RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
TRBV28-201ENST00000390400 ARHGEF5Q12774 1597 aa10.88□□□□□ -0.67
TRBV28-201ENST00000390400 DDRGK1Q96HY6 314 aa10.88□□□□□ -0.67
TRBV28-201ENST00000390400 TMUB1Q9BVT8 246 aa10.88□□□□□ -0.67
TRBV28-201ENST00000390400 ARHGEF12Q9NZN5 1544 aa10.88□□□□□ -0.67
TRBV28-201ENST00000390400 DNMT1P26358 1616 aaKnown RBP10.87□□□□□ -0.67
TRBV28-201ENST00000390400 MBD5Q9P267 1494 aa10.87□□□□□ -0.67
TRBV28-201ENST00000390400 HNRNPMP52272 730 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRBV28-201ENST00000390400 TSR1Q2NL82 804 aaKnown RBP10.87□□□□□ -0.67
TRBV28-201ENST00000390400 GIGYF2Q6Y7W6 1299 aaKnown RBP10.87□□□□□ -0.67
TRBV28-201ENST00000390400 C1orf115Q9H7X2 142 aa10.87□□□□□ -0.67
TRBV28-201ENST00000390400 DENND4BO75064 1496 aaPredicted RBP10.87□□□□□ -0.67
TRBV28-201ENST00000390400 CCDC141Q6ZP82 1450 aa10.87□□□□□ -0.67
TRBV28-201ENST00000390400 POGZQ7Z3K3 1410 aa10.86□□□□□ -0.67
TRBV28-201ENST00000390400 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
TRBV28-201ENST00000390400 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
TRBV28-201ENST00000390400 DAXXQ9UER7 740 aaPredicted RBP10.86□□□□□ -0.67
TRBV28-201ENST00000390400 PCDHGA10Q9Y5H3 936 aa10.86□□□□□ -0.67
TRBV28-201ENST00000390400 DAPK1P53355 1430 aa10.85□□□□□ -0.67
TRBV28-201ENST00000390400 TRAPPC8Q9Y2L5 1435 aa10.85□□□□□ -0.67
TRBV28-201ENST00000390400 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
TRBV28-201ENST00000390400 SLC34A2O95436 690 aa10.85□□□□□ -0.67
TRBV28-201ENST00000390400 TTLL12Q14166 644 aaPredicted RBP10.85□□□□□ -0.67
TRBV28-201ENST00000390400 ZNF518AQ6AHZ1 1483 aa10.85□□□□□ -0.67
TRBV28-201ENST00000390400 CROCC2H7BZ55 1655 aa10.85□□□□□ -0.67
TRBV28-201ENST00000390400 ABCC5O15440 1437 aa10.84□□□□□ -0.67
TRBV28-201ENST00000390400 RICTORQ6R327 1708 aa10.84□□□□□ -0.67
TRBV28-201ENST00000390400 ITGAEP38570 1179 aa10.84□□□□□ -0.67
TRBV28-201ENST00000390400 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
TRBV28-201ENST00000390400 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
TRBV28-201ENST00000390400 SHANK2Q9UPX8 1470 aa10.84□□□□□ -0.67
TRBV28-201ENST00000390400 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 TSPY4P0CV99 314 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 TSPY10P0CW01 314 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 AFAP1Q8N556 730 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 SLC39A7Q92504 469 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 DCBLD2Q96PD2 775 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 KDM6BO15054 1643 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 C9orf84Q5VXU9 1444 aa10.83□□□□□ -0.68
TRBV28-201ENST00000390400 SPAG9O60271 1321 aaKnown RBP10.83□□□□□ -0.68
TRBV28-201ENST00000390400 KDM5CP41229 1560 aa10.82□□□□□ -0.68
TRBV28-201ENST00000390400 FRMPD1Q5SYB0 1578 aa10.82□□□□□ -0.68
TRBV28-201ENST00000390400 PHF14O94880 888 aa10.82□□□□□ -0.68
TRBV28-201ENST00000390400 RAPGEF3O95398 923 aa10.82□□□□□ -0.68
TRBV28-201ENST00000390400 NLRP7Q8WX94 980 aa10.82□□□□□ -0.68
TRBV28-201ENST00000390400 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
TRBV28-201ENST00000390400 COL17A1Q9UMD9 1497 aaPredicted RBP10.81□□□□□ -0.68
TRBV28-201ENST00000390400 ADGBQ8N7X0 1667 aa10.81□□□□□ -0.68
TRBV28-201ENST00000390400 PTPRKQ15262 1439 aa10.81□□□□□ -0.68
TRBV28-201ENST00000390400 HECW2Q9P2P5 1572 aa10.81□□□□□ -0.68
TRBV28-201ENST00000390400 MAST1Q9Y2H9 1570 aa10.81□□□□□ -0.68
TRBV28-201ENST00000390400 ATP7AQ04656 1500 aa10.8□□□□□ -0.68
TRBV28-201ENST00000390400 ZMYM4Q5VZL5 1548 aa10.8□□□□□ -0.68
TRBV28-201ENST00000390400 C7P10643 843 aa10.8□□□□□ -0.68
TRBV28-201ENST00000390400 NEUROD1Q13562 356 aa10.8□□□□□ -0.68
TRBV28-201ENST00000390400 CHIC2Q9UKJ5 165 aa10.8□□□□□ -0.68
TRBV28-201ENST00000390400 MYT1LQ9UL68 1186 aa10.8□□□□□ -0.68
TRBV28-201ENST00000390400 INO80Q9ULG1 1556 aaPredicted RBP10.8□□□□□ -0.68
TRBV28-201ENST00000390400 ZFYVE16Q7Z3T8 1539 aa10.79□□□□□ -0.68
TRBV28-201ENST00000390400 ANKRD30AQ9BXX3 1397 aa10.79□□□□□ -0.68
TRBV28-201ENST00000390400 RTEL1-TNFRSF6BF6WH68 1400 aa10.79□□□□□ -0.68
TRBV28-201ENST00000390400 MAP3K7O43318 606 aa10.79□□□□□ -0.68
TRBV28-201ENST00000390400 PCDHGA4Q9Y5G9 962 aa10.79□□□□□ -0.68
TRBV28-201ENST00000390400 ADGRL2O95490 1459 aa10.79□□□□□ -0.68
TRBV28-201ENST00000390400 MLH3Q9UHC1 1453 aa10.79□□□□□ -0.68
TRBV28-201ENST00000390400 ROCK1Q13464 1354 aa10.78□□□□□ -0.68
TRBV28-201ENST00000390400 PLXNC1O60486 1568 aa10.78□□□□□ -0.68
TRBV28-201ENST00000390400 MDM2Q00987 491 aaPredicted RBP10.78□□□□□ -0.68
TRBV28-201ENST00000390400 EPAS1Q99814 870 aa10.78□□□□□ -0.68
TRBV28-201ENST00000390400 GOPCQ9HD26 462 aa10.78□□□□□ -0.68
TRBV28-201ENST00000390400 MAGI2Q86UL8 1455 aa10.78□□□□□ -0.68
TRBV28-201ENST00000390400 KIDINS220Q9ULH0 1771 aa10.77□□□□□ -0.68
TRBV28-201ENST00000390400 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
TRBV28-201ENST00000390400 ARHGEF40Q8TER5 1519 aa10.76□□□□□ -0.69
TRBV28-201ENST00000390400 DIEXFQ68CQ4 756 aaKnown RBP10.76□□□□□ -0.69
TRBV28-201ENST00000390400 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
TRBV28-201ENST00000390400 KIF15Q9NS87 1388 aa10.76□□□□□ -0.69
TRBV28-201ENST00000390400 NCOA1Q15788 1441 aa10.75□□□□□ -0.69
TRBV28-201ENST00000390400 RRP7BPQ9NSQ0 103 aa10.75□□□□□ -0.69
TRBV28-201ENST00000390400 ABCA6Q8N139 1617 aa10.75□□□□□ -0.69
TRBV28-201ENST00000390400 HFM1A2PYH4 1435 aa10.75□□□□□ -0.69
TRBV28-201ENST00000390400 DIP2CQ9Y2E4 1556 aa10.74□□□□□ -0.69
TRBV28-201ENST00000390400 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
TRBV28-201ENST00000390400 TYW1BQ6NUM6 668 aa10.74□□□□□ -0.69
TRBV28-201ENST00000390400 KHSRPQ92945 711 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRBV28-201ENST00000390400 YEATS2Q9ULM3 1422 aa10.74□□□□□ -0.69
TRBV28-201ENST00000390400 DUOX2Q9NRD8 1548 aa10.74□□□□□ -0.69
TRBV28-201ENST00000390400 SSTR3P32745 418 aaPredicted RBP10.73□□□□□ -0.69
TRBV28-201ENST00000390400 PROCA1Q8NCQ7 364 aaPredicted RBP10.73□□□□□ -0.69
TRBV28-201ENST00000390400 SH3D19Q5HYK7 790 aa10.72□□□□□ -0.69
TRBV28-201ENST00000390400 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
TRBV28-201ENST00000390400 GPCPD1Q9NPB8 672 aa10.72□□□□□ -0.69
TRBV28-201ENST00000390400 NAIPQ13075 1403 aa10.72□□□□□ -0.69
TRBV28-201ENST00000390400 ATP10AO60312 1499 aa10.72□□□□□ -0.69
TRBV28-201ENST00000390400 A2MP01023 1474 aa10.72□□□□□ -0.69
TRBV28-201ENST00000390400 FOSBP53539 338 aa10.71□□□□□ -0.69
TRBV28-201ENST00000390400 FBXO31Q5XUX0 539 aaPredicted RBP10.71□□□□□ -0.69
TRBV28-201ENST00000390400 PADI6Q6TGC4 694 aa10.71□□□□□ -0.69
TRBV28-201ENST00000390400 SETD5Q9C0A6 1442 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms