RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 PRAM1Q96QH2 718 aa24.64■■□□□ 1.54
STRADB-202ENST00000392249 RIMS2Q9UQ26 1411 aa24.64■■□□□ 1.54
STRADB-202ENST00000392249 USP32Q8NFA0 1604 aa24.63■■□□□ 1.53
STRADB-202ENST00000392249 B4GALNT3Q6L9W6 998 aa24.62■■□□□ 1.53
STRADB-202ENST00000392249 POGKQ9P215 609 aa24.62■■□□□ 1.53
STRADB-202ENST00000392249 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
STRADB-202ENST00000392249 MORC1Q86VD1 984 aa24.61■■□□□ 1.53
STRADB-202ENST00000392249 ANKRD36BQ8N2N9 1353 aa24.61■■□□□ 1.53
STRADB-202ENST00000392249 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
STRADB-202ENST00000392249 RCAN3Q9UKA8 241 aa24.6■■□□□ 1.53
STRADB-202ENST00000392249 CGNL1Q0VF96 1302 aa24.6■■□□□ 1.53
STRADB-202ENST00000392249 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
STRADB-202ENST00000392249 PLEKHH1Q9ULM0 1364 aa24.59■■□□□ 1.53
STRADB-202ENST00000392249 CCDC146Q8IYE0 955 aa24.57■■□□□ 1.52
STRADB-202ENST00000392249 SETD1AO15047 1707 aaKnown RBP24.56■■□□□ 1.52
STRADB-202ENST00000392249 RRP1P56182 461 aaKnown RBP24.56■■□□□ 1.52
STRADB-202ENST00000392249 POLR3AO14802 1390 aaPredicted RBP24.55■■□□□ 1.52
STRADB-202ENST00000392249 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
STRADB-202ENST00000392249 NINLQ9Y2I6 1382 aa24.54■■□□□ 1.52
STRADB-202ENST00000392249 ATAD2Q6PL18 1390 aa24.53■■□□□ 1.52
STRADB-202ENST00000392249 TNRQ92752 1358 aa24.53■■□□□ 1.52
STRADB-202ENST00000392249 NRXN3Q9Y4C0 1643 aa24.52■■□□□ 1.52
STRADB-202ENST00000392249 ZNF521Q96K83 1311 aa24.51■■□□□ 1.51
STRADB-202ENST00000392249 NSD2O96028 1365 aa24.5■■□□□ 1.51
STRADB-202ENST00000392249 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.5■■□□□ 1.51
STRADB-202ENST00000392249 DLC1Q96QB1 1528 aa24.5■■□□□ 1.51
STRADB-202ENST00000392249 SHPRHQ149N8 1683 aa24.5■■□□□ 1.51
STRADB-202ENST00000392249 APAF1O14727 1248 aa24.49■■□□□ 1.51
STRADB-202ENST00000392249 WAPLQ7Z5K2 1190 aa24.49■■□□□ 1.51
STRADB-202ENST00000392249 CDK19Q9BWU1 502 aa24.49■■□□□ 1.51
STRADB-202ENST00000392249 ABCC11Q96J66 1382 aa24.48■■□□□ 1.51
STRADB-202ENST00000392249 MTHFSP49914 203 aa24.47■■□□□ 1.51
STRADB-202ENST00000392249 CD163L1Q9NR16 1453 aa24.46■■□□□ 1.51
STRADB-202ENST00000392249 GOLGA2Q08379 1002 aa24.46■■□□□ 1.51
STRADB-202ENST00000392249 TERF2IPQ9NYB0 399 aa24.46■■□□□ 1.51
STRADB-202ENST00000392249 METP08581 1390 aa24.46■■□□□ 1.51
STRADB-202ENST00000392249 UBR1Q8IWV7 1749 aa24.45■■□□□ 1.51
STRADB-202ENST00000392249 CCDC136Q96JN2 1154 aa24.45■■□□□ 1.5
STRADB-202ENST00000392249 DUSP27Q5VZP5 1158 aa24.44■■□□□ 1.5
STRADB-202ENST00000392249 HDGFP51858 240 aaKnown RBP24.42■■□□□ 1.5
STRADB-202ENST00000392249 GGNBP2Q9H3C7 697 aa24.42■■□□□ 1.5
STRADB-202ENST00000392249 TMEM2Q9UHN6 1383 aa24.42■■□□□ 1.5
STRADB-202ENST00000392249 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
STRADB-202ENST00000392249 EXOC6Q8TAG9 804 aa24.41■■□□□ 1.5
STRADB-202ENST00000392249 CFAP53Q96M91 514 aa24.41■■□□□ 1.5
STRADB-202ENST00000392249 PLIN1O60240 522 aa24.4■■□□□ 1.5
STRADB-202ENST00000392249 CEBPAP49715 358 aaPredicted RBP24.4■■□□□ 1.5
STRADB-202ENST00000392249 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
STRADB-202ENST00000392249 SLFN5Q08AF3 891 aa24.39■■□□□ 1.5
STRADB-202ENST00000392249 RBM19Q9Y4C8 960 aaKnown RBP24.39■■□□□ 1.5
STRADB-202ENST00000392249 TXNDC2Q86VQ3 553 aa24.39■■□□□ 1.49
STRADB-202ENST00000392249 ANKRD26Q9UPS8 1709 aa24.38■■□□□ 1.49
STRADB-202ENST00000392249 FYB1O15117 783 aa24.37■■□□□ 1.49
STRADB-202ENST00000392249 SPINK5Q9NQ38 1064 aaPredicted RBP24.37■■□□□ 1.49
STRADB-202ENST00000392249 NLRP1Q9C000 1473 aa24.37■■□□□ 1.49
STRADB-202ENST00000392249 KNDC1Q76NI1 1749 aa24.35■■□□□ 1.49
STRADB-202ENST00000392249 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
STRADB-202ENST00000392249 NGEFQ8N5V2 710 aa24.35■■□□□ 1.49
STRADB-202ENST00000392249 TRMT2AQ8IZ69 625 aaKnown RBP24.34■■□□□ 1.49
STRADB-202ENST00000392249 RUNDC1Q96C34 613 aa24.34■■□□□ 1.49
STRADB-202ENST00000392249 MED14O60244 1454 aa24.34■■□□□ 1.49
STRADB-202ENST00000392249 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
STRADB-202ENST00000392249 DMRT2Q9Y5R5 561 aa24.33■■□□□ 1.49
STRADB-202ENST00000392249 C3P01024 1663 aa24.33■■□□□ 1.49
STRADB-202ENST00000392249 KIF20BQ96Q89 1820 aa24.33■■□□□ 1.49
STRADB-202ENST00000392249 WASLO00401 505 aaPredicted RBP24.32■■□□□ 1.48
STRADB-202ENST00000392249 TECPR2O15040 1411 aa24.32■■□□□ 1.48
STRADB-202ENST00000392249 ATP7BP35670 1465 aa24.32■■□□□ 1.48
STRADB-202ENST00000392249 CPS1P31327 1500 aa24.31■■□□□ 1.48
STRADB-202ENST00000392249 IQSEC2Q5JU85 1478 aa24.31■■□□□ 1.48
STRADB-202ENST00000392249 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
STRADB-202ENST00000392249 E9PSI1 815 aa24.31■■□□□ 1.48
STRADB-202ENST00000392249 NEUROD2Q15784 382 aa24.31■■□□□ 1.48
STRADB-202ENST00000392249 FER1L4A9Z1Z3 1794 aa24.31■■□□□ 1.48
STRADB-202ENST00000392249 ADAMTS13Q76LX8 1427 aa24.31■■□□□ 1.48
STRADB-202ENST00000392249 LTKP29376 864 aa24.3■■□□□ 1.48
STRADB-202ENST00000392249 WWC1Q8IX03 1113 aa24.3■■□□□ 1.48
STRADB-202ENST00000392249 RRP7AQ9Y3A4 280 aaKnown RBP24.3■■□□□ 1.48
STRADB-202ENST00000392249 TCP11L2Q8N4U5 519 aa24.3■■□□□ 1.48
STRADB-202ENST00000392249 U2AF1L5P0DN76 240 aaPredicted RBP24.29■■□□□ 1.48
STRADB-202ENST00000392249 U2AF1Q01081 240 aaKnown RBP eCLIP24.29■■□□□ 1.48
STRADB-202ENST00000392249 NKTRP30414 1462 aaKnown RBP24.29■■□□□ 1.48
STRADB-202ENST00000392249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.29■■□□□ 1.483e-6■■■□□ 14.9
STRADB-202ENST00000392249 PPIP5K1Q6PFW1 1433 aa24.28■■□□□ 1.48
STRADB-202ENST00000392249 SIRT1Q96EB6 747 aa24.27■■□□□ 1.48
STRADB-202ENST00000392249 PLEKHG1Q9ULL1 1385 aa24.27■■□□□ 1.48
STRADB-202ENST00000392249 CRBNQ96SW2 442 aa24.27■■□□□ 1.48
STRADB-202ENST00000392249 C20orf194Q5TEA3 1177 aa24.26■■□□□ 1.47
STRADB-202ENST00000392249 COL3A1P02461 1466 aaPredicted RBP24.26■■□□□ 1.47
STRADB-202ENST00000392249 ROBO2Q9HCK4 1378 aa24.25■■□□□ 1.47
STRADB-202ENST00000392249 NUDT16Q96DE0 195 aaKnown RBP24.24■■□□□ 1.47
STRADB-202ENST00000392249 U2SURPO15042 1029 aaKnown RBP24.23■■□□□ 1.47
STRADB-202ENST00000392249 NCKAP5LQ9HCH0 1330 aa24.23■■□□□ 1.47
STRADB-202ENST00000392249 CPSF1Q10570 1443 aaKnown RBP24.23■■□□□ 1.47
STRADB-202ENST00000392249 EID1Q9Y6B2 187 aa24.22■■□□□ 1.47
STRADB-202ENST00000392249 SLC26A8Q96RN1 970 aa24.21■■□□□ 1.47
STRADB-202ENST00000392249 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
STRADB-202ENST00000392249 EDC4Q6P2E9 1401 aaKnown RBP24.2■■□□□ 1.46
STRADB-202ENST00000392249 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.2■■□□□ 1.46
STRADB-202ENST00000392249 CCDC61Q9Y6R9 512 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms