RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 RNF19BQ6ZMZ0 732 aa8.41□□□□□ -1.06
SNORA40.3-201ENST00000390964 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
SNORA40.3-201ENST00000390964 TUSC1Q2TAM9 212 aa8.4□□□□□ -1.06
SNORA40.3-201ENST00000390964 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
SNORA40.3-201ENST00000390964 SLC6A16Q9GZN6 736 aa8.4□□□□□ -1.06
SNORA40.3-201ENST00000390964 PCDHGC3Q9UN70 934 aa8.4□□□□□ -1.06
SNORA40.3-201ENST00000390964 PLEKHG3A1L390 1219 aa8.39□□□□□ -1.07
SNORA40.3-201ENST00000390964 MSS51Q4VC12 460 aa8.39□□□□□ -1.07
SNORA40.3-201ENST00000390964 USB1Q9BQ65 265 aaKnown RBP8.39□□□□□ -1.07
SNORA40.3-201ENST00000390964 SH3D19Q5HYK7 790 aa8.38□□□□□ -1.07
SNORA40.3-201ENST00000390964 FAM160A2Q8N612 972 aaPredicted RBP8.38□□□□□ -1.07
SNORA40.3-201ENST00000390964 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
SNORA40.3-201ENST00000390964 S1PR4O95977 384 aa8.37□□□□□ -1.07
SNORA40.3-201ENST00000390964 SKIV2LQ15477 1246 aaKnown RBP8.37□□□□□ -1.07
SNORA40.3-201ENST00000390964 PRPF38BQ5VTL8 546 aaKnown RBP8.37□□□□□ -1.07
SNORA40.3-201ENST00000390964 RETREG3Q86VR2 466 aa8.37□□□□□ -1.07
SNORA40.3-201ENST00000390964 C6orf229H3BNL8 230 aa8.36□□□□□ -1.07
SNORA40.3-201ENST00000390964 CLK2P49760 499 aaKnown RBP8.36□□□□□ -1.07
SNORA40.3-201ENST00000390964 MTMR2Q13614 643 aa8.36□□□□□ -1.07
SNORA40.3-201ENST00000390964 SYMPKQ92797 1274 aaKnown RBP8.36□□□□□ -1.07
SNORA40.3-201ENST00000390964 LIMD1Q9UGP4 676 aa8.36□□□□□ -1.07
SNORA40.3-201ENST00000390964 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
SNORA40.3-201ENST00000390964 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
SNORA40.3-201ENST00000390964 ZBTB3Q9H5J0 574 aa8.35□□□□□ -1.07
SNORA40.3-201ENST00000390964 GOPCQ9HD26 462 aa8.35□□□□□ -1.07
SNORA40.3-201ENST00000390964 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
SNORA40.3-201ENST00000390964 MMP16P51512 607 aa8.34□□□□□ -1.07
SNORA40.3-201ENST00000390964 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
SNORA40.3-201ENST00000390964 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
SNORA40.3-201ENST00000390964 HRCP23327 699 aa8.33□□□□□ -1.08
SNORA40.3-201ENST00000390964 LILRB3O75022 631 aa8.32□□□□□ -1.08
SNORA40.3-201ENST00000390964 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
SNORA40.3-201ENST00000390964 PRDM9Q9NQV7 894 aa8.32□□□□□ -1.08
SNORA40.3-201ENST00000390964 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
SNORA40.3-201ENST00000390964 JUNDP17535 347 aa8.31□□□□□ -1.08
SNORA40.3-201ENST00000390964 DESI1Q6ICB0 168 aa8.31□□□□□ -1.08
SNORA40.3-201ENST00000390964 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.31□□□□□ -1.08
SNORA40.3-201ENST00000390964 CSPP1Q1MSJ5 1256 aa8.3□□□□□ -1.08
SNORA40.3-201ENST00000390964 PRR7Q8TB68 274 aa8.3□□□□□ -1.08
SNORA40.3-201ENST00000390964 NUTM2BA6NNL0 878 aaPredicted RBP8.29□□□□□ -1.08
SNORA40.3-201ENST00000390964 NUTM2EB1AL46 878 aaPredicted RBP8.29□□□□□ -1.08
SNORA40.3-201ENST00000390964 QPCTQ16769 361 aa8.29□□□□□ -1.08
SNORA40.3-201ENST00000390964 NUTM2DQ5VT03 806 aaPredicted RBP8.29□□□□□ -1.08
SNORA40.3-201ENST00000390964 NUTM2AQ8IVF1 878 aaPredicted RBP8.29□□□□□ -1.08
SNORA40.3-201ENST00000390964 CABLES1Q8TDN4 633 aa8.29□□□□□ -1.08
SNORA40.3-201ENST00000390964 FCF1Q9Y324 198 aaKnown RBP8.29□□□□□ -1.08
SNORA40.3-201ENST00000390964 V9GY48 417 aaPredicted RBP8.29□□□□□ -1.08
SNORA40.3-201ENST00000390964 PROCA1Q8NCQ7 364 aaPredicted RBP8.28□□□□□ -1.08
SNORA40.3-201ENST00000390964 PCMTD1Q96MG8 357 aaPredicted RBP8.28□□□□□ -1.08
SNORA40.3-201ENST00000390964 PPP2R2DQ66LE6 453 aa8.27□□□□□ -1.09
SNORA40.3-201ENST00000390964 CFAP99D6REC4 459 aa8.26□□□□□ -1.09
SNORA40.3-201ENST00000390964 PTPRNQ16849 979 aa8.26□□□□□ -1.09
SNORA40.3-201ENST00000390964 RTL5Q5HYW3 569 aaPredicted RBP8.26□□□□□ -1.09
SNORA40.3-201ENST00000390964 PLA2G2CQ5R387 149 aa8.26□□□□□ -1.09
SNORA40.3-201ENST00000390964 PRKD2Q9BZL6 878 aa8.26□□□□□ -1.09
SNORA40.3-201ENST00000390964 ATP1B4Q9UN42 357 aaPredicted RBP8.26□□□□□ -1.09
SNORA40.3-201ENST00000390964 SLC19A1P41440 591 aa8.25□□□□□ -1.09
SNORA40.3-201ENST00000390964 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
SNORA40.3-201ENST00000390964 NUDT12Q9BQG2 462 aa8.25□□□□□ -1.09
SNORA40.3-201ENST00000390964 RPIAP49247 311 aa8.24□□□□□ -1.09
SNORA40.3-201ENST00000390964 Q6ZNB5 142 aa8.24□□□□□ -1.09
SNORA40.3-201ENST00000390964 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
SNORA40.3-201ENST00000390964 EMID1Q96A84 441 aaPredicted RBP8.24□□□□□ -1.09
SNORA40.3-201ENST00000390964 ZBTB24O43167 697 aaPredicted RBP8.23□□□□□ -1.09
SNORA40.3-201ENST00000390964 CCNYL3P0C7X3 344 aa8.23□□□□□ -1.09
SNORA40.3-201ENST00000390964 LIAT1Q6ZQX7 453 aa8.23□□□□□ -1.09
SNORA40.3-201ENST00000390964 CCDC24Q8N4L8 307 aa8.23□□□□□ -1.09
SNORA40.3-201ENST00000390964 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
SNORA40.3-201ENST00000390964 SPRYD7Q5W111 196 aa8.22□□□□□ -1.09
SNORA40.3-201ENST00000390964 CD2BP2O95400 341 aaKnown RBP8.21□□□□□ -1.1
SNORA40.3-201ENST00000390964 FBXO31Q5XUX0 539 aaPredicted RBP8.21□□□□□ -1.1
SNORA40.3-201ENST00000390964 ZNF598Q86UK7 904 aaKnown RBP8.21□□□□□ -1.1
SNORA40.3-201ENST00000390964 TSC1Q92574 1164 aa8.21□□□□□ -1.1
SNORA40.3-201ENST00000390964 RFC5P40937 340 aa8.2□□□□□ -1.1
SNORA40.3-201ENST00000390964 KCNH2Q12809 1159 aa8.2□□□□□ -1.1
SNORA40.3-201ENST00000390964 LAPTM4AQ15012 233 aa8.19□□□□□ -1.1
SNORA40.3-201ENST00000390964 PER1O15534 1290 aaPredicted RBP8.18□□□□□ -1.1
SNORA40.3-201ENST00000390964 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
SNORA40.3-201ENST00000390964 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
SNORA40.3-201ENST00000390964 TRIM32Q13049 653 aa8.18□□□□□ -1.1
SNORA40.3-201ENST00000390964 TMEM259Q4ZIN3 620 aa8.18□□□□□ -1.1
SNORA40.3-201ENST00000390964 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
SNORA40.3-201ENST00000390964 PTCRAQ6ISU1 281 aaPredicted RBP8.17□□□□□ -1.1
SNORA40.3-201ENST00000390964 UNC93B1Q9H1C4 597 aa8.16□□□□□ -1.1
SNORA40.3-201ENST00000390964 AP1G2O75843 785 aa8.15□□□□□ -1.1
SNORA40.3-201ENST00000390964 CTHP32929 405 aa8.15□□□□□ -1.1
SNORA40.3-201ENST00000390964 WNT7BP56706 349 aa8.14□□□□□ -1.11
SNORA40.3-201ENST00000390964 TMEM132AQ24JP5 1023 aa8.14□□□□□ -1.11
SNORA40.3-201ENST00000390964 MAP10Q9P2G4 905 aa8.14□□□□□ -1.11
SNORA40.3-201ENST00000390964 USP17L8P0C7I0 530 aa8.13□□□□□ -1.11
SNORA40.3-201ENST00000390964 PRR20EP86478 221 aa8.13□□□□□ -1.11
SNORA40.3-201ENST00000390964 PRR20CP86479 221 aa8.13□□□□□ -1.11
SNORA40.3-201ENST00000390964 PRR20DP86480 221 aa8.13□□□□□ -1.11
SNORA40.3-201ENST00000390964 PRR20BP86481 221 aa8.13□□□□□ -1.11
SNORA40.3-201ENST00000390964 PRR20AP86496 221 aa8.13□□□□□ -1.11
SNORA40.3-201ENST00000390964 GDF9O60383 454 aa8.12□□□□□ -1.11
SNORA40.3-201ENST00000390964 BANK1Q8NDB2 785 aa8.12□□□□□ -1.11
SNORA40.3-201ENST00000390964 ARMC2Q8NEN0 867 aa8.12□□□□□ -1.11
SNORA40.3-201ENST00000390964 LRRN4Q8WUT4 740 aa8.12□□□□□ -1.11
SNORA40.3-201ENST00000390964 TRIM67Q6ZTA4 783 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms