RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 NGEFQ8N5V2 710 aa24.01■■□□□ 1.43
SMARCC2-203ENST00000394023 ASXL1Q8IXJ9 1541 aa24.01■■□□□ 1.43
SMARCC2-203ENST00000394023 ARXQ96QS3 562 aa24.01■■□□□ 1.43
SMARCC2-203ENST00000394023 RWDD1Q9H446 243 aaPredicted RBP24.01■■□□□ 1.43
SMARCC2-203ENST00000394023 TRHP20396 242 aaPredicted RBP24.01■■□□□ 1.43
SMARCC2-203ENST00000394023 FBLN1P23142 703 aa23.99■■□□□ 1.43
SMARCC2-203ENST00000394023 SPRYD3Q8NCJ5 442 aa23.98■■□□□ 1.43
SMARCC2-203ENST00000394023 ZKSCAN2Q63HK3 967 aa23.98■■□□□ 1.43
SMARCC2-203ENST00000394023 PMFBP1Q8TBY8 1022 aa23.98■■□□□ 1.43
SMARCC2-203ENST00000394023 BECN1Q14457 450 aa23.96■■□□□ 1.43
SMARCC2-203ENST00000394023 EXOSC9Q06265 439 aaKnown RBP23.96■■□□□ 1.43
SMARCC2-203ENST00000394023 DMRT2Q9Y5R5 561 aa23.96■■□□□ 1.43
SMARCC2-203ENST00000394023 HSP90AA1P07900 732 aaKnown RBP23.96■■□□□ 1.43
SMARCC2-203ENST00000394023 IPO8O15397 1037 aaKnown RBP23.94■■□□□ 1.42
SMARCC2-203ENST00000394023 COG3Q96JB2 828 aa23.94■■□□□ 1.42
SMARCC2-203ENST00000394023 DZIP1LQ8IYY4 767 aaKnown RBP23.92■■□□□ 1.42
SMARCC2-203ENST00000394023 SLKQ9H2G2 1235 aaPredicted RBP23.92■■□□□ 1.42
SMARCC2-203ENST00000394023 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
SMARCC2-203ENST00000394023 PRKAR2BP31323 418 aa23.91■■□□□ 1.42
SMARCC2-203ENST00000394023 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
SMARCC2-203ENST00000394023 TRPM1Q7Z4N2 1603 aa23.9■■□□□ 1.42
SMARCC2-203ENST00000394023 ZFYVE16Q7Z3T8 1539 aa23.9■■□□□ 1.42
SMARCC2-203ENST00000394023 NPATQ14207 1427 aa23.9■■□□□ 1.42
SMARCC2-203ENST00000394023 PRDM15P57071 1507 aaPredicted RBP23.9■■□□□ 1.42
SMARCC2-203ENST00000394023 UNC13BO14795 1591 aa23.9■■□□□ 1.42
SMARCC2-203ENST00000394023 APBB1O00213 710 aa23.89■■□□□ 1.41
SMARCC2-203ENST00000394023 LMOD2Q6P5Q4 547 aa23.89■■□□□ 1.41
SMARCC2-203ENST00000394023 PDE3AQ14432 1141 aa23.89■■□□□ 1.41
SMARCC2-203ENST00000394023 PTPRTO14522 1441 aa23.88■■□□□ 1.41
SMARCC2-203ENST00000394023 NKTRP30414 1462 aaKnown RBP23.87■■□□□ 1.41
SMARCC2-203ENST00000394023 WDR63Q8IWG1 891 aa23.87■■□□□ 1.41
SMARCC2-203ENST00000394023 NGDNQ8NEJ9 315 aaKnown RBP23.87■■□□□ 1.41
SMARCC2-203ENST00000394023 RARSP54136 660 aaKnown RBP23.86■■□□□ 1.41
SMARCC2-203ENST00000394023 TRPM2O94759 1503 aa23.86■■□□□ 1.41
SMARCC2-203ENST00000394023 MFAP1P55081 439 aaKnown RBP23.85■■□□□ 1.41
SMARCC2-203ENST00000394023 TMPOP42166 694 aaKnown RBP23.85■■□□□ 1.41
SMARCC2-203ENST00000394023 EID1Q9Y6B2 187 aa23.85■■□□□ 1.41
SMARCC2-203ENST00000394023 THUMPD2Q9BTF0 503 aaKnown RBP23.85■■□□□ 1.41
SMARCC2-203ENST00000394023 PIK3C2GO75747 1445 aa23.85■■□□□ 1.41
SMARCC2-203ENST00000394023 RRS1Q15050 365 aaKnown RBP23.84■■□□□ 1.41
SMARCC2-203ENST00000394023 TNNQ9UQP3 1299 aa23.84■■□□□ 1.41
SMARCC2-203ENST00000394023 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
SMARCC2-203ENST00000394023 SLC26A8Q96RN1 970 aa23.83■■□□□ 1.41
SMARCC2-203ENST00000394023 POGZQ7Z3K3 1410 aa23.83■■□□□ 1.4
SMARCC2-203ENST00000394023 ATAD2Q6PL18 1390 aa23.83■■□□□ 1.4
SMARCC2-203ENST00000394023 FYB1O15117 783 aa23.82■■□□□ 1.4
SMARCC2-203ENST00000394023 LTV1Q96GA3 475 aaPredicted RBP23.82■■□□□ 1.4
SMARCC2-203ENST00000394023 IGHDP01880 384 aa23.81■■□□□ 1.4
SMARCC2-203ENST00000394023 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
SMARCC2-203ENST00000394023 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMARCC2-203ENST00000394023 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
SMARCC2-203ENST00000394023 NME9Q86XW9 330 aa23.79■■□□□ 1.4
SMARCC2-203ENST00000394023 NOB1Q9ULX3 412 aaKnown RBP23.79■■□□□ 1.4
SMARCC2-203ENST00000394023 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
SMARCC2-203ENST00000394023 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
SMARCC2-203ENST00000394023 RTF1Q92541 710 aaKnown RBP23.79■■□□□ 1.4
SMARCC2-203ENST00000394023 PDZRN3Q9UPQ7 1066 aa23.79■■□□□ 1.4
SMARCC2-203ENST00000394023 ERVK-7P63135 1459 aa23.79■■□□□ 1.4
SMARCC2-203ENST00000394023 EMILIN1Q9Y6C2 1016 aa23.78■■□□□ 1.4
SMARCC2-203ENST00000394023 DDX19BQ9UMR2 479 aa23.77■■□□□ 1.4
SMARCC2-203ENST00000394023 POLR3AO14802 1390 aaPredicted RBP23.77■■□□□ 1.4
SMARCC2-203ENST00000394023 AMPHP49418 695 aa23.76■■□□□ 1.39
SMARCC2-203ENST00000394023 YEATS2Q9ULM3 1422 aa23.76■■□□□ 1.39
SMARCC2-203ENST00000394023 ANKRD36BQ8N2N9 1353 aa23.76■■□□□ 1.39
SMARCC2-203ENST00000394023 NUTM2GQ5VZR2 741 aa23.76■■□□□ 1.39
SMARCC2-203ENST00000394023 NPC1L1Q9UHC9 1359 aa23.76■■□□□ 1.39
SMARCC2-203ENST00000394023 ZMYM4Q5VZL5 1548 aa23.76■■□□□ 1.39
SMARCC2-203ENST00000394023 NUDT16Q96DE0 195 aaKnown RBP23.76■■□□□ 1.39
SMARCC2-203ENST00000394023 RTN4Q9NQC3 1192 aaKnown RBP23.76■■□□□ 1.39
SMARCC2-203ENST00000394023 CEBPAP49715 358 aaPredicted RBP23.75■■□□□ 1.39
SMARCC2-203ENST00000394023 E9PCH4 1651 aa23.75■■□□□ 1.39
SMARCC2-203ENST00000394023 SSH1Q8WYL5 1049 aa23.75■■□□□ 1.39
SMARCC2-203ENST00000394023 ANKRD45Q5TZF3 282 aa23.74■■□□□ 1.39
SMARCC2-203ENST00000394023 LNPKQ9C0E8 428 aa23.74■■□□□ 1.39
SMARCC2-203ENST00000394023 A0A1W2PP64 1363 aa23.73■■□□□ 1.39
SMARCC2-203ENST00000394023 SLC4A10Q6U841 1118 aa23.73■■□□□ 1.39
SMARCC2-203ENST00000394023 NCKAP5LQ9HCH0 1330 aa23.73■■□□□ 1.39
SMARCC2-203ENST00000394023 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
SMARCC2-203ENST00000394023 CHMP4BQ9H444 224 aaKnown RBP23.72■■□□□ 1.39
SMARCC2-203ENST00000394023 C1orf115Q9H7X2 142 aa23.72■■□□□ 1.39
SMARCC2-203ENST00000394023 RLBP1P12271 317 aa23.72■■□□□ 1.39
SMARCC2-203ENST00000394023 LMOD3Q0VAK6 560 aa23.72■■□□□ 1.39
SMARCC2-203ENST00000394023 MVPQ14764 893 aaKnown RBP23.72■■□□□ 1.39
SMARCC2-203ENST00000394023 CCDC61Q9Y6R9 512 aa23.71■■□□□ 1.39
SMARCC2-203ENST00000394023 POLR1AO95602 1720 aaPredicted RBP23.71■■□□□ 1.39
SMARCC2-203ENST00000394023 DCTN1Q14203 1278 aa23.7■■□□□ 1.38
SMARCC2-203ENST00000394023 ATF7IPQ6VMQ6 1270 aa23.7■■□□□ 1.38
SMARCC2-203ENST00000394023 TET3O43151 1660 aa23.69■■□□□ 1.38
SMARCC2-203ENST00000394023 SULT6B1Q6IMI4 303 aa23.68■■□□□ 1.38
SMARCC2-203ENST00000394023 KIF16BQ96L93 1317 aa23.68■■□□□ 1.38
SMARCC2-203ENST00000394023 FCHSD2O94868 740 aa23.68■■□□□ 1.38
SMARCC2-203ENST00000394023 GNAI1P63096 354 aa23.68■■□□□ 1.38
SMARCC2-203ENST00000394023 PCDHB15Q9Y5E8 787 aa23.68■■□□□ 1.38
SMARCC2-203ENST00000394023 WASLO00401 505 aaPredicted RBP23.67■■□□□ 1.38
SMARCC2-203ENST00000394023 ZNF521Q96K83 1311 aa23.67■■□□□ 1.38
SMARCC2-203ENST00000394023 TMEM57Q8N5G2 664 aa23.67■■□□□ 1.38
SMARCC2-203ENST00000394023 MADDQ8WXG6 1647 aa23.66■■□□□ 1.38
SMARCC2-203ENST00000394023 NECTIN2Q92692 538 aa23.66■■□□□ 1.38
SMARCC2-203ENST00000394023 SPHKAPQ2M3C7 1700 aa23.65■■□□□ 1.38
SMARCC2-203ENST00000394023 TRIM27P14373 513 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms