RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 PPLO60437 1756 aa16.07■□□□□ 0.16
TRAF3IP2-208ENST00000392556 C1orf167Q5SNV9 1468 aa16.07■□□□□ 0.16
TRAF3IP2-208ENST00000392556 NALCNQ8IZF0 1738 aa16.06■□□□□ 0.16
TRAF3IP2-208ENST00000392556 LAMC1P11047 1609 aa16.06■□□□□ 0.16
TRAF3IP2-208ENST00000392556 ROBO2Q9HCK4 1378 aa16.05■□□□□ 0.16
TRAF3IP2-208ENST00000392556 CDK12Q9NYV4 1490 aaPredicted RBP16.05■□□□□ 0.16
TRAF3IP2-208ENST00000392556 MPHOSPH9Q99550 1183 aa16.04■□□□□ 0.16
TRAF3IP2-208ENST00000392556 TECPR2O15040 1411 aa16.03■□□□□ 0.16
TRAF3IP2-208ENST00000392556 SPATA31E1Q6ZUB1 1445 aa16.03■□□□□ 0.16
TRAF3IP2-208ENST00000392556 PNPLA6Q8IY17 1366 aa16.03■□□□□ 0.16
TRAF3IP2-208ENST00000392556 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.16
TRAF3IP2-208ENST00000392556 CDC42BPGQ6DT37 1551 aa16.02■□□□□ 0.15
TRAF3IP2-208ENST00000392556 RXRBP28702 533 aa16.02■□□□□ 0.15
TRAF3IP2-208ENST00000392556 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
TRAF3IP2-208ENST00000392556 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
TRAF3IP2-208ENST00000392556 ABCC11Q96J66 1382 aa16■□□□□ 0.15
TRAF3IP2-208ENST00000392556 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
TRAF3IP2-208ENST00000392556 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
TRAF3IP2-208ENST00000392556 NUTM2AQ8IVF1 878 aaPredicted RBP16■□□□□ 0.15
TRAF3IP2-208ENST00000392556 SIRT1Q96EB6 747 aa16■□□□□ 0.15
TRAF3IP2-208ENST00000392556 AFF2P51816 1311 aa15.98■□□□□ 0.15
TRAF3IP2-208ENST00000392556 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
TRAF3IP2-208ENST00000392556 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
TRAF3IP2-208ENST00000392556 ANO8Q9HCE9 1232 aaPredicted RBP15.98■□□□□ 0.15
TRAF3IP2-208ENST00000392556 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
TRAF3IP2-208ENST00000392556 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
TRAF3IP2-208ENST00000392556 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
TRAF3IP2-208ENST00000392556 FOXD1Q16676 465 aa15.97■□□□□ 0.15
TRAF3IP2-208ENST00000392556 KNDC1Q76NI1 1749 aa15.96■□□□□ 0.15
TRAF3IP2-208ENST00000392556 RGL3Q3MIN7 710 aa15.96■□□□□ 0.14
TRAF3IP2-208ENST00000392556 ORAI2Q96SN7 254 aa15.96■□□□□ 0.14
TRAF3IP2-208ENST00000392556 UBE2Q2Q8WVN8 375 aa15.95■□□□□ 0.14
TRAF3IP2-208ENST00000392556 MYOM2P54296 1465 aa15.95■□□□□ 0.14
TRAF3IP2-208ENST00000392556 RBM6P78332 1123 aaKnown RBP15.94■□□□□ 0.14
TRAF3IP2-208ENST00000392556 NRXN1Q9ULB1 1477 aa15.94■□□□□ 0.14
TRAF3IP2-208ENST00000392556 NGLY1Q96IV0 654 aa15.93■□□□□ 0.14
TRAF3IP2-208ENST00000392556 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
TRAF3IP2-208ENST00000392556 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
TRAF3IP2-208ENST00000392556 COL22A1Q8NFW1 1626 aaPredicted RBP15.93■□□□□ 0.14
TRAF3IP2-208ENST00000392556 YTHDC2Q9H6S0 1430 aaKnown RBP15.93■□□□□ 0.14
TRAF3IP2-208ENST00000392556 DDX17Q92841 729 aaKnown RBP15.93■□□□□ 0.14
TRAF3IP2-208ENST00000392556 C14orf93Q9H972 538 aaKnown RBP15.93■□□□□ 0.14
TRAF3IP2-208ENST00000392556 ESCO1Q5FWF5 840 aa15.92■□□□□ 0.14
TRAF3IP2-208ENST00000392556 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
TRAF3IP2-208ENST00000392556 QTRT2Q9H974 415 aaKnown RBP15.92■□□□□ 0.14
TRAF3IP2-208ENST00000392556 MSH5O43196 834 aa15.91■□□□□ 0.14
TRAF3IP2-208ENST00000392556 UPF1Q92900 1129 aaKnown RBP eCLIP15.9■□□□□ 0.14
TRAF3IP2-208ENST00000392556 FANCIQ9NVI1 1328 aa15.9■□□□□ 0.14
TRAF3IP2-208ENST00000392556 FNBP4Q8N3X1 1017 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP2-208ENST00000392556 STK26Q9P289 416 aa15.9■□□□□ 0.14
TRAF3IP2-208ENST00000392556 PXDNQ92626 1479 aa15.9■□□□□ 0.14
TRAF3IP2-208ENST00000392556 TRPC5Q9UL62 973 aaPredicted RBP15.89■□□□□ 0.13
TRAF3IP2-208ENST00000392556 KIF1AQ12756 1690 aa15.89■□□□□ 0.13
TRAF3IP2-208ENST00000392556 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
TRAF3IP2-208ENST00000392556 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
TRAF3IP2-208ENST00000392556 DLC1Q96QB1 1528 aa15.87■□□□□ 0.13
TRAF3IP2-208ENST00000392556 ADAMTS2O95450 1211 aa15.87■□□□□ 0.13
TRAF3IP2-208ENST00000392556 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
TRAF3IP2-208ENST00000392556 USP21Q9UK80 565 aa15.87■□□□□ 0.13
TRAF3IP2-208ENST00000392556 FMN2Q9NZ56 1722 aa15.86■□□□□ 0.13
TRAF3IP2-208ENST00000392556 FOXO3O43524 673 aa15.85■□□□□ 0.13
TRAF3IP2-208ENST00000392556 RGS12O14924 1447 aa15.85■□□□□ 0.13
TRAF3IP2-208ENST00000392556 PSME1Q06323 249 aa15.85■□□□□ 0.13
TRAF3IP2-208ENST00000392556 PLEKHH1Q9ULM0 1364 aa15.85■□□□□ 0.13
TRAF3IP2-208ENST00000392556 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
TRAF3IP2-208ENST00000392556 ATRNO75882 1429 aa15.83■□□□□ 0.13
TRAF3IP2-208ENST00000392556 ANKARQ7Z5J8 1434 aa15.83■□□□□ 0.13
TRAF3IP2-208ENST00000392556 SPATA31A3Q5VYP0 1347 aa15.83■□□□□ 0.13
TRAF3IP2-208ENST00000392556 DEKP35659 375 aaKnown RBP15.83■□□□□ 0.13
TRAF3IP2-208ENST00000392556 ATAD2Q6PL18 1390 aa15.82■□□□□ 0.12
TRAF3IP2-208ENST00000392556 CFAP70Q5T0N1 1121 aa15.82■□□□□ 0.12
TRAF3IP2-208ENST00000392556 SBNO1A3KN83 1393 aa15.81■□□□□ 0.12
TRAF3IP2-208ENST00000392556 PHF8Q9UPP1 1060 aa15.81■□□□□ 0.12
TRAF3IP2-208ENST00000392556 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
TRAF3IP2-208ENST00000392556 POGKQ9P215 609 aa15.8■□□□□ 0.12
TRAF3IP2-208ENST00000392556 ADGRB2O60241 1585 aa15.8■□□□□ 0.12
TRAF3IP2-208ENST00000392556 PRAM1Q96QH2 718 aa15.79■□□□□ 0.12
TRAF3IP2-208ENST00000392556 ARHGEF10O15013 1369 aa15.79■□□□□ 0.12
TRAF3IP2-208ENST00000392556 MARF1Q9Y4F3 1742 aaKnown RBP15.79■□□□□ 0.12
TRAF3IP2-208ENST00000392556 TNS3Q68CZ2 1445 aa15.79■□□□□ 0.12
TRAF3IP2-208ENST00000392556 ADGRB1O14514 1584 aa15.78■□□□□ 0.12
TRAF3IP2-208ENST00000392556 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
TRAF3IP2-208ENST00000392556 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.78■□□□□ 0.12
TRAF3IP2-208ENST00000392556 NUTM2FA1L443 756 aa15.77■□□□□ 0.12
TRAF3IP2-208ENST00000392556 CCDC125Q86Z20 511 aa15.77■□□□□ 0.12
TRAF3IP2-208ENST00000392556 XPCQ01831 940 aaPredicted RBP15.76■□□□□ 0.11
TRAF3IP2-208ENST00000392556 SLIT2O94813 1529 aa15.76■□□□□ 0.11
TRAF3IP2-208ENST00000392556 UNC5CLQ8IV45 518 aa15.76■□□□□ 0.11
TRAF3IP2-208ENST00000392556 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
TRAF3IP2-208ENST00000392556 SALL2Q9Y467 1007 aaPredicted RBP15.76■□□□□ 0.11
TRAF3IP2-208ENST00000392556 DCAF11Q8TEB1 546 aa15.74■□□□□ 0.11
TRAF3IP2-208ENST00000392556 USP32Q8NFA0 1604 aa15.73■□□□□ 0.11
TRAF3IP2-208ENST00000392556 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
TRAF3IP2-208ENST00000392556 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
TRAF3IP2-208ENST00000392556 TULP4Q9NRJ4 1543 aa15.72■□□□□ 0.11
TRAF3IP2-208ENST00000392556 FKBP8Q14318 412 aa15.72■□□□□ 0.11
TRAF3IP2-208ENST00000392556 TRAK1Q9UPV9 953 aa15.71■□□□□ 0.11
TRAF3IP2-208ENST00000392556 WASLO00401 505 aaPredicted RBP15.7■□□□□ 0.1
TRAF3IP2-208ENST00000392556 SAFB2Q14151 953 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRAF3IP2-208ENST00000392556 VPS72Q15906 364 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms