RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 SIL1Q9H173 461 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 CABP1Q9NZU7 370 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 NEK4P51957 841 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 EVA1CP58658 441 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 NLRP6P59044 892 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 LARP6Q9BRS8 491 aaKnown RBP6.1□□□□□ -1.43
LTN1-202ENST00000389194 KAT6BQ8WYB5 2073 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 ATP2B1P20020 1258 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 GOLGA6L19H0YKK7 550 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 RAPGEF3O95398 923 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 STK3Q13188 491 aa6.1□□□□□ -1.43
LTN1-202ENST00000389194 SURF6O75683 361 aaKnown RBP6.09□□□□□ -1.43
LTN1-202ENST00000389194 NOC3LQ8WTT2 800 aaKnown RBP6.09□□□□□ -1.43
LTN1-202ENST00000389194 FMNL2Q96PY5 1086 aa6.09□□□□□ -1.43
LTN1-202ENST00000389194 SULT6B1Q6IMI4 303 aa6.09□□□□□ -1.43
LTN1-202ENST00000389194 SPC24Q8NBT2 197 aa6.09□□□□□ -1.43
LTN1-202ENST00000389194 FIBPO43427 364 aa6.09□□□□□ -1.44
LTN1-202ENST00000389194 REC8O95072 547 aa6.09□□□□□ -1.44
LTN1-202ENST00000389194 CFAP44Q96MT7 982 aa6.09□□□□□ -1.44
LTN1-202ENST00000389194 NLRP2Q9NX02 1062 aa6.09□□□□□ -1.44
LTN1-202ENST00000389194 TTC5Q8N0Z6 440 aa6.09□□□□□ -1.44
LTN1-202ENST00000389194 CCDC85AQ96PX6 553 aaPredicted RBP6.09□□□□□ -1.44
LTN1-202ENST00000389194 SMARCA5O60264 1052 aaPredicted RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 SLC4A2P04920 1241 aa6.08□□□□□ -1.44
LTN1-202ENST00000389194 SLC26A8Q96RN1 970 aa6.08□□□□□ -1.44
LTN1-202ENST00000389194 IL1RAPL2Q9NP60 686 aa6.08□□□□□ -1.44
LTN1-202ENST00000389194 SMC3Q9UQE7 1217 aa6.08□□□□□ -1.44
LTN1-202ENST00000389194 TWISTNBQ3B726 338 aaPredicted RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 DNAJC2Q99543 621 aaKnown RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 NASPP49321 788 aaPredicted RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 TTLL5Q6EMB2 1281 aa6.08□□□□□ -1.44
LTN1-202ENST00000389194 BRD4O60885 1362 aaPredicted RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 RIC3Q7Z5B4 369 aa6.08□□□□□ -1.44
LTN1-202ENST00000389194 FAM43AQ8N2R8 423 aa6.08□□□□□ -1.44
LTN1-202ENST00000389194 RRBP1Q9P2E9 1410 aaKnown RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 CDK13Q14004 1512 aaKnown RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 G3BP1Q13283 466 aaKnown RBP eCLIP6.08□□□□□ -1.44
LTN1-202ENST00000389194 SPINK5Q9NQ38 1064 aaPredicted RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 INTS3Q68E01 1043 aaKnown RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 API5Q9BZZ5 524 aaKnown RBP6.08□□□□□ -1.44
LTN1-202ENST00000389194 HTATSF1O43719 755 aaKnown RBP6.07□□□□□ -1.44
LTN1-202ENST00000389194 NEXNQ0ZGT2 675 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 TPD52L1Q16890 204 aaPredicted RBP6.07□□□□□ -1.44
LTN1-202ENST00000389194 ABTB2Q8N961 1025 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 G3V3G9 751 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 PPFIA3O75145 1194 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 ZKSCAN1P17029 563 aaPredicted RBP6.07□□□□□ -1.44
LTN1-202ENST00000389194 WASHC4Q2M389 1173 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 DCAF8Q5TAQ9 597 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 MARCH6O60337 910 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 PHF14O94880 888 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 UBTFL1P0CB47 393 aaPredicted RBP6.07□□□□□ -1.44
LTN1-202ENST00000389194 PTMSP20962 102 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 GNAI1P63096 354 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 RSPH6AQ9H0K4 717 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 MYL6BP14649 208 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 WAPLQ7Z5K2 1190 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 ARHGAP5Q13017 1502 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 IFT57Q9NWB7 429 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 CPLX1O14810 134 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 SKIDA1Q1XH10 827 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 CDK19Q9BWU1 502 aa6.07□□□□□ -1.44
LTN1-202ENST00000389194 TPM4P67936 248 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 TMEM57Q8N5G2 664 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 CASKIN1Q8WXD9 1431 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 TNNT3P45378 269 aaPredicted RBP6.06□□□□□ -1.44
LTN1-202ENST00000389194 TSHZ3Q63HK5 1081 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 NFXL1Q6ZNB6 911 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 MCM10Q7L590 875 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 HOMER1Q86YM7 354 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 EXOC6BQ9Y2D4 811 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 CDC45O75419 566 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 FBXO3Q9UK99 471 aa6.06□□□□□ -1.44
LTN1-202ENST00000389194 PATL2C9JE40 543 aaKnown RBP6.06□□□□□ -1.44
LTN1-202ENST00000389194 SCAPERQ9BY12 1400 aa6.05□□□□□ -1.44
LTN1-202ENST00000389194 DHX16O60231 1041 aaKnown RBP6.05□□□□□ -1.44
LTN1-202ENST00000389194 ESCO1Q5FWF5 840 aa6.05□□□□□ -1.44
LTN1-202ENST00000389194 CSPP1Q1MSJ5 1256 aa6.05□□□□□ -1.44
LTN1-202ENST00000389194 SKOR2Q2VWA4 1001 aaPredicted RBP6.05□□□□□ -1.44
LTN1-202ENST00000389194 ZNF771Q7L3S4 317 aaPredicted RBP6.05□□□□□ -1.44
LTN1-202ENST00000389194 USHBP1Q8N6Y0 703 aa6.05□□□□□ -1.44
LTN1-202ENST00000389194 FSD1Q9BTV5 496 aa6.05□□□□□ -1.44
LTN1-202ENST00000389194 STRN4Q9NRL3 753 aa6.05□□□□□ -1.44
LTN1-202ENST00000389194 F6X3S4 739 aa6.05□□□□□ -1.44
LTN1-202ENST00000389194 PCMTD1Q96MG8 357 aaPredicted RBP6.05□□□□□ -1.44
LTN1-202ENST00000389194 MAPK8IP2Q13387 824 aaPredicted RBP6.05□□□□□ -1.44
LTN1-202ENST00000389194 RRP12Q5JTH9 1297 aaKnown RBP6.05□□□□□ -1.44
LTN1-202ENST00000389194 UPF3BQ9BZI7 483 aaKnown RBP6.05□□□□□ -1.44
LTN1-202ENST00000389194 A0A0U1RQG5 324 aaPredicted RBP6.04□□□□□ -1.44
LTN1-202ENST00000389194 NUTM1Q86Y26 1132 aa6.04□□□□□ -1.44
LTN1-202ENST00000389194 CUX1P39880 1505 aa6.04□□□□□ -1.44
LTN1-202ENST00000389194 AKAP17AQ02040 695 aaKnown RBP6.04□□□□□ -1.44
LTN1-202ENST00000389194 TNNQ9UQP3 1299 aa6.04□□□□□ -1.44
LTN1-202ENST00000389194 ATF7IPQ6VMQ6 1270 aa6.04□□□□□ -1.44
LTN1-202ENST00000389194 VPS37DQ86XT2 251 aa6.04□□□□□ -1.44
LTN1-202ENST00000389194 FYCO1Q9BQS8 1478 aa6.04□□□□□ -1.44
LTN1-202ENST00000389194 CWC27Q6UX04 472 aaKnown RBP6.04□□□□□ -1.44
LTN1-202ENST00000389194 C9orf84Q5VXU9 1444 aa6.04□□□□□ -1.44
LTN1-202ENST00000389194 PDILTQ8N807 584 aa6.04□□□□□ -1.44
LTN1-202ENST00000389194 RUFY2Q8WXA3 655 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms