RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 SH3D19Q5HYK7 790 aa13.14□□□□□ -0.31
SNORA40.4-201ENST00000390971 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
SNORA40.4-201ENST00000390971 TUSC1Q2TAM9 212 aa13.12□□□□□ -0.31
SNORA40.4-201ENST00000390971 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
SNORA40.4-201ENST00000390971 C6orf229H3BNL8 230 aa13.11□□□□□ -0.31
SNORA40.4-201ENST00000390971 GGCXP38435 758 aa13.11□□□□□ -0.31
SNORA40.4-201ENST00000390971 CLK2P49760 499 aaKnown RBP13.11□□□□□ -0.31
SNORA40.4-201ENST00000390971 USB1Q9BQ65 265 aaKnown RBP13.11□□□□□ -0.31
SNORA40.4-201ENST00000390971 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
SNORA40.4-201ENST00000390971 SLC6A16Q9GZN6 736 aa13.1□□□□□ -0.31
SNORA40.4-201ENST00000390971 LIMD1Q9UGP4 676 aa13.1□□□□□ -0.31
SNORA40.4-201ENST00000390971 PCDHB15Q9Y5E8 787 aa13.1□□□□□ -0.31
SNORA40.4-201ENST00000390971 A0A0G2JS52 829 aa13.09□□□□□ -0.31
SNORA40.4-201ENST00000390971 SPDYE5A6NIY4 337 aa13.09□□□□□ -0.31
SNORA40.4-201ENST00000390971 MTMR2Q13614 643 aa13.08□□□□□ -0.32
SNORA40.4-201ENST00000390971 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
SNORA40.4-201ENST00000390971 PRPF38BQ5VTL8 546 aaKnown RBP13.08□□□□□ -0.32
SNORA40.4-201ENST00000390971 RETREG3Q86VR2 466 aa13.08□□□□□ -0.32
SNORA40.4-201ENST00000390971 FAM160A2Q8N612 972 aaPredicted RBP13.08□□□□□ -0.32
SNORA40.4-201ENST00000390971 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.32
SNORA40.4-201ENST00000390971 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
SNORA40.4-201ENST00000390971 ATP1B4Q9UN42 357 aaPredicted RBP13.08□□□□□ -0.32
SNORA40.4-201ENST00000390971 CSPP1Q1MSJ5 1256 aa13.07□□□□□ -0.32
SNORA40.4-201ENST00000390971 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
SNORA40.4-201ENST00000390971 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.07□□□□□ -0.32
SNORA40.4-201ENST00000390971 S1PR4O95977 384 aa13.05□□□□□ -0.32
SNORA40.4-201ENST00000390971 PCMTD1Q96MG8 357 aaPredicted RBP13.05□□□□□ -0.32
SNORA40.4-201ENST00000390971 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
SNORA40.4-201ENST00000390971 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
SNORA40.4-201ENST00000390971 HRCP23327 699 aa13.04□□□□□ -0.32
SNORA40.4-201ENST00000390971 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
SNORA40.4-201ENST00000390971 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
SNORA40.4-201ENST00000390971 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
SNORA40.4-201ENST00000390971 LILRB3O75022 631 aa13.03□□□□□ -0.32
SNORA40.4-201ENST00000390971 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
SNORA40.4-201ENST00000390971 QPCTQ16769 361 aa13.01□□□□□ -0.33
SNORA40.4-201ENST00000390971 PRR7Q8TB68 274 aa13.01□□□□□ -0.33
SNORA40.4-201ENST00000390971 RNF223E7ERA6 249 aa13□□□□□ -0.33
SNORA40.4-201ENST00000390971 MMP16P51512 607 aa13□□□□□ -0.33
SNORA40.4-201ENST00000390971 GNL3Q9BVP2 549 aaKnown RBP eCLIP13□□□□□ -0.33
SNORA40.4-201ENST00000390971 DXOO77932 396 aaKnown RBP12.98□□□□□ -0.33
SNORA40.4-201ENST00000390971 JUNDP17535 347 aa12.98□□□□□ -0.33
SNORA40.4-201ENST00000390971 ANKLE1Q8NAG6 615 aa12.98□□□□□ -0.33
SNORA40.4-201ENST00000390971 PRDM9Q9NQV7 894 aa12.98□□□□□ -0.33
SNORA40.4-201ENST00000390971 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
SNORA40.4-201ENST00000390971 DESI1Q6ICB0 168 aa12.97□□□□□ -0.33
SNORA40.4-201ENST00000390971 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
SNORA40.4-201ENST00000390971 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.33
SNORA40.4-201ENST00000390971 RGS20O76081 388 aa12.95□□□□□ -0.34
SNORA40.4-201ENST00000390971 CFAP99D6REC4 459 aa12.94□□□□□ -0.34
SNORA40.4-201ENST00000390971 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
SNORA40.4-201ENST00000390971 TMEM132AQ24JP5 1023 aa12.91□□□□□ -0.34
SNORA40.4-201ENST00000390971 HELBQ8NG08 1087 aaPredicted RBP12.91□□□□□ -0.34
SNORA40.4-201ENST00000390971 TSC1Q92574 1164 aa12.9□□□□□ -0.34
SNORA40.4-201ENST00000390971 PTPRNQ16849 979 aa12.89□□□□□ -0.35
SNORA40.4-201ENST00000390971 LYPD8Q6UX82 237 aa12.89□□□□□ -0.35
SNORA40.4-201ENST00000390971 FBXO31Q5XUX0 539 aaPredicted RBP12.88□□□□□ -0.35
SNORA40.4-201ENST00000390971 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
SNORA40.4-201ENST00000390971 NUDT12Q9BQG2 462 aa12.88□□□□□ -0.35
SNORA40.4-201ENST00000390971 RFC5P40937 340 aa12.87□□□□□ -0.35
SNORA40.4-201ENST00000390971 SLC19A1P41440 591 aa12.86□□□□□ -0.35
SNORA40.4-201ENST00000390971 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
SNORA40.4-201ENST00000390971 PRKD2Q9BZL6 878 aa12.86□□□□□ -0.35
SNORA40.4-201ENST00000390971 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
SNORA40.4-201ENST00000390971 ZBTB24O43167 697 aaPredicted RBP12.85□□□□□ -0.35
SNORA40.4-201ENST00000390971 CCNYL3P0C7X3 344 aa12.85□□□□□ -0.35
SNORA40.4-201ENST00000390971 EVA1BQ9NVM1 165 aa12.85□□□□□ -0.35
SNORA40.4-201ENST00000390971 AP1G2O75843 785 aa12.84□□□□□ -0.35
SNORA40.4-201ENST00000390971 RPIAP49247 311 aa12.84□□□□□ -0.35
SNORA40.4-201ENST00000390971 PLA2G2CQ5R387 149 aa12.84□□□□□ -0.35
SNORA40.4-201ENST00000390971 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
SNORA40.4-201ENST00000390971 LIAT1Q6ZQX7 453 aa12.82□□□□□ -0.36
SNORA40.4-201ENST00000390971 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
SNORA40.4-201ENST00000390971 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
SNORA40.4-201ENST00000390971 KCNH2Q12809 1159 aa12.81□□□□□ -0.36
SNORA40.4-201ENST00000390971 EMID1Q96A84 441 aaPredicted RBP12.8□□□□□ -0.36
SNORA40.4-201ENST00000390971 CTHP32929 405 aa12.79□□□□□ -0.36
SNORA40.4-201ENST00000390971 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
SNORA40.4-201ENST00000390971 SPRYD7Q5W111 196 aa12.77□□□□□ -0.37
SNORA40.4-201ENST00000390971 BANK1Q8NDB2 785 aa12.77□□□□□ -0.37
SNORA40.4-201ENST00000390971 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
SNORA40.4-201ENST00000390971 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
SNORA40.4-201ENST00000390971 ZNF598Q86UK7 904 aaKnown RBP12.75□□□□□ -0.37
SNORA40.4-201ENST00000390971 TRIM32Q13049 653 aa12.74□□□□□ -0.37
SNORA40.4-201ENST00000390971 LRRN4Q8WUT4 740 aa12.74□□□□□ -0.37
SNORA40.4-201ENST00000390971 UNC93B1Q9H1C4 597 aa12.74□□□□□ -0.37
SNORA40.4-201ENST00000390971 MAP10Q9P2G4 905 aa12.73□□□□□ -0.37
SNORA40.4-201ENST00000390971 ARMC2Q8NEN0 867 aa12.71□□□□□ -0.37
SNORA40.4-201ENST00000390971 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
SNORA40.4-201ENST00000390971 WNT7BP56706 349 aa12.68□□□□□ -0.38
SNORA40.4-201ENST00000390971 NR6A1Q15406 480 aa12.67□□□□□ -0.38
SNORA40.4-201ENST00000390971 BAP1Q92560 729 aa12.67□□□□□ -0.38
SNORA40.4-201ENST00000390971 PNMA1Q8ND90 353 aa12.66□□□□□ -0.38
SNORA40.4-201ENST00000390971 SOCS7O14512 581 aa12.65□□□□□ -0.38
SNORA40.4-201ENST00000390971 HMX1Q9NP08 348 aaPredicted RBP12.65□□□□□ -0.38
SNORA40.4-201ENST00000390971 APBB1O00213 710 aa12.64□□□□□ -0.39
SNORA40.4-201ENST00000390971 SNRKQ9NRH2 765 aa12.64□□□□□ -0.39
SNORA40.4-201ENST00000390971 SH3BP2P78314 561 aa12.63□□□□□ -0.39
SNORA40.4-201ENST00000390971 LINC01559Q495D7 138 aa12.63□□□□□ -0.39
SNORA40.4-201ENST00000390971 NBPF14Q5TI25 921 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms