RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
TRAV20-201ENST00000390448 NPHP3Q7Z494 1330 aa13.39□□□□□ -0.27
TRAV20-201ENST00000390448 ADGRF5Q8IZF2 1346 aa13.38□□□□□ -0.27
TRAV20-201ENST00000390448 FOXO3O43524 673 aa13.37□□□□□ -0.27
TRAV20-201ENST00000390448 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
TRAV20-201ENST00000390448 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
TRAV20-201ENST00000390448 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
TRAV20-201ENST00000390448 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
TRAV20-201ENST00000390448 TMEM132EQ6IEE7 984 aa13.36□□□□□ -0.27
TRAV20-201ENST00000390448 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
TRAV20-201ENST00000390448 RGS12O14924 1447 aa13.34□□□□□ -0.27
TRAV20-201ENST00000390448 PPLO60437 1756 aa13.33□□□□□ -0.28
TRAV20-201ENST00000390448 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.28
TRAV20-201ENST00000390448 FNBP4Q8N3X1 1017 aaPredicted RBP13.33□□□□□ -0.28
TRAV20-201ENST00000390448 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
TRAV20-201ENST00000390448 PRAG1Q86YV5 1406 aa13.32□□□□□ -0.28
TRAV20-201ENST00000390448 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
TRAV20-201ENST00000390448 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
TRAV20-201ENST00000390448 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
TRAV20-201ENST00000390448 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
TRAV20-201ENST00000390448 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
TRAV20-201ENST00000390448 LAMC1P11047 1609 aa13.29□□□□□ -0.28
TRAV20-201ENST00000390448 PSME1Q06323 249 aa13.29□□□□□ -0.28
TRAV20-201ENST00000390448 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
TRAV20-201ENST00000390448 KRT28Q7Z3Y7 464 aa13.29□□□□□ -0.28
TRAV20-201ENST00000390448 SAFB2Q14151 953 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAV20-201ENST00000390448 POGKQ9P215 609 aa13.28□□□□□ -0.28
TRAV20-201ENST00000390448 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
TRAV20-201ENST00000390448 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
TRAV20-201ENST00000390448 YTHDC2Q9H6S0 1430 aaKnown RBP13.28□□□□□ -0.28
TRAV20-201ENST00000390448 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
TRAV20-201ENST00000390448 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
TRAV20-201ENST00000390448 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
TRAV20-201ENST00000390448 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
TRAV20-201ENST00000390448 C14orf93Q9H972 538 aaKnown RBP13.27□□□□□ -0.29
TRAV20-201ENST00000390448 TECPR2O15040 1411 aa13.27□□□□□ -0.29
TRAV20-201ENST00000390448 PIK3C2GO75747 1445 aa13.27□□□□□ -0.29
TRAV20-201ENST00000390448 PXDNQ92626 1479 aa13.27□□□□□ -0.29
TRAV20-201ENST00000390448 ATRNO75882 1429 aa13.26□□□□□ -0.29
TRAV20-201ENST00000390448 SPATA31A3Q5VYP0 1347 aa13.26□□□□□ -0.29
TRAV20-201ENST00000390448 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
TRAV20-201ENST00000390448 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
TRAV20-201ENST00000390448 MYOM2P54296 1465 aa13.25□□□□□ -0.29
TRAV20-201ENST00000390448 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
TRAV20-201ENST00000390448 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
TRAV20-201ENST00000390448 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
TRAV20-201ENST00000390448 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
TRAV20-201ENST00000390448 COL22A1Q8NFW1 1626 aaPredicted RBP13.24□□□□□ -0.29
TRAV20-201ENST00000390448 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
TRAV20-201ENST00000390448 CABLES1Q8TDN4 633 aa13.23□□□□□ -0.29
TRAV20-201ENST00000390448 PMFBP1Q8TBY8 1022 aa13.22□□□□□ -0.29
TRAV20-201ENST00000390448 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
TRAV20-201ENST00000390448 EP400Q96L91 3159 aa13.22□□□□□ -0.29
TRAV20-201ENST00000390448 A0A0G2JS52 829 aa13.21□□□□□ -0.29
TRAV20-201ENST00000390448 MYT1Q01538 1121 aa13.21□□□□□ -0.29
TRAV20-201ENST00000390448 SF3B2Q13435 895 aaKnown RBP13.21□□□□□ -0.29
TRAV20-201ENST00000390448 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
TRAV20-201ENST00000390448 IFT172Q9UG01 1749 aa13.2□□□□□ -0.3
TRAV20-201ENST00000390448 DCAF11Q8TEB1 546 aa13.2□□□□□ -0.3
TRAV20-201ENST00000390448 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
TRAV20-201ENST00000390448 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
TRAV20-201ENST00000390448 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
TRAV20-201ENST00000390448 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
TRAV20-201ENST00000390448 TNS3Q68CZ2 1445 aa13.19□□□□□ -0.3
TRAV20-201ENST00000390448 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
TRAV20-201ENST00000390448 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
TRAV20-201ENST00000390448 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
TRAV20-201ENST00000390448 SEPT12Q8IYM1 358 aa13.18□□□□□ -0.3
TRAV20-201ENST00000390448 GPRASP1Q5JY77 1395 aa13.18□□□□□ -0.3
TRAV20-201ENST00000390448 RALGAPBQ86X10 1494 aa13.17□□□□□ -0.3
TRAV20-201ENST00000390448 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
TRAV20-201ENST00000390448 VPS72Q15906 364 aa13.17□□□□□ -0.3
TRAV20-201ENST00000390448 SBNO1A3KN83 1393 aa13.17□□□□□ -0.3
TRAV20-201ENST00000390448 NGDNQ8NEJ9 315 aaKnown RBP13.16□□□□□ -0.3
TRAV20-201ENST00000390448 SLIT2O94813 1529 aa13.16□□□□□ -0.3
TRAV20-201ENST00000390448 EIF3AQ14152 1382 aaKnown RBP13.16□□□□□ -0.3
TRAV20-201ENST00000390448 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
TRAV20-201ENST00000390448 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
TRAV20-201ENST00000390448 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
TRAV20-201ENST00000390448 ANKARQ7Z5J8 1434 aa13.14□□□□□ -0.31
TRAV20-201ENST00000390448 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
TRAV20-201ENST00000390448 STAC3Q96MF2 364 aa13.14□□□□□ -0.31
TRAV20-201ENST00000390448 BLMP54132 1417 aaPredicted RBP13.13□□□□□ -0.31
TRAV20-201ENST00000390448 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
TRAV20-201ENST00000390448 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
TRAV20-201ENST00000390448 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
TRAV20-201ENST00000390448 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
TRAV20-201ENST00000390448 DEFB132Q7Z7B7 95 aa13.12□□□□□ -0.31
TRAV20-201ENST00000390448 DLC1Q96QB1 1528 aa13.12□□□□□ -0.31
TRAV20-201ENST00000390448 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.11□□□□□ -0.31
TRAV20-201ENST00000390448 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
TRAV20-201ENST00000390448 GLI3P10071 1580 aa13.11□□□□□ -0.31
TRAV20-201ENST00000390448 ONECUT3O60422 494 aaPredicted RBP13.1□□□□□ -0.31
TRAV20-201ENST00000390448 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
TRAV20-201ENST00000390448 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
TRAV20-201ENST00000390448 HRCP23327 699 aa13.08□□□□□ -0.32
TRAV20-201ENST00000390448 BAG6P46379 1132 aa13.08□□□□□ -0.32
TRAV20-201ENST00000390448 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
TRAV20-201ENST00000390448 ADGRB1O14514 1584 aa13.07□□□□□ -0.32
TRAV20-201ENST00000390448 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms