RNA–Protein interactions for RNA: ENST00000390443.3

TRAV8-6-201, Transcript of T cell receptor alpha variable 8-6, humanhuman

APPRIS P1 BASIC

Gene TRAV8-6, Length 561 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6-201ENST00000390443 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
TRAV8-6-201ENST00000390443 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
TRAV8-6-201ENST00000390443 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
TRAV8-6-201ENST00000390443 FOXO3O43524 673 aa13.87□□□□□ -0.19
TRAV8-6-201ENST00000390443 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
TRAV8-6-201ENST00000390443 STK26Q9P289 416 aa13.87□□□□□ -0.19
TRAV8-6-201ENST00000390443 RRBP1Q9P2E9 1410 aaKnown RBP13.87□□□□□ -0.19
TRAV8-6-201ENST00000390443 PRAG1Q86YV5 1406 aa13.86□□□□□ -0.19
TRAV8-6-201ENST00000390443 ATRNO75882 1429 aa13.85□□□□□ -0.19
TRAV8-6-201ENST00000390443 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
TRAV8-6-201ENST00000390443 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
TRAV8-6-201ENST00000390443 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
TRAV8-6-201ENST00000390443 ADGRF5Q8IZF2 1346 aa13.84□□□□□ -0.19
TRAV8-6-201ENST00000390443 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.19
TRAV8-6-201ENST00000390443 LAMC1P11047 1609 aa13.83□□□□□ -0.2
TRAV8-6-201ENST00000390443 MYOM2P54296 1465 aa13.83□□□□□ -0.2
TRAV8-6-201ENST00000390443 KIF1BO60333 1816 aa13.83□□□□□ -0.2
TRAV8-6-201ENST00000390443 BCL9LQ86UU0 1499 aa13.82□□□□□ -0.2
TRAV8-6-201ENST00000390443 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
TRAV8-6-201ENST00000390443 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
TRAV8-6-201ENST00000390443 PXDNQ92626 1479 aa13.81□□□□□ -0.2
TRAV8-6-201ENST00000390443 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
TRAV8-6-201ENST00000390443 EP400Q96L91 3159 aa13.8□□□□□ -0.2
TRAV8-6-201ENST00000390443 PLEKHH1Q9ULM0 1364 aa13.8□□□□□ -0.2
TRAV8-6-201ENST00000390443 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
TRAV8-6-201ENST00000390443 CDC42BPGQ6DT37 1551 aa13.79□□□□□ -0.2
TRAV8-6-201ENST00000390443 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
TRAV8-6-201ENST00000390443 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
TRAV8-6-201ENST00000390443 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
TRAV8-6-201ENST00000390443 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
TRAV8-6-201ENST00000390443 TECPR2O15040 1411 aa13.77□□□□□ -0.21
TRAV8-6-201ENST00000390443 SPATA31A3Q5VYP0 1347 aa13.77□□□□□ -0.21
TRAV8-6-201ENST00000390443 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
TRAV8-6-201ENST00000390443 ABCC11Q96J66 1382 aa13.77□□□□□ -0.21
TRAV8-6-201ENST00000390443 ANKRD30BQ9BXX2 1392 aa13.77□□□□□ -0.21
TRAV8-6-201ENST00000390443 ADRA2BP18089 450 aa13.76□□□□□ -0.21
TRAV8-6-201ENST00000390443 SPATA31E1Q6ZUB1 1445 aa13.75□□□□□ -0.21
TRAV8-6-201ENST00000390443 MPHOSPH9Q99550 1183 aa13.75□□□□□ -0.21
TRAV8-6-201ENST00000390443 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
TRAV8-6-201ENST00000390443 PPLO60437 1756 aa13.74□□□□□ -0.21
TRAV8-6-201ENST00000390443 LMOD2Q6P5Q4 547 aa13.74□□□□□ -0.21
TRAV8-6-201ENST00000390443 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
TRAV8-6-201ENST00000390443 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
TRAV8-6-201ENST00000390443 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
TRAV8-6-201ENST00000390443 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
TRAV8-6-201ENST00000390443 PSME1Q06323 249 aa13.73□□□□□ -0.21
TRAV8-6-201ENST00000390443 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
TRAV8-6-201ENST00000390443 SLIT2O94813 1529 aa13.73□□□□□ -0.21
TRAV8-6-201ENST00000390443 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
TRAV8-6-201ENST00000390443 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
TRAV8-6-201ENST00000390443 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAV8-6-201ENST00000390443 DEFB132Q7Z7B7 95 aa13.72□□□□□ -0.21
TRAV8-6-201ENST00000390443 BLMP54132 1417 aaPredicted RBP13.72□□□□□ -0.21
TRAV8-6-201ENST00000390443 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
TRAV8-6-201ENST00000390443 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.21
TRAV8-6-201ENST00000390443 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.22
TRAV8-6-201ENST00000390443 VPS72Q15906 364 aa13.7□□□□□ -0.22
TRAV8-6-201ENST00000390443 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
TRAV8-6-201ENST00000390443 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
TRAV8-6-201ENST00000390443 A0A0G2JS52 829 aa13.69□□□□□ -0.22
TRAV8-6-201ENST00000390443 MYT1Q01538 1121 aa13.69□□□□□ -0.22
TRAV8-6-201ENST00000390443 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
TRAV8-6-201ENST00000390443 GLI3P10071 1580 aa13.68□□□□□ -0.22
TRAV8-6-201ENST00000390443 KRT27Q7Z3Y8 459 aa13.68□□□□□ -0.22
TRAV8-6-201ENST00000390443 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
TRAV8-6-201ENST00000390443 POGKQ9P215 609 aa13.68□□□□□ -0.22
TRAV8-6-201ENST00000390443 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
TRAV8-6-201ENST00000390443 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
TRAV8-6-201ENST00000390443 ARHGEF10O15013 1369 aa13.67□□□□□ -0.22
TRAV8-6-201ENST00000390443 USP32Q8NFA0 1604 aa13.66□□□□□ -0.22
TRAV8-6-201ENST00000390443 ONECUT3O60422 494 aaPredicted RBP13.66□□□□□ -0.22
TRAV8-6-201ENST00000390443 KIF1AQ12756 1690 aa13.66□□□□□ -0.22
TRAV8-6-201ENST00000390443 FMN2Q9NZ56 1722 aa13.65□□□□□ -0.22
TRAV8-6-201ENST00000390443 NRXN1Q9ULB1 1477 aa13.65□□□□□ -0.22
TRAV8-6-201ENST00000390443 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
TRAV8-6-201ENST00000390443 FAM98CQ17RN3 349 aaKnown RBP13.64□□□□□ -0.23
TRAV8-6-201ENST00000390443 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
TRAV8-6-201ENST00000390443 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
TRAV8-6-201ENST00000390443 KNDC1Q76NI1 1749 aa13.64□□□□□ -0.23
TRAV8-6-201ENST00000390443 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.64□□□□□ -0.23
TRAV8-6-201ENST00000390443 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
TRAV8-6-201ENST00000390443 BAG6P46379 1132 aa13.62□□□□□ -0.23
TRAV8-6-201ENST00000390443 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
TRAV8-6-201ENST00000390443 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
TRAV8-6-201ENST00000390443 GPRASP1Q5JY77 1395 aa13.61□□□□□ -0.23
TRAV8-6-201ENST00000390443 ANKARQ7Z5J8 1434 aa13.61□□□□□ -0.23
TRAV8-6-201ENST00000390443 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
TRAV8-6-201ENST00000390443 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
TRAV8-6-201ENST00000390443 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
TRAV8-6-201ENST00000390443 FAM182BQ5T319 152 aa13.59□□□□□ -0.23
TRAV8-6-201ENST00000390443 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
TRAV8-6-201ENST00000390443 EN1Q05925 392 aaPredicted RBP13.58□□□□□ -0.24
TRAV8-6-201ENST00000390443 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
TRAV8-6-201ENST00000390443 PRR36Q9H6K5 1346 aa13.58□□□□□ -0.24
TRAV8-6-201ENST00000390443 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
TRAV8-6-201ENST00000390443 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
TRAV8-6-201ENST00000390443 DLC1Q96QB1 1528 aa13.57□□□□□ -0.24
TRAV8-6-201ENST00000390443 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
TRAV8-6-201ENST00000390443 HRCP23327 699 aa13.56□□□□□ -0.24
TRAV8-6-201ENST00000390443 SPATA31A5Q5VU36 1347 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms