RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 GPATCH11Q8N954 259 aa14.19□□□□□ -0.14
LAMB1-203ENST00000393560 MCM4P33991 863 aa14.19□□□□□ -0.14
LAMB1-203ENST00000393560 GTF2A1P52655 376 aaPredicted RBP14.19□□□□□ -0.14
LAMB1-203ENST00000393560 ANAPC15P60006 121 aa14.19□□□□□ -0.14
LAMB1-203ENST00000393560 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
LAMB1-203ENST00000393560 CCDC173Q0VFZ6 552 aa14.18□□□□□ -0.14
LAMB1-203ENST00000393560 TMX1Q9H3N1 280 aa14.18□□□□□ -0.14
LAMB1-203ENST00000393560 TSPYL1Q9H0U9 437 aa14.18□□□□□ -0.14
LAMB1-203ENST00000393560 MIA2Q96PC5 1412 aa14.17□□□□□ -0.14
LAMB1-203ENST00000393560 ATP10BO94823 1461 aa14.17□□□□□ -0.14
LAMB1-203ENST00000393560 MAP2K1Q02750 393 aaPredicted RBP14.17□□□□□ -0.14
LAMB1-203ENST00000393560 TCOF1Q13428 1488 aaKnown RBP14.17□□□□□ -0.14
LAMB1-203ENST00000393560 TNNT1P13805 278 aa14.17□□□□□ -0.14
LAMB1-203ENST00000393560 GAS2L3Q86XJ1 694 aa14.17□□□□□ -0.14
LAMB1-203ENST00000393560 SMC4Q9NTJ3 1288 aa14.17□□□□□ -0.14
LAMB1-203ENST00000393560 CCDC172P0C7W6 258 aa14.16□□□□□ -0.14
LAMB1-203ENST00000393560 ERCC6L2Q5T890 1561 aa14.16□□□□□ -0.14
LAMB1-203ENST00000393560 KIF14Q15058 1648 aa14.16□□□□□ -0.14
LAMB1-203ENST00000393560 BRPF1P55201 1214 aaPredicted RBP14.16□□□□□ -0.14
LAMB1-203ENST00000393560 MRS2Q9HD23 443 aa14.16□□□□□ -0.14
LAMB1-203ENST00000393560 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
LAMB1-203ENST00000393560 PLCB2Q00722 1185 aa14.15□□□□□ -0.14
LAMB1-203ENST00000393560 FEZ2Q9UHY8 353 aaPredicted RBP14.15□□□□□ -0.14
LAMB1-203ENST00000393560 PUS7Q96PZ0 661 aaKnown RBP14.15□□□□□ -0.14
LAMB1-203ENST00000393560 NCAPGQ9BPX3 1015 aa14.14□□□□□ -0.15
LAMB1-203ENST00000393560 ABCA8O94911 1581 aa14.14□□□□□ -0.15
LAMB1-203ENST00000393560 CSPP1Q1MSJ5 1256 aa14.14□□□□□ -0.15
LAMB1-203ENST00000393560 FAM177BA6PVY3 158 aa14.14□□□□□ -0.15
LAMB1-203ENST00000393560 ZBTB7CA1YPR0 619 aa14.13□□□□□ -0.15
LAMB1-203ENST00000393560 FAM161AQ3B820 660 aa14.13□□□□□ -0.15
LAMB1-203ENST00000393560 PPP1R9BQ96SB3 815 aa14.13□□□□□ -0.15
LAMB1-203ENST00000393560 U2AF2P26368 475 aaKnown RBP eCLIP14.13□□□□□ -0.154e-10■■□□□ 12.3
LAMB1-203ENST00000393560 SGSM3Q96HU1 749 aa14.13□□□□□ -0.15
LAMB1-203ENST00000393560 RSPH14Q9UHP6 348 aa14.13□□□□□ -0.15
LAMB1-203ENST00000393560 ABCC5O15440 1437 aa14.13□□□□□ -0.15
LAMB1-203ENST00000393560 UACAQ9BZF9 1416 aa14.13□□□□□ -0.15
LAMB1-203ENST00000393560 GPATCH8Q9UKJ3 1502 aaKnown RBP14.12□□□□□ -0.15
LAMB1-203ENST00000393560 CALCOCO1Q9P1Z2 691 aa14.12□□□□□ -0.15
LAMB1-203ENST00000393560 DAPK1P53355 1430 aa14.12□□□□□ -0.15
LAMB1-203ENST00000393560 KDM6BO15054 1643 aa14.12□□□□□ -0.15
LAMB1-203ENST00000393560 SETQ01105 290 aaPredicted RBP14.12□□□□□ -0.15
LAMB1-203ENST00000393560 DNAJC21Q5F1R6 531 aaKnown RBP14.12□□□□□ -0.15
LAMB1-203ENST00000393560 C8orf34Q49A92 452 aa14.11□□□□□ -0.15
LAMB1-203ENST00000393560 ANTXR1Q9H6X2 564 aa14.11□□□□□ -0.15
LAMB1-203ENST00000393560 CWC22Q9HCG8 908 aaKnown RBP14.11□□□□□ -0.15
LAMB1-203ENST00000393560 ERICH4A6NGS2 130 aa14.1□□□□□ -0.15
LAMB1-203ENST00000393560 NBPF11Q86T75 865 aa14.1□□□□□ -0.15
LAMB1-203ENST00000393560 MYRIPQ8NFW9 859 aa14.1□□□□□ -0.15
LAMB1-203ENST00000393560 PDCL2Q8N4E4 241 aa14.1□□□□□ -0.15
LAMB1-203ENST00000393560 TOMM22Q9NS69 142 aa14.1□□□□□ -0.15
LAMB1-203ENST00000393560 SLFN14P0C7P3 912 aa14.1□□□□□ -0.15
LAMB1-203ENST00000393560 NOL7Q9UMY1 257 aaKnown RBP14.09□□□□□ -0.15
LAMB1-203ENST00000393560 CAMSAP2Q08AD1 1489 aa14.09□□□□□ -0.15
LAMB1-203ENST00000393560 NOP2P46087 812 aaKnown RBP14.09□□□□□ -0.15
LAMB1-203ENST00000393560 NASPP49321 788 aaPredicted RBP14.09□□□□□ -0.15
LAMB1-203ENST00000393560 L3MBTL2Q969R5 705 aa14.09□□□□□ -0.15
LAMB1-203ENST00000393560 UPF2Q9HAU5 1272 aaKnown RBP14.09□□□□□ -0.15
LAMB1-203ENST00000393560 HNRNPMP52272 730 aaKnown RBP eCLIP14.08□□□□□ -0.162e-7■■□□□ 14.4
LAMB1-203ENST00000393560 CALR3Q96L12 384 aaKnown RBP14.08□□□□□ -0.16
LAMB1-203ENST00000393560 TTC36A6NLP5 189 aa14.08□□□□□ -0.16
LAMB1-203ENST00000393560 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.08□□□□□ -0.16
LAMB1-203ENST00000393560 GABPB1Q06547 395 aaPredicted RBP14.07□□□□□ -0.16
LAMB1-203ENST00000393560 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
LAMB1-203ENST00000393560 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
LAMB1-203ENST00000393560 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
LAMB1-203ENST00000393560 ARID4AP29374 1257 aaPredicted RBP14.07□□□□□ -0.16
LAMB1-203ENST00000393560 RRP1P56182 461 aaKnown RBP14.06□□□□□ -0.16
LAMB1-203ENST00000393560 ZNF513Q8N8E2 541 aaPredicted RBP14.06□□□□□ -0.16
LAMB1-203ENST00000393560 RAI14Q9P0K7 980 aa14.06□□□□□ -0.16
LAMB1-203ENST00000393560 KDM5BQ9UGL1 1544 aa14.05□□□□□ -0.16
LAMB1-203ENST00000393560 TDO2P48775 406 aa14.05□□□□□ -0.16
LAMB1-203ENST00000393560 NBPF8Q3BBV2 869 aa14.04□□□□□ -0.16
LAMB1-203ENST00000393560 NBPF9Q3BBW0 867 aa14.04□□□□□ -0.16
LAMB1-203ENST00000393560 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
LAMB1-203ENST00000393560 MFAP1P55081 439 aaKnown RBP14.04□□□□□ -0.16
LAMB1-203ENST00000393560 EIF4G2P78344 907 aaKnown RBP eCLIP14.04□□□□□ -0.16
LAMB1-203ENST00000393560 ICE2Q659A1 982 aa14.04□□□□□ -0.16
LAMB1-203ENST00000393560 SHROOM2Q13796 1616 aa14.03□□□□□ -0.16
LAMB1-203ENST00000393560 DENND4BO75064 1496 aaPredicted RBP14.03□□□□□ -0.16
LAMB1-203ENST00000393560 BORCS6Q96GS4 357 aa14.03□□□□□ -0.16
LAMB1-203ENST00000393560 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
LAMB1-203ENST00000393560 ABCC10Q5T3U5 1492 aa14.03□□□□□ -0.16
LAMB1-203ENST00000393560 FAM212AQ96EL1 285 aa14.02□□□□□ -0.16
LAMB1-203ENST00000393560 GCC2Q8IWJ2 1684 aa14.02□□□□□ -0.17
LAMB1-203ENST00000393560 OGFRQ9NZT2 677 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 ZKSCAN5Q9Y2L8 839 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 ROCK1Q13464 1354 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 KIF16BQ96L93 1317 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 ITSN2Q9NZM3 1697 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 HS1BP3Q53T59 392 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 PRKRIP1Q9H875 184 aaPredicted RBP14.01□□□□□ -0.17
LAMB1-203ENST00000393560 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
LAMB1-203ENST00000393560 DONSONQ9NYP3 566 aa14.01□□□□□ -0.17
LAMB1-203ENST00000393560 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
LAMB1-203ENST00000393560 TSPY4P0CV99 314 aa14□□□□□ -0.17
LAMB1-203ENST00000393560 TSPY10P0CW01 314 aa14□□□□□ -0.17
LAMB1-203ENST00000393560 CDC42BPAQ5VT25 1732 aa14□□□□□ -0.17
LAMB1-203ENST00000393560 NCOA1Q15788 1441 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms