RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 CCDC73Q6ZRK6 1079 aa16.21■□□□□ 0.19
GSE1-202ENST00000393243 INTS3Q68E01 1043 aaKnown RBP16.21■□□□□ 0.19
GSE1-202ENST00000393243 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
GSE1-202ENST00000393243 EVC2Q86UK5 1308 aa16.21■□□□□ 0.19
GSE1-202ENST00000393243 SPC24Q8NBT2 197 aa16.21■□□□□ 0.18
GSE1-202ENST00000393243 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
GSE1-202ENST00000393243 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.2■□□□□ 0.18
GSE1-202ENST00000393243 NFKBIBQ15653 356 aa16.2■□□□□ 0.18
GSE1-202ENST00000393243 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
GSE1-202ENST00000393243 CCDC144AA2RUR9 1427 aa16.2■□□□□ 0.18
GSE1-202ENST00000393243 CAVIN1Q6NZI2 390 aaKnown RBP16.19■□□□□ 0.18
GSE1-202ENST00000393243 SMC2O95347 1197 aa16.19■□□□□ 0.18
GSE1-202ENST00000393243 SAFBQ15424 915 aaKnown RBP eCLIP16.19■□□□□ 0.18
GSE1-202ENST00000393243 C1orf115Q9H7X2 142 aa16.19■□□□□ 0.18
GSE1-202ENST00000393243 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
GSE1-202ENST00000393243 OFD1O75665 1012 aa16.18■□□□□ 0.18
GSE1-202ENST00000393243 NASPP49321 788 aaPredicted RBP16.18■□□□□ 0.18
GSE1-202ENST00000393243 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
GSE1-202ENST00000393243 RALYLQ86SE5 291 aaKnown RBP16.18■□□□□ 0.18
GSE1-202ENST00000393243 USP47Q96K76 1375 aa16.18■□□□□ 0.18
GSE1-202ENST00000393243 OLFM4Q6UX06 510 aa16.18■□□□□ 0.18
GSE1-202ENST00000393243 ZBED9Q6R2W3 1325 aa16.18■□□□□ 0.18
GSE1-202ENST00000393243 SDF4Q9BRK5 362 aa16.18■□□□□ 0.18
GSE1-202ENST00000393243 DNAJC2Q99543 621 aaKnown RBP16.18■□□□□ 0.18
GSE1-202ENST00000393243 DDX58O95786 925 aaKnown RBP16.17■□□□□ 0.18
GSE1-202ENST00000393243 CHMP4CQ96CF2 233 aa16.17■□□□□ 0.18
GSE1-202ENST00000393243 HSP90B2PQ58FF3 399 aa16.16■□□□□ 0.18
GSE1-202ENST00000393243 ARGLU1Q9NWB6 273 aaPredicted RBP16.16■□□□□ 0.18
GSE1-202ENST00000393243 H0YHG0 523 aa16.15■□□□□ 0.18
GSE1-202ENST00000393243 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
GSE1-202ENST00000393243 TRIM5Q9C035 493 aa16.15■□□□□ 0.18
GSE1-202ENST00000393243 TMEM132AQ24JP5 1023 aa16.15■□□□□ 0.18
GSE1-202ENST00000393243 BRPF3Q9ULD4 1205 aa16.14■□□□□ 0.18
GSE1-202ENST00000393243 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
GSE1-202ENST00000393243 NUCB2P80303 420 aa16.14■□□□□ 0.17
GSE1-202ENST00000393243 STK3Q13188 491 aa16.14■□□□□ 0.17
GSE1-202ENST00000393243 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
GSE1-202ENST00000393243 PRPF40AO75400 957 aaKnown RBP16.13■□□□□ 0.17
GSE1-202ENST00000393243 FSD1Q9BTV5 496 aa16.13■□□□□ 0.17
GSE1-202ENST00000393243 FAM177A1Q8N128 213 aaPredicted RBP16.12■□□□□ 0.17
GSE1-202ENST00000393243 ERC2O15083 957 aa16.12■□□□□ 0.17
GSE1-202ENST00000393243 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
GSE1-202ENST00000393243 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
GSE1-202ENST00000393243 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
GSE1-202ENST00000393243 UBTFL1P0CB47 393 aaPredicted RBP16.11■□□□□ 0.17
GSE1-202ENST00000393243 FIBPO43427 364 aa16.1■□□□□ 0.17
GSE1-202ENST00000393243 TRAK2O60296 914 aa16.1■□□□□ 0.17
GSE1-202ENST00000393243 PAF1Q8N7H5 531 aa16.1■□□□□ 0.17
GSE1-202ENST00000393243 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
GSE1-202ENST00000393243 CCDC39Q9UFE4 941 aa16.1■□□□□ 0.17
GSE1-202ENST00000393243 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
GSE1-202ENST00000393243 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
GSE1-202ENST00000393243 CDR1P51861 262 aa16.1■□□□□ 0.17
GSE1-202ENST00000393243 ACBD3Q9H3P7 528 aa16.1■□□□□ 0.17
GSE1-202ENST00000393243 BRMS1Q9HCU9 246 aa16.1■□□□□ 0.17
GSE1-202ENST00000393243 NAT10Q9H0A0 1025 aaKnown RBP16.09■□□□□ 0.17
GSE1-202ENST00000393243 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
GSE1-202ENST00000393243 AXDND1Q5T1B0 1012 aaPredicted RBP16.09■□□□□ 0.17
GSE1-202ENST00000393243 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
GSE1-202ENST00000393243 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
GSE1-202ENST00000393243 NLRP2Q9NX02 1062 aa16.09■□□□□ 0.17
GSE1-202ENST00000393243 IL27Q8NEV9 243 aa16.08■□□□□ 0.17
GSE1-202ENST00000393243 NEK4P51957 841 aa16.08■□□□□ 0.16
GSE1-202ENST00000393243 TSPYL1Q9H0U9 437 aa16.08■□□□□ 0.16
GSE1-202ENST00000393243 ROCK1Q13464 1354 aa16.08■□□□□ 0.16
GSE1-202ENST00000393243 ANKRD62A6NC57 917 aa16.07■□□□□ 0.16
GSE1-202ENST00000393243 CDC45O75419 566 aa16.07■□□□□ 0.16
GSE1-202ENST00000393243 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
GSE1-202ENST00000393243 CNTROBQ8N137 903 aa16.07■□□□□ 0.16
GSE1-202ENST00000393243 NEFHP12036 1026 aa16.07■□□□□ 0.16
GSE1-202ENST00000393243 HSP90AB3PQ58FF7 597 aa16.07■□□□□ 0.16
GSE1-202ENST00000393243 PPP1R1BQ9UD71 204 aaPredicted RBP16.07■□□□□ 0.16
GSE1-202ENST00000393243 SURF6O75683 361 aaKnown RBP16.07■□□□□ 0.16
GSE1-202ENST00000393243 ZHX3Q9H4I2 956 aa16.07■□□□□ 0.16
GSE1-202ENST00000393243 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.07■□□□□ 0.16
GSE1-202ENST00000393243 TMEM132EQ6IEE7 984 aa16.07■□□□□ 0.16
GSE1-202ENST00000393243 DHX57Q6P158 1386 aaKnown RBP16.07■□□□□ 0.16
GSE1-202ENST00000393243 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
GSE1-202ENST00000393243 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
GSE1-202ENST00000393243 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
GSE1-202ENST00000393243 CDK5RAP3Q96JB5 506 aa16.06■□□□□ 0.16
GSE1-202ENST00000393243 SIL1Q9H173 461 aa16.06■□□□□ 0.16
GSE1-202ENST00000393243 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
GSE1-202ENST00000393243 CENPHQ9H3R5 247 aa16.05■□□□□ 0.16
GSE1-202ENST00000393243 FAM193AP78312 1265 aa16.05■□□□□ 0.16
GSE1-202ENST00000393243 CCDC191Q8NCU4 936 aa16.05■□□□□ 0.16
GSE1-202ENST00000393243 NINLQ9Y2I6 1382 aa16.05■□□□□ 0.16
GSE1-202ENST00000393243 KRT18P05783 430 aaKnown RBP16.04■□□□□ 0.16
GSE1-202ENST00000393243 KINO60870 393 aaKnown RBP16.04■□□□□ 0.16
GSE1-202ENST00000393243 XBP1P17861 261 aa16.04■□□□□ 0.16
GSE1-202ENST00000393243 MAGEC2Q9UBF1 373 aaPredicted RBP16.04■□□□□ 0.16
GSE1-202ENST00000393243 IBSPP21815 317 aaPredicted RBP16.04■□□□□ 0.16
GSE1-202ENST00000393243 RDXP35241 583 aaKnown RBP16.04■□□□□ 0.16
GSE1-202ENST00000393243 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
GSE1-202ENST00000393243 GNAI1P63096 354 aa16.04■□□□□ 0.16
GSE1-202ENST00000393243 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
GSE1-202ENST00000393243 MRE11P49959 708 aa16.03■□□□□ 0.16
GSE1-202ENST00000393243 ADAMTS8Q9UP79 889 aa16.03■□□□□ 0.16
GSE1-202ENST00000393243 PSMA5P28066 241 aa16.03■□□□□ 0.16
GSE1-202ENST00000393243 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms