RNA–Protein interactions for RNA: ENST00000391307.1

RNU1-139P-201, Transcript of RNA, U1 small nuclear 139, pseudogene, humanhuman

BASIC

Gene RNU1-139P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-139P-201ENST00000391307 PRKCSHP14314 528 aaPredicted RBP5.53□□□□□ -1.52
RNU1-139P-201ENST00000391307 CSPP1Q1MSJ5 1256 aa5.53□□□□□ -1.52
RNU1-139P-201ENST00000391307 Q3C1V9 767 aa5.53□□□□□ -1.52
RNU1-139P-201ENST00000391307 ANKLE1Q8NAG6 615 aa5.53□□□□□ -1.52
RNU1-139P-201ENST00000391307 USB1Q9BQ65 265 aaKnown RBP5.53□□□□□ -1.52
RNU1-139P-201ENST00000391307 KDM4CQ9H3R0 1056 aa5.53□□□□□ -1.52
RNU1-139P-201ENST00000391307 LIAT1Q6ZQX7 453 aa5.52□□□□□ -1.53
RNU1-139P-201ENST00000391307 SALL2Q9Y467 1007 aaPredicted RBP5.52□□□□□ -1.53
RNU1-139P-201ENST00000391307 MSS51Q4VC12 460 aa5.51□□□□□ -1.53
RNU1-139P-201ENST00000391307 MYSM1Q5VVJ2 828 aa5.51□□□□□ -1.53
RNU1-139P-201ENST00000391307 RSBN1LQ6PCB5 846 aaPredicted RBP5.51□□□□□ -1.53
RNU1-139P-201ENST00000391307 CABLES1Q8TDN4 633 aa5.51□□□□□ -1.53
RNU1-139P-201ENST00000391307 FAM117AQ9C073 453 aa5.51□□□□□ -1.53
RNU1-139P-201ENST00000391307 LIMD1Q9UGP4 676 aa5.51□□□□□ -1.53
RNU1-139P-201ENST00000391307 PCDHB15Q9Y5E8 787 aa5.51□□□□□ -1.53
RNU1-139P-201ENST00000391307 SLC19A1P41440 591 aa5.5□□□□□ -1.53
RNU1-139P-201ENST00000391307 NEUROD2Q15784 382 aa5.5□□□□□ -1.53
RNU1-139P-201ENST00000391307 RIC3Q7Z5B4 369 aa5.5□□□□□ -1.53
RNU1-139P-201ENST00000391307 IRX2Q9BZI1 471 aaPredicted RBP5.5□□□□□ -1.53
RNU1-139P-201ENST00000391307 RETREG3Q86VR2 466 aa5.49□□□□□ -1.53
RNU1-139P-201ENST00000391307 CCDC24Q8N4L8 307 aa5.49□□□□□ -1.53
RNU1-139P-201ENST00000391307 POLR3EQ9NVU0 708 aa5.49□□□□□ -1.53
RNU1-139P-201ENST00000391307 V9GY48 417 aaPredicted RBP5.49□□□□□ -1.53
RNU1-139P-201ENST00000391307 PLEKHG3A1L390 1219 aa5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 SPTLC1O15269 473 aa5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 DXOO77932 396 aaKnown RBP5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 JUNDP17535 347 aa5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 MMP16P51512 607 aa5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 MTMR2Q13614 643 aa5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 QPCTQ16769 361 aa5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 SPRYD7Q5W111 196 aa5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 PRR7Q8TB68 274 aa5.48□□□□□ -1.53
RNU1-139P-201ENST00000391307 CFAP99D6REC4 459 aa5.47□□□□□ -1.53
RNU1-139P-201ENST00000391307 TNFRSF10AO00220 468 aa5.47□□□□□ -1.53
RNU1-139P-201ENST00000391307 HRCP23327 699 aa5.47□□□□□ -1.53
RNU1-139P-201ENST00000391307 CLK2P49760 499 aaKnown RBP5.47□□□□□ -1.53
RNU1-139P-201ENST00000391307 BRPF1P55201 1214 aaPredicted RBP5.47□□□□□ -1.53
RNU1-139P-201ENST00000391307 ZNF697Q5TEC3 545 aa5.47□□□□□ -1.53
RNU1-139P-201ENST00000391307 TRIM67Q6ZTA4 783 aa5.47□□□□□ -1.53
RNU1-139P-201ENST00000391307 TSC1Q92574 1164 aa5.47□□□□□ -1.53
RNU1-139P-201ENST00000391307 GFRA3O60609 400 aa5.46□□□□□ -1.54
RNU1-139P-201ENST00000391307 DIXDC1Q155Q3 683 aa5.46□□□□□ -1.54
RNU1-139P-201ENST00000391307 NUDT12Q9BQG2 462 aa5.46□□□□□ -1.54
RNU1-139P-201ENST00000391307 ZBTB3Q9H5J0 574 aa5.46□□□□□ -1.54
RNU1-139P-201ENST00000391307 ATP1B4Q9UN42 357 aaPredicted RBP5.46□□□□□ -1.54
RNU1-139P-201ENST00000391307 FOXC1Q12948 553 aa5.45□□□□□ -1.54
RNU1-139P-201ENST00000391307 FBXO31Q5XUX0 539 aaPredicted RBP5.45□□□□□ -1.54
RNU1-139P-201ENST00000391307 PTCRAQ6ISU1 281 aaPredicted RBP5.45□□□□□ -1.54
RNU1-139P-201ENST00000391307 ZNF598Q86UK7 904 aaKnown RBP5.45□□□□□ -1.54
RNU1-139P-201ENST00000391307 PROCA1Q8NCQ7 364 aaPredicted RBP5.45□□□□□ -1.54
RNU1-139P-201ENST00000391307 PDZRN3Q9UPQ7 1066 aa5.45□□□□□ -1.54
RNU1-139P-201ENST00000391307 NUTM2BA6NNL0 878 aaPredicted RBP5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 NUTM2EB1AL46 878 aaPredicted RBP5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 ZBTB24O43167 697 aaPredicted RBP5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 GJA5P36382 358 aa5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 RTL5Q5HYW3 569 aaPredicted RBP5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 NUTM2DQ5VT03 806 aaPredicted RBP5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 Q6ZNB5 142 aa5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 NUTM2AQ8IVF1 878 aaPredicted RBP5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 IL27Q8NEV9 243 aa5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 DDRGK1Q96HY6 314 aa5.44□□□□□ -1.54
RNU1-139P-201ENST00000391307 PER1O15534 1290 aaPredicted RBP5.43□□□□□ -1.54
RNU1-139P-201ENST00000391307 TRIM32Q13049 653 aa5.43□□□□□ -1.54
RNU1-139P-201ENST00000391307 SH3D19Q5HYK7 790 aa5.43□□□□□ -1.54
RNU1-139P-201ENST00000391307 RSPH6AQ9H0K4 717 aa5.43□□□□□ -1.54
RNU1-139P-201ENST00000391307 LILRB3O75022 631 aa5.42□□□□□ -1.54
RNU1-139P-201ENST00000391307 CCNYL3P0C7X3 344 aa5.42□□□□□ -1.54
RNU1-139P-201ENST00000391307 RPIAP49247 311 aa5.42□□□□□ -1.54
RNU1-139P-201ENST00000391307 LINC01559Q495D7 138 aa5.42□□□□□ -1.54
RNU1-139P-201ENST00000391307 PRPF38BQ5VTL8 546 aaKnown RBP5.42□□□□□ -1.54
RNU1-139P-201ENST00000391307 PKD2L1Q9P0L9 805 aa5.42□□□□□ -1.54
RNU1-139P-201ENST00000391307 MAP10Q9P2G4 905 aa5.42□□□□□ -1.54
RNU1-139P-201ENST00000391307 SPDYE5A6NIY4 337 aa5.41□□□□□ -1.54
RNU1-139P-201ENST00000391307 NRG2O14511 850 aaPredicted RBP5.41□□□□□ -1.54
RNU1-139P-201ENST00000391307 GDF9O60383 454 aa5.41□□□□□ -1.54
RNU1-139P-201ENST00000391307 CD2BP2O95400 341 aaKnown RBP5.41□□□□□ -1.54
RNU1-139P-201ENST00000391307 CTHP32929 405 aa5.41□□□□□ -1.54
RNU1-139P-201ENST00000391307 SKOR1P84550 965 aa5.41□□□□□ -1.54
RNU1-139P-201ENST00000391307 SKIV2LQ15477 1246 aaKnown RBP5.41□□□□□ -1.54
RNU1-139P-201ENST00000391307 PTPRNQ16849 979 aa5.41□□□□□ -1.54
RNU1-139P-201ENST00000391307 LCE2BO14633 110 aa5.4□□□□□ -1.54
RNU1-139P-201ENST00000391307 UNC93B1Q9H1C4 597 aa5.4□□□□□ -1.54
RNU1-139P-201ENST00000391307 KCNH2Q12809 1159 aa5.39□□□□□ -1.55
RNU1-139P-201ENST00000391307 TUSC1Q2TAM9 212 aa5.39□□□□□ -1.55
RNU1-139P-201ENST00000391307 DESI1Q6ICB0 168 aa5.39□□□□□ -1.55
RNU1-139P-201ENST00000391307 LYPD8Q6UX82 237 aa5.39□□□□□ -1.55
RNU1-139P-201ENST00000391307 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.39□□□□□ -1.55
RNU1-139P-201ENST00000391307 EVA1BQ9NVM1 165 aa5.39□□□□□ -1.55
RNU1-139P-201ENST00000391307 FAM187AA6NFU0 413 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 F12P00748 615 aaPredicted RBP5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 PRR20EP86478 221 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 PRR20CP86479 221 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 PRR20DP86480 221 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 PRR20BP86481 221 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 PRR20AP86496 221 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 CTDSPL2Q05D32 466 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 HELBQ8NG08 1087 aaPredicted RBP5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 BAP1Q92560 729 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 MRGPRX2Q96LB1 330 aa5.38□□□□□ -1.55
RNU1-139P-201ENST00000391307 SH3BP2P78314 561 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms