RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 MOXD2PA6NHM9 499 aa5.49□□□□□ -1.53
RNU6-541P-201ENST00000384709 FMNL1O95466 1100 aaPredicted RBP5.49□□□□□ -1.53
RNU6-541P-201ENST00000384709 Q3C1V9 767 aa5.49□□□□□ -1.53
RNU6-541P-201ENST00000384709 MYSM1Q5VVJ2 828 aa5.49□□□□□ -1.53
RNU6-541P-201ENST00000384709 RSBN1LQ6PCB5 846 aaPredicted RBP5.49□□□□□ -1.53
RNU6-541P-201ENST00000384709 NKX2-3Q8TAU0 364 aa5.49□□□□□ -1.53
RNU6-541P-201ENST00000384709 FAM117AQ9C073 453 aa5.49□□□□□ -1.53
RNU6-541P-201ENST00000384709 PCDHGC3Q9UN70 934 aa5.49□□□□□ -1.53
RNU6-541P-201ENST00000384709 NRG2O14511 850 aaPredicted RBP5.48□□□□□ -1.53
RNU6-541P-201ENST00000384709 FDX1P10109 184 aa5.48□□□□□ -1.53
RNU6-541P-201ENST00000384709 PRPF38BQ5VTL8 546 aaKnown RBP5.48□□□□□ -1.53
RNU6-541P-201ENST00000384709 FAM160A2Q8N612 972 aaPredicted RBP5.48□□□□□ -1.53
RNU6-541P-201ENST00000384709 HLA-CQ95604 372 aa5.48□□□□□ -1.53
RNU6-541P-201ENST00000384709 SPSB2Q99619 263 aa5.48□□□□□ -1.53
RNU6-541P-201ENST00000384709 RSPH6AQ9H0K4 717 aa5.48□□□□□ -1.53
RNU6-541P-201ENST00000384709 TLL1O43897 1013 aa5.47□□□□□ -1.53
RNU6-541P-201ENST00000384709 SKIV2LQ15477 1246 aaKnown RBP5.47□□□□□ -1.53
RNU6-541P-201ENST00000384709 SH3D19Q5HYK7 790 aa5.47□□□□□ -1.53
RNU6-541P-201ENST00000384709 RNF19BQ6ZMZ0 732 aa5.47□□□□□ -1.53
RNU6-541P-201ENST00000384709 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.47□□□□□ -1.53
RNU6-541P-201ENST00000384709 SPDYE5A6NIY4 337 aa5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 NDUFV2P19404 249 aa5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 MMP16P51512 607 aa5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 GUCA2AQ02747 115 aa5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 NEUROD2Q15784 382 aa5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 PPP1R18Q6NYC8 613 aa5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 RIC3Q7Z5B4 369 aa5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 RETREG3Q86VR2 466 aa5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 USB1Q9BQ65 265 aaKnown RBP5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.46□□□□□ -1.54
RNU6-541P-201ENST00000384709 LILRB3O75022 631 aa5.45□□□□□ -1.54
RNU6-541P-201ENST00000384709 PPP2R2DQ66LE6 453 aa5.45□□□□□ -1.54
RNU6-541P-201ENST00000384709 DESI1Q6ICB0 168 aa5.45□□□□□ -1.54
RNU6-541P-201ENST00000384709 ANKLE1Q8NAG6 615 aa5.45□□□□□ -1.54
RNU6-541P-201ENST00000384709 SLC6A16Q9GZN6 736 aa5.45□□□□□ -1.54
RNU6-541P-201ENST00000384709 LIMD1Q9UGP4 676 aa5.45□□□□□ -1.54
RNU6-541P-201ENST00000384709 DXOO77932 396 aaKnown RBP5.44□□□□□ -1.54
RNU6-541P-201ENST00000384709 GGCXP38435 758 aa5.44□□□□□ -1.54
RNU6-541P-201ENST00000384709 CLK2P49760 499 aaKnown RBP5.44□□□□□ -1.54
RNU6-541P-201ENST00000384709 PCDHB15Q9Y5E8 787 aa5.44□□□□□ -1.54
RNU6-541P-201ENST00000384709 RNF223E7ERA6 249 aa5.43□□□□□ -1.54
RNU6-541P-201ENST00000384709 MTMR2Q13614 643 aa5.43□□□□□ -1.54
RNU6-541P-201ENST00000384709 S1PR4O95977 384 aa5.42□□□□□ -1.54
RNU6-541P-201ENST00000384709 JUNDP17535 347 aa5.42□□□□□ -1.54
RNU6-541P-201ENST00000384709 HRCP23327 699 aa5.42□□□□□ -1.54
RNU6-541P-201ENST00000384709 EMID1Q96A84 441 aaPredicted RBP5.42□□□□□ -1.54
RNU6-541P-201ENST00000384709 ZBTB3Q9H5J0 574 aa5.42□□□□□ -1.54
RNU6-541P-201ENST00000384709 V9GY48 417 aaPredicted RBP5.42□□□□□ -1.54
RNU6-541P-201ENST00000384709 POTECB2RU33 542 aa5.41□□□□□ -1.54
RNU6-541P-201ENST00000384709 SYMPKQ92797 1274 aaKnown RBP5.41□□□□□ -1.54
RNU6-541P-201ENST00000384709 FBXO31Q5XUX0 539 aaPredicted RBP5.4□□□□□ -1.54
RNU6-541P-201ENST00000384709 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
RNU6-541P-201ENST00000384709 PRDM9Q9NQV7 894 aa5.4□□□□□ -1.54
RNU6-541P-201ENST00000384709 RPIAP49247 311 aa5.39□□□□□ -1.55
RNU6-541P-201ENST00000384709 QPCTQ16769 361 aa5.39□□□□□ -1.55
RNU6-541P-201ENST00000384709 PTPRNQ16849 979 aa5.39□□□□□ -1.55
RNU6-541P-201ENST00000384709 PLA2G2CQ5R387 149 aa5.39□□□□□ -1.55
RNU6-541P-201ENST00000384709 PROCA1Q8NCQ7 364 aaPredicted RBP5.39□□□□□ -1.55
RNU6-541P-201ENST00000384709 IL27Q8NEV9 243 aa5.39□□□□□ -1.55
RNU6-541P-201ENST00000384709 PRR7Q8TB68 274 aa5.39□□□□□ -1.55
RNU6-541P-201ENST00000384709 CFAP99D6REC4 459 aa5.38□□□□□ -1.55
RNU6-541P-201ENST00000384709 C6orf229H3BNL8 230 aa5.38□□□□□ -1.55
RNU6-541P-201ENST00000384709 PPEF1O14829 653 aaPredicted RBP5.38□□□□□ -1.55
RNU6-541P-201ENST00000384709 RTL5Q5HYW3 569 aaPredicted RBP5.38□□□□□ -1.55
RNU6-541P-201ENST00000384709 LYPD8Q6UX82 237 aa5.38□□□□□ -1.55
RNU6-541P-201ENST00000384709 CABLES1Q8TDN4 633 aa5.38□□□□□ -1.55
RNU6-541P-201ENST00000384709 POLR3EQ9NVU0 708 aa5.38□□□□□ -1.55
RNU6-541P-201ENST00000384709 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
RNU6-541P-201ENST00000384709 LIAT1Q6ZQX7 453 aa5.37□□□□□ -1.55
RNU6-541P-201ENST00000384709 EVA1BQ9NVM1 165 aa5.37□□□□□ -1.55
RNU6-541P-201ENST00000384709 FCF1Q9Y324 198 aaKnown RBP5.37□□□□□ -1.55
RNU6-541P-201ENST00000384709 SOCS7O14512 581 aa5.36□□□□□ -1.55
RNU6-541P-201ENST00000384709 F12P00748 615 aaPredicted RBP5.36□□□□□ -1.55
RNU6-541P-201ENST00000384709 SPRYD7Q5W111 196 aa5.36□□□□□ -1.55
RNU6-541P-201ENST00000384709 PCMTD1Q96MG8 357 aaPredicted RBP5.36□□□□□ -1.55
RNU6-541P-201ENST00000384709 CCNYL3P0C7X3 344 aa5.35□□□□□ -1.55
RNU6-541P-201ENST00000384709 SLC19A1P41440 591 aa5.35□□□□□ -1.55
RNU6-541P-201ENST00000384709 ZNF598Q86UK7 904 aaKnown RBP5.35□□□□□ -1.55
RNU6-541P-201ENST00000384709 NUDT12Q9BQG2 462 aa5.35□□□□□ -1.55
RNU6-541P-201ENST00000384709 PRKD2Q9BZL6 878 aa5.35□□□□□ -1.55
RNU6-541P-201ENST00000384709 RFC5P40937 340 aa5.34□□□□□ -1.55
RNU6-541P-201ENST00000384709 INSM1Q01101 510 aaPredicted RBP5.34□□□□□ -1.55
RNU6-541P-201ENST00000384709 KCNH2Q12809 1159 aa5.34□□□□□ -1.55
RNU6-541P-201ENST00000384709 TMEM132AQ24JP5 1023 aa5.34□□□□□ -1.55
RNU6-541P-201ENST00000384709 NUTM2BA6NNL0 878 aaPredicted RBP5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 NUTM2EB1AL46 878 aaPredicted RBP5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 PER1O15534 1290 aaPredicted RBP5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 PRR20EP86478 221 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 PRR20CP86479 221 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 PRR20DP86480 221 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 PRR20BP86481 221 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 PRR20AP86496 221 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 CSPP1Q1MSJ5 1256 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 TMEM259Q4ZIN3 620 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 NUTM2DQ5VT03 806 aaPredicted RBP5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 NUTM2AQ8IVF1 878 aaPredicted RBP5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 BANK1Q8NDB2 785 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
RNU6-541P-201ENST00000384709 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
RNU6-541P-201ENST00000384709 CTDSPL2Q05D32 466 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms