TTC39AQ5SRH9 613 aa6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 CLASRPQ8N2M8 674 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 ZNHIT6Q9NWK9 470 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms