RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 JPH4Q96JJ6 628 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 KIAA1468Q9P260 1216 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 DBX1A6NMT0 343 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 J3QL48 77 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 PIK3R2O00459 728 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 PPEF1O14829 653 aaPredicted RBP0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 CAPN5O15484 640 aaPredicted RBP0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 TLL1O43897 1013 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 CHRM1P11229 460 aaPredicted RBP0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 BCRP11274 1271 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 APLP1P51693 650 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 GRIN2CQ14957 1233 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 KRTAP19-4Q3LI73 84 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 PRSS36Q5K4E3 855 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 NKAPLQ5M9Q1 402 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 PLA2G2CQ5R387 149 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 OGFOD2Q6N063 350 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 CD163Q86VB7 1156 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 GPR161Q8N6U8 529 aaKnown RBP0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 EFCAB3Q8N7B9 438 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 NANOS1Q8WY41 292 aaKnown RBP0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 ZDHHC16Q969W1 377 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 MS4A4AQ96JQ5 239 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 ZFP42Q96MM3 310 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 REPIN1Q9BWE0 567 aaKnown RBP0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 PRR14Q9BWN1 585 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 ADAM33Q9BZ11 813 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 TMPRSS5Q9H3S3 457 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 PCMTD2Q9NV79 361 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 MKL2Q9ULH7 1088 aa0.34□□□□□ -2.36
TRAJ28-201ENST00000390509 SOBPA7XYQ1 873 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 TRIM6-TRIM34B2RNG4 842 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 SOX12O15370 315 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 MAN1A2O60476 641 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 RNF40O75150 1001 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 ONECUT2O95948 504 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 ADH1BP00325 375 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 COL8A1P27658 744 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 CHRNA4P43681 627 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 GATA4P43694 442 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 PKN1Q16512 942 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 KRTAP5-2Q701N4 177 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 SAMD7Q7Z3H4 446 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 BORCS6Q96GS4 357 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 MRGPRX2Q96LB1 330 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 SLC6A16Q9GZN6 736 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 LRRC4BQ9NT99 713 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 NOP53Q9NZM5 478 aaKnown RBP0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 RAPGEFL1Q9UHV5 662 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 PCDHB3Q9Y5E6 796 aa0.33□□□□□ -2.36
TRAJ28-201ENST00000390509 SERINC4A6NH21 518 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 GNB5O14775 395 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 FCHSD2O94868 740 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 ALDH1A1P00352 501 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 OSBPP22059 807 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 KCNA4P22459 653 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 SLC4A3P48751 1232 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 HDGFP51858 240 aaKnown RBP0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 GP2P55259 537 aaKnown RBP0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 SNRPNP63162 240 aaKnown RBP0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 GSE1Q14687 1217 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 MRPL14Q6P1L8 145 aaKnown RBP0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 BLOC1S3Q6QNY0 202 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 SV2AQ7L0J3 742 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 SH3RF1Q7Z6J0 888 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 PACS2Q86VP3 889 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 FBXW7Q969H0 707 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 NAF1Q96HR8 494 aaKnown RBP0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 PURBQ96QR8 312 aaKnown RBP0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 KRTAP4-3Q9BYR4 195 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 ACSS3Q9H6R3 686 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 TPSG1Q9NRR2 321 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 RNF112Q9ULX5 631 aa0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 OAS3Q9Y6K5 1087 aaKnown RBP0.32□□□□□ -2.36
TRAJ28-201ENST00000390509 CDC14CA4D256 554 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 ZBTB24O43167 697 aaPredicted RBP0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 NR1I2O75469 434 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 KRTAP5-8O75690 187 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 H2AFB1P0C5Y9 115 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 H2AFB2P0C5Z0 115 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 ITGA6P23229 1130 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 ATXN1P54253 815 aaKnown RBP0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 NLRP6P59044 892 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 KRTAP10-9P60411 292 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 ZNF800Q2TB10 664 aaPredicted RBP eCLIP0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 TYW1BQ6NUM6 668 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 RNF19BQ6ZMZ0 732 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 TTLL10Q6ZVT0 673 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 SLF2Q8IX21 1173 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 PROM2Q8N271 834 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 VWA5B2Q8N398 1253 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 MPNDQ8N594 471 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 NTN5Q8WTR8 489 aaPredicted RBP0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 ASIC4Q96FT7 647 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 CRELD1Q96HD1 420 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 RRAGCQ9HB90 399 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 MBIPQ9NS73 344 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 PHF8Q9UPP1 1060 aa0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 FCF1Q9Y324 198 aaKnown RBP0.31□□□□□ -2.36
TRAJ28-201ENST00000390509 WASF2Q9Y6W5 498 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms