RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 CABP2Q9NPB3 220 aa25.4■■□□□ 1.66
ERCC2-203ENST00000391944 ANKRD36BQ8N2N9 1353 aa25.4■■□□□ 1.66
ERCC2-203ENST00000391944 PRAM1Q96QH2 718 aa25.39■■□□□ 1.66
ERCC2-203ENST00000391944 NINLQ9Y2I6 1382 aa25.38■■□□□ 1.65
ERCC2-203ENST00000391944 CDCA7LQ96GN5 454 aa25.38■■□□□ 1.65
ERCC2-203ENST00000391944 MORC1Q86VD1 984 aa25.37■■□□□ 1.65
ERCC2-203ENST00000391944 POGKQ9P215 609 aa25.37■■□□□ 1.65
ERCC2-203ENST00000391944 CGNL1Q0VF96 1302 aa25.37■■□□□ 1.65
ERCC2-203ENST00000391944 POLR3AO14802 1390 aaPredicted RBP25.36■■□□□ 1.65
ERCC2-203ENST00000391944 RCAN3Q9UKA8 241 aa25.35■■□□□ 1.65
ERCC2-203ENST00000391944 SRPK2P78362 688 aaKnown RBP25.34■■□□□ 1.65
ERCC2-203ENST00000391944 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.34■■□□□ 1.65
ERCC2-203ENST00000391944 SETD1AO15047 1707 aaKnown RBP25.34■■□□□ 1.65
ERCC2-203ENST00000391944 MINK1Q8N4C8 1332 aaPredicted RBP25.33■■□□□ 1.65
ERCC2-203ENST00000391944 ATAD2Q6PL18 1390 aa25.33■■□□□ 1.65
ERCC2-203ENST00000391944 DLC1Q96QB1 1528 aa25.33■■□□□ 1.64
ERCC2-203ENST00000391944 NSD2O96028 1365 aa25.32■■□□□ 1.64
ERCC2-203ENST00000391944 TNRQ92752 1358 aa25.31■■□□□ 1.64
ERCC2-203ENST00000391944 PLEKHH1Q9ULM0 1364 aa25.31■■□□□ 1.64
ERCC2-203ENST00000391944 ZNF521Q96K83 1311 aa25.3■■□□□ 1.64
ERCC2-203ENST00000391944 RRP1P56182 461 aaKnown RBP25.29■■□□□ 1.64
ERCC2-203ENST00000391944 B4GALNT3Q6L9W6 998 aa25.29■■□□□ 1.64
ERCC2-203ENST00000391944 ABCC11Q96J66 1382 aa25.28■■□□□ 1.64
ERCC2-203ENST00000391944 HDGFP51858 240 aaKnown RBP25.28■■□□□ 1.64
ERCC2-203ENST00000391944 NRXN3Q9Y4C0 1643 aa25.28■■□□□ 1.64
ERCC2-203ENST00000391944 A0A1W2PP64 1363 aa25.28■■□□□ 1.64
ERCC2-203ENST00000391944 CDK19Q9BWU1 502 aa25.26■■□□□ 1.63
ERCC2-203ENST00000391944 TNNT2P45379 298 aaPredicted RBP25.25■■□□□ 1.63
ERCC2-203ENST00000391944 TERF2IPQ9NYB0 399 aa25.25■■□□□ 1.63
ERCC2-203ENST00000391944 CCDC146Q8IYE0 955 aa25.25■■□□□ 1.63
ERCC2-203ENST00000391944 NGEFQ8N5V2 710 aa25.24■■□□□ 1.63
ERCC2-203ENST00000391944 GOLGA2Q08379 1002 aa25.23■■□□□ 1.63
ERCC2-203ENST00000391944 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
ERCC2-203ENST00000391944 UBR1Q8IWV7 1749 aa25.22■■□□□ 1.63
ERCC2-203ENST00000391944 CD163L1Q9NR16 1453 aa25.22■■□□□ 1.63
ERCC2-203ENST00000391944 APAF1O14727 1248 aa25.22■■□□□ 1.63
ERCC2-203ENST00000391944 WAPLQ7Z5K2 1190 aa25.22■■□□□ 1.63
ERCC2-203ENST00000391944 MTHFSP49914 203 aa25.21■■□□□ 1.63
ERCC2-203ENST00000391944 TMEM2Q9UHN6 1383 aa25.21■■□□□ 1.63
ERCC2-203ENST00000391944 DUSP27Q5VZP5 1158 aa25.2■■□□□ 1.63
ERCC2-203ENST00000391944 METP08581 1390 aa25.2■■□□□ 1.62
ERCC2-203ENST00000391944 CFAP53Q96M91 514 aa25.19■■□□□ 1.62
ERCC2-203ENST00000391944 MED14O60244 1454 aa25.17■■□□□ 1.62
ERCC2-203ENST00000391944 SLFN5Q08AF3 891 aa25.17■■□□□ 1.62
ERCC2-203ENST00000391944 HDGFL2Q7Z4V5 671 aaPredicted RBP25.17■■□□□ 1.62
ERCC2-203ENST00000391944 SIRT1Q96EB6 747 aa25.17■■□□□ 1.62
ERCC2-203ENST00000391944 CABP1Q9NZU7 370 aa25.17■■□□□ 1.62
ERCC2-203ENST00000391944 NLRP1Q9C000 1473 aa25.16■■□□□ 1.62
ERCC2-203ENST00000391944 TRMT2AQ8IZ69 625 aaKnown RBP25.16■■□□□ 1.62
ERCC2-203ENST00000391944 CCDC136Q96JN2 1154 aa25.16■■□□□ 1.62
ERCC2-203ENST00000391944 KNDC1Q76NI1 1749 aa25.15■■□□□ 1.62
ERCC2-203ENST00000391944 FYB1O15117 783 aa25.15■■□□□ 1.62
ERCC2-203ENST00000391944 ANKRD26Q9UPS8 1709 aa25.14■■□□□ 1.62
ERCC2-203ENST00000391944 TECPR2O15040 1411 aa25.14■■□□□ 1.62
ERCC2-203ENST00000391944 FAM135BQ49AJ0 1406 aa25.14■■□□□ 1.61
ERCC2-203ENST00000391944 GGNBP2Q9H3C7 697 aa25.13■■□□□ 1.61
ERCC2-203ENST00000391944 TXNDC2Q86VQ3 553 aa25.12■■□□□ 1.61
ERCC2-203ENST00000391944 RUNDC1Q96C34 613 aa25.12■■□□□ 1.61
ERCC2-203ENST00000391944 ATP7BP35670 1465 aa25.11■■□□□ 1.61
ERCC2-203ENST00000391944 WASLO00401 505 aaPredicted RBP25.11■■□□□ 1.61
ERCC2-203ENST00000391944 CEBPAP49715 358 aaPredicted RBP25.11■■□□□ 1.61
ERCC2-203ENST00000391944 EXOC6Q8TAG9 804 aa25.11■■□□□ 1.61
ERCC2-203ENST00000391944 RBM19Q9Y4C8 960 aaKnown RBP25.09■■□□□ 1.61
ERCC2-203ENST00000391944 C3P01024 1663 aa25.09■■□□□ 1.61
ERCC2-203ENST00000391944 E9PSI1 815 aa25.09■■□□□ 1.61
ERCC2-203ENST00000391944 CPS1P31327 1500 aa25.09■■□□□ 1.61
ERCC2-203ENST00000391944 ADAMTS13Q76LX8 1427 aa25.08■■□□□ 1.61
ERCC2-203ENST00000391944 SPINK5Q9NQ38 1064 aaPredicted RBP25.08■■□□□ 1.61
ERCC2-203ENST00000391944 PLEKHG1Q9ULL1 1385 aa25.07■■□□□ 1.6
ERCC2-203ENST00000391944 LTKP29376 864 aa25.07■■□□□ 1.6
ERCC2-203ENST00000391944 PLIN1O60240 522 aa25.06■■□□□ 1.6
ERCC2-203ENST00000391944 TRHP20396 242 aaPredicted RBP25.06■■□□□ 1.6
ERCC2-203ENST00000391944 WWC1Q8IX03 1113 aa25.06■■□□□ 1.6
ERCC2-203ENST00000391944 KIF20BQ96Q89 1820 aa25.06■■□□□ 1.6
ERCC2-203ENST00000391944 IQSEC2Q5JU85 1478 aa25.05■■□□□ 1.6
ERCC2-203ENST00000391944 FER1L4A9Z1Z3 1794 aa25.05■■□□□ 1.6
ERCC2-203ENST00000391944 TCP11L2Q8N4U5 519 aa25.04■■□□□ 1.6
ERCC2-203ENST00000391944 NKTRP30414 1462 aaKnown RBP25.04■■□□□ 1.6
ERCC2-203ENST00000391944 CPSF1Q10570 1443 aaKnown RBP25.03■■□□□ 1.6
ERCC2-203ENST00000391944 NCBP3Q53F19 620 aaKnown RBP25.03■■□□□ 1.6
ERCC2-203ENST00000391944 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
ERCC2-203ENST00000391944 DMRT2Q9Y5R5 561 aa25.02■■□□□ 1.6
ERCC2-203ENST00000391944 U2AF1L5P0DN76 240 aaPredicted RBP25.02■■□□□ 1.6
ERCC2-203ENST00000391944 U2AF1Q01081 240 aaKnown RBP eCLIP25.02■■□□□ 1.6
ERCC2-203ENST00000391944 COL3A1P02461 1466 aaPredicted RBP25.01■■□□□ 1.59
ERCC2-203ENST00000391944 PPIP5K1Q6PFW1 1433 aa25.01■■□□□ 1.59
ERCC2-203ENST00000391944 NUDT16Q96DE0 195 aaKnown RBP25.01■■□□□ 1.59
ERCC2-203ENST00000391944 EID1Q9Y6B2 187 aa25.01■■□□□ 1.59
ERCC2-203ENST00000391944 SLIT1O75093 1534 aa25.01■■□□□ 1.59
ERCC2-203ENST00000391944 ROBO2Q9HCK4 1378 aa25■■□□□ 1.59
ERCC2-203ENST00000391944 ARHGAP23Q9P227 1491 aa25■■□□□ 1.59
ERCC2-203ENST00000391944 CCDC27Q2M243 656 aa25■■□□□ 1.59
ERCC2-203ENST00000391944 CCDC61Q9Y6R9 512 aa24.99■■□□□ 1.59
ERCC2-203ENST00000391944 EDC4Q6P2E9 1401 aaKnown RBP24.98■■□□□ 1.59
ERCC2-203ENST00000391944 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
ERCC2-203ENST00000391944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.98■■□□□ 1.59
ERCC2-203ENST00000391944 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.97■■□□□ 1.59
ERCC2-203ENST00000391944 RRP7AQ9Y3A4 280 aaKnown RBP24.97■■□□□ 1.59
ERCC2-203ENST00000391944 NEUROD2Q15784 382 aa24.97■■□□□ 1.59
ERCC2-203ENST00000391944 WDR63Q8IWG1 891 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms