RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 UQCRHP07919 91 aa10.48□□□□□ -0.73
PKP4-202ENST00000389759 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
PKP4-202ENST00000389759 KIAA1107Q9UPP5 1409 aa10.47□□□□□ -0.73
PKP4-202ENST00000389759 LETM1O95202 739 aaPredicted RBP10.47□□□□□ -0.73
PKP4-202ENST00000389759 C20orf194Q5TEA3 1177 aa10.47□□□□□ -0.73
PKP4-202ENST00000389759 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
PKP4-202ENST00000389759 MVPQ14764 893 aaKnown RBP10.47□□□□□ -0.73
PKP4-202ENST00000389759 NAIPQ13075 1403 aa10.47□□□□□ -0.73
PKP4-202ENST00000389759 SLFN5Q08AF3 891 aa10.47□□□□□ -0.73
PKP4-202ENST00000389759 FKBP5Q13451 457 aaPredicted RBP10.47□□□□□ -0.73
PKP4-202ENST00000389759 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.47□□□□□ -0.73
PKP4-202ENST00000389759 CCDC66A2RUB6 948 aa10.47□□□□□ -0.73
PKP4-202ENST00000389759 MNS1Q8NEH6 495 aa10.47□□□□□ -0.73
PKP4-202ENST00000389759 UBE2Q2Q8WVN8 375 aa10.47□□□□□ -0.73
PKP4-202ENST00000389759 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.47□□□□□ -0.73
PKP4-202ENST00000389759 CCDC73Q6ZRK6 1079 aa10.46□□□□□ -0.73
PKP4-202ENST00000389759 GGNBP2Q9H3C7 697 aa10.46□□□□□ -0.73
PKP4-202ENST00000389759 TIAM1Q13009 1591 aa10.46□□□□□ -0.73
PKP4-202ENST00000389759 NGDNQ8NEJ9 315 aaKnown RBP10.46□□□□□ -0.74
PKP4-202ENST00000389759 TRIM5Q9C035 493 aa10.46□□□□□ -0.74
PKP4-202ENST00000389759 TPM1P09493 284 aa10.46□□□□□ -0.74
PKP4-202ENST00000389759 ATF7IPQ6VMQ6 1270 aa10.46□□□□□ -0.74
PKP4-202ENST00000389759 WDR63Q8IWG1 891 aa10.46□□□□□ -0.74
PKP4-202ENST00000389759 IFIT2P09913 472 aaKnown RBP10.45□□□□□ -0.74
PKP4-202ENST00000389759 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
PKP4-202ENST00000389759 RASSF8Q8NHQ8 419 aa10.45□□□□□ -0.74
PKP4-202ENST00000389759 LTV1Q96GA3 475 aaPredicted RBP10.45□□□□□ -0.74
PKP4-202ENST00000389759 TSR2Q969E8 191 aaKnown RBP10.45□□□□□ -0.74
PKP4-202ENST00000389759 SETQ01105 290 aaPredicted RBP10.45□□□□□ -0.74
PKP4-202ENST00000389759 TAF7LQ5H9L4 462 aa10.45□□□□□ -0.74
PKP4-202ENST00000389759 HMOX1P09601 288 aa10.44□□□□□ -0.74
PKP4-202ENST00000389759 TPD52L1Q16890 204 aaPredicted RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 TSR1Q2NL82 804 aaKnown RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 CPLX2Q6PUV4 134 aaKnown RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 NOB1Q9ULX3 412 aaKnown RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 ZNF330Q9Y3S2 320 aaPredicted RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 NUTM2FA1L443 756 aa10.44□□□□□ -0.74
PKP4-202ENST00000389759 FIBPO43427 364 aa10.44□□□□□ -0.74
PKP4-202ENST00000389759 MPNDQ8N594 471 aa10.44□□□□□ -0.74
PKP4-202ENST00000389759 TBC1D2Q9BYX2 928 aa10.44□□□□□ -0.74
PKP4-202ENST00000389759 PES1O00541 588 aaKnown RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
PKP4-202ENST00000389759 C9orf78Q9NZ63 289 aaPredicted RBP10.44□□□□□ -0.74
PKP4-202ENST00000389759 GAPVD1Q14C86 1478 aa10.44□□□□□ -0.74
PKP4-202ENST00000389759 RAD54L2Q9Y4B4 1467 aa10.44□□□□□ -0.74
PKP4-202ENST00000389759 NPHP1O15259 732 aa10.43□□□□□ -0.74
PKP4-202ENST00000389759 CHD1LQ86WJ1 897 aa10.43□□□□□ -0.74
PKP4-202ENST00000389759 CCDC27Q2M243 656 aa10.43□□□□□ -0.74
PKP4-202ENST00000389759 HSP90AB4PQ58FF6 505 aa10.43□□□□□ -0.74
PKP4-202ENST00000389759 PDCL3Q9H2J4 239 aa10.43□□□□□ -0.74
PKP4-202ENST00000389759 TOMM22Q9NS69 142 aa10.43□□□□□ -0.74
PKP4-202ENST00000389759 NCOA1Q15788 1441 aa10.43□□□□□ -0.74
PKP4-202ENST00000389759 ERC2O15083 957 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 CFAP70Q5T0N1 1121 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 PTPRGP23470 1445 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 NECTIN2Q92692 538 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 CPLX1O14810 134 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 CCDC70Q6NSX1 233 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 EIF2S2P20042 333 aaKnown RBP10.42□□□□□ -0.74
PKP4-202ENST00000389759 PDCP20941 246 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 TEFQ10587 303 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 SPC24Q8NBT2 197 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 SDF4Q9BRK5 362 aa10.42□□□□□ -0.74
PKP4-202ENST00000389759 FBXW7Q969H0 707 aa10.41□□□□□ -0.74
PKP4-202ENST00000389759 WDR33Q9C0J8 1336 aaKnown RBP10.41□□□□□ -0.74
PKP4-202ENST00000389759 WWC1Q8IX03 1113 aa10.41□□□□□ -0.74
PKP4-202ENST00000389759 NAT10Q9H0A0 1025 aaKnown RBP10.41□□□□□ -0.74
PKP4-202ENST00000389759 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
PKP4-202ENST00000389759 SCAPERQ9BY12 1400 aa10.41□□□□□ -0.74
PKP4-202ENST00000389759 IPO7O95373 1038 aaKnown RBP10.41□□□□□ -0.74
PKP4-202ENST00000389759 CSB-PGBD3P0DP91 1061 aa10.41□□□□□ -0.74
PKP4-202ENST00000389759 TSPYL4Q9UJ04 414 aa10.41□□□□□ -0.74
PKP4-202ENST00000389759 HSP90B2PQ58FF3 399 aa10.4□□□□□ -0.74
PKP4-202ENST00000389759 CCDC192P0DO97 292 aa10.4□□□□□ -0.74
PKP4-202ENST00000389759 TWISTNBQ3B726 338 aaPredicted RBP10.4□□□□□ -0.74
PKP4-202ENST00000389759 CCDC112Q8NEF3 446 aa10.4□□□□□ -0.74
PKP4-202ENST00000389759 GNAI3P08754 354 aa10.4□□□□□ -0.74
PKP4-202ENST00000389759 PODXL2Q9NZ53 605 aa10.4□□□□□ -0.74
PKP4-202ENST00000389759 ERBINQ96RT1 1412 aa10.4□□□□□ -0.75
PKP4-202ENST00000389759 PRKAR2BP31323 418 aa10.4□□□□□ -0.75
PKP4-202ENST00000389759 G3BP1Q13283 466 aaKnown RBP eCLIP10.4□□□□□ -0.75
PKP4-202ENST00000389759 NOM1Q5C9Z4 860 aaKnown RBP10.4□□□□□ -0.75
PKP4-202ENST00000389759 NEXNQ0ZGT2 675 aa10.39□□□□□ -0.75
PKP4-202ENST00000389759 LRRFIP1Q32MZ4 808 aaKnown RBP10.39□□□□□ -0.75
PKP4-202ENST00000389759 SLC12A5Q9H2X9 1139 aa10.39□□□□□ -0.75
PKP4-202ENST00000389759 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
PKP4-202ENST00000389759 UBTFL1P0CB47 393 aaPredicted RBP10.39□□□□□ -0.75
PKP4-202ENST00000389759 CLCN1P35523 988 aa10.39□□□□□ -0.75
PKP4-202ENST00000389759 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
PKP4-202ENST00000389759 TRIM29Q14134 588 aa10.39□□□□□ -0.75
PKP4-202ENST00000389759 TMEM132EQ6IEE7 984 aa10.39□□□□□ -0.75
PKP4-202ENST00000389759 ACBD3Q9H3P7 528 aa10.39□□□□□ -0.75
PKP4-202ENST00000389759 HOOK1Q9UJC3 728 aaKnown RBP10.39□□□□□ -0.75
PKP4-202ENST00000389759 PSMA5P28066 241 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 CNTROBQ8N137 903 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 EFCAB5A4FU69 1503 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 SYCE3A1L190 88 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 KINO60870 393 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms