RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 SOS2Q07890 1332 aaPredicted RBP16.52■□□□□ 0.24
TRAV3-201ENST00000390425 CDK12Q9NYV4 1490 aaPredicted RBP16.52■□□□□ 0.23
TRAV3-201ENST00000390425 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
TRAV3-201ENST00000390425 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
TRAV3-201ENST00000390425 RGPD8O14715 1765 aaPredicted RBP16.51■□□□□ 0.23
TRAV3-201ENST00000390425 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
TRAV3-201ENST00000390425 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
TRAV3-201ENST00000390425 PLEKHH1Q9ULM0 1364 aa16.5■□□□□ 0.23
TRAV3-201ENST00000390425 PXDNQ92626 1479 aa16.49■□□□□ 0.23
TRAV3-201ENST00000390425 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
TRAV3-201ENST00000390425 MYOM2P54296 1465 aa16.48■□□□□ 0.23
TRAV3-201ENST00000390425 RGS12O14924 1447 aa16.47■□□□□ 0.23
TRAV3-201ENST00000390425 YTHDC2Q9H6S0 1430 aaKnown RBP16.47■□□□□ 0.23
TRAV3-201ENST00000390425 TMEM132EQ6IEE7 984 aa16.47■□□□□ 0.23
TRAV3-201ENST00000390425 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
TRAV3-201ENST00000390425 WAPLQ7Z5K2 1190 aa16.46■□□□□ 0.23
TRAV3-201ENST00000390425 C8orf37Q96NL8 207 aa16.46■□□□□ 0.23
TRAV3-201ENST00000390425 STK26Q9P289 416 aa16.46■□□□□ 0.23
TRAV3-201ENST00000390425 RXRBP28702 533 aa16.45■□□□□ 0.22
TRAV3-201ENST00000390425 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
TRAV3-201ENST00000390425 ADAMTS2O95450 1211 aa16.44■□□□□ 0.22
TRAV3-201ENST00000390425 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAV3-201ENST00000390425 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
TRAV3-201ENST00000390425 NPHP3Q7Z494 1330 aa16.42■□□□□ 0.22
TRAV3-201ENST00000390425 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
TRAV3-201ENST00000390425 C14orf93Q9H972 538 aaKnown RBP16.41■□□□□ 0.22
TRAV3-201ENST00000390425 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
TRAV3-201ENST00000390425 ABCA3Q99758 1704 aa16.4■□□□□ 0.22
TRAV3-201ENST00000390425 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.4■□□□□ 0.22
TRAV3-201ENST00000390425 NUTM2FA1L443 756 aa16.4■□□□□ 0.22
TRAV3-201ENST00000390425 XPCQ01831 940 aaPredicted RBP16.4■□□□□ 0.22
TRAV3-201ENST00000390425 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
TRAV3-201ENST00000390425 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
TRAV3-201ENST00000390425 ADGRB2O60241 1585 aa16.39■□□□□ 0.21
TRAV3-201ENST00000390425 FOXO3O43524 673 aa16.39■□□□□ 0.21
TRAV3-201ENST00000390425 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
TRAV3-201ENST00000390425 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
TRAV3-201ENST00000390425 NGLY1Q96IV0 654 aa16.39■□□□□ 0.21
TRAV3-201ENST00000390425 QTRT2Q9H974 415 aaKnown RBP16.39■□□□□ 0.21
TRAV3-201ENST00000390425 ATRNO75882 1429 aa16.38■□□□□ 0.21
TRAV3-201ENST00000390425 FNBP4Q8N3X1 1017 aaPredicted RBP16.37■□□□□ 0.21
TRAV3-201ENST00000390425 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
TRAV3-201ENST00000390425 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
TRAV3-201ENST00000390425 USP21Q9UK80 565 aa16.35■□□□□ 0.21
TRAV3-201ENST00000390425 EP400Q96L91 3159 aa16.35■□□□□ 0.21
TRAV3-201ENST00000390425 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
TRAV3-201ENST00000390425 ARHGEF28Q8N1W1 1705 aaKnown RBP16.33■□□□□ 0.21
TRAV3-201ENST00000390425 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.21
TRAV3-201ENST00000390425 SPATA31A3Q5VYP0 1347 aa16.33■□□□□ 0.2
TRAV3-201ENST00000390425 PLCH1Q4KWH8 1693 aa16.33■□□□□ 0.2
TRAV3-201ENST00000390425 GLI3P10071 1580 aa16.32■□□□□ 0.2
TRAV3-201ENST00000390425 TNS3Q68CZ2 1445 aa16.32■□□□□ 0.2
TRAV3-201ENST00000390425 PRAM1Q96QH2 718 aa16.32■□□□□ 0.2
TRAV3-201ENST00000390425 TRPC5Q9UL62 973 aaPredicted RBP16.32■□□□□ 0.2
TRAV3-201ENST00000390425 SLIT2O94813 1529 aa16.31■□□□□ 0.2
TRAV3-201ENST00000390425 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
TRAV3-201ENST00000390425 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
TRAV3-201ENST00000390425 ANKARQ7Z5J8 1434 aa16.3■□□□□ 0.2
TRAV3-201ENST00000390425 SAFB2Q14151 953 aaKnown RBP eCLIP16.3■□□□□ 0.2
TRAV3-201ENST00000390425 NWD2Q9ULI1 1742 aa16.3■□□□□ 0.2
TRAV3-201ENST00000390425 CRYBG1Q9Y4K1 1723 aa16.29■□□□□ 0.2
TRAV3-201ENST00000390425 PHF8Q9UPP1 1060 aa16.29■□□□□ 0.2
TRAV3-201ENST00000390425 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
TRAV3-201ENST00000390425 NRAPQ86VF7 1730 aa16.28■□□□□ 0.2
TRAV3-201ENST00000390425 ATAD2Q6PL18 1390 aa16.27■□□□□ 0.2
TRAV3-201ENST00000390425 TULP4Q9NRJ4 1543 aa16.27■□□□□ 0.2
TRAV3-201ENST00000390425 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
TRAV3-201ENST00000390425 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
TRAV3-201ENST00000390425 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
TRAV3-201ENST00000390425 PRR36Q9H6K5 1346 aa16.25■□□□□ 0.19
TRAV3-201ENST00000390425 RALGAPBQ86X10 1494 aa16.25■□□□□ 0.19
TRAV3-201ENST00000390425 HRCP23327 699 aa16.24■□□□□ 0.19
TRAV3-201ENST00000390425 POGKQ9P215 609 aa16.24■□□□□ 0.19
TRAV3-201ENST00000390425 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
TRAV3-201ENST00000390425 CABLES1Q8TDN4 633 aa16.23■□□□□ 0.19
TRAV3-201ENST00000390425 DCAF11Q8TEB1 546 aa16.23■□□□□ 0.19
TRAV3-201ENST00000390425 GJD4Q96KN9 370 aaPredicted RBP16.23■□□□□ 0.19
TRAV3-201ENST00000390425 HIRIP3Q9BW71 556 aaPredicted RBP16.23■□□□□ 0.19
TRAV3-201ENST00000390425 KDM2AQ9Y2K7 1162 aa16.23■□□□□ 0.19
TRAV3-201ENST00000390425 TOPAZ1Q8N9V7 1692 aa16.23■□□□□ 0.19
TRAV3-201ENST00000390425 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
TRAV3-201ENST00000390425 UNC5CLQ8IV45 518 aa16.22■□□□□ 0.19
TRAV3-201ENST00000390425 PMFBP1Q8TBY8 1022 aa16.22■□□□□ 0.19
TRAV3-201ENST00000390425 ARHGEF10O15013 1369 aa16.22■□□□□ 0.19
TRAV3-201ENST00000390425 ATP7BP35670 1465 aa16.22■□□□□ 0.19
TRAV3-201ENST00000390425 PSME1Q06323 249 aa16.2■□□□□ 0.18
TRAV3-201ENST00000390425 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
TRAV3-201ENST00000390425 COL14A1Q05707 1796 aaKnown RBP16.19■□□□□ 0.18
TRAV3-201ENST00000390425 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
TRAV3-201ENST00000390425 WASLO00401 505 aaPredicted RBP16.18■□□□□ 0.18
TRAV3-201ENST00000390425 PLEKHG5O94827 1062 aa16.18■□□□□ 0.18
TRAV3-201ENST00000390425 STAC3Q96MF2 364 aa16.18■□□□□ 0.18
TRAV3-201ENST00000390425 SRCAPQ6ZRS2 3230 aa16.18■□□□□ 0.18
TRAV3-201ENST00000390425 LMOD2Q6P5Q4 547 aa16.17■□□□□ 0.18
TRAV3-201ENST00000390425 HAP1P54257 671 aaPredicted RBP16.16■□□□□ 0.18
TRAV3-201ENST00000390425 VPS72Q15906 364 aa16.15■□□□□ 0.18
TRAV3-201ENST00000390425 GPRASP1Q5JY77 1395 aa16.14■□□□□ 0.17
TRAV3-201ENST00000390425 FAM83GA6ND36 823 aa16.13■□□□□ 0.17
TRAV3-201ENST00000390425 QRICH2Q9H0J4 1663 aa16.12■□□□□ 0.17
TRAV3-201ENST00000390425 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms