RNA–Protein interactions for RNA: ENST00000383693.7

LNP1-201, Transcript of leukemia NUP98 fusion partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LNP1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-201ENST00000383693 PPP2R1AP30153 589 aa17.6■□□□□ 0.41
LNP1-201ENST00000383693 ARHGEF28Q8N1W1 1705 aaKnown RBP17.6■□□□□ 0.41
LNP1-201ENST00000383693 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
LNP1-201ENST00000383693 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
LNP1-201ENST00000383693 QRICH2Q9H0J4 1663 aa17.59■□□□□ 0.41
LNP1-201ENST00000383693 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
LNP1-201ENST00000383693 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
LNP1-201ENST00000383693 PTPRMP28827 1452 aa17.58■□□□□ 0.41
LNP1-201ENST00000383693 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.41
LNP1-201ENST00000383693 TMEM2Q9UHN6 1383 aa17.58■□□□□ 0.4
LNP1-201ENST00000383693 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
LNP1-201ENST00000383693 LTKP29376 864 aa17.54■□□□□ 0.4
LNP1-201ENST00000383693 STK26Q9P289 416 aa17.54■□□□□ 0.4
LNP1-201ENST00000383693 ZNF142P52746 1687 aaPredicted RBP17.53■□□□□ 0.4
LNP1-201ENST00000383693 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.52■□□□□ 0.4
LNP1-201ENST00000383693 SLIT1O75093 1534 aa17.52■□□□□ 0.4
LNP1-201ENST00000383693 ARHGAP23Q9P227 1491 aa17.52■□□□□ 0.39
LNP1-201ENST00000383693 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
LNP1-201ENST00000383693 SETD1BQ9UPS6 1966 aaKnown RBP17.51■□□□□ 0.39
LNP1-201ENST00000383693 PLIN1O60240 522 aa17.51■□□□□ 0.39
LNP1-201ENST00000383693 YTHDC2Q9H6S0 1430 aaKnown RBP17.51■□□□□ 0.39
LNP1-201ENST00000383693 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
LNP1-201ENST00000383693 CENPJQ9HC77 1338 aaPredicted RBP17.51■□□□□ 0.39
LNP1-201ENST00000383693 WDR43Q15061 677 aaKnown RBP eCLIP17.51■□□□□ 0.39
LNP1-201ENST00000383693 TXNDC2Q86VQ3 553 aa17.49■□□□□ 0.39
LNP1-201ENST00000383693 CARD14Q9BXL6 1004 aa17.49■□□□□ 0.39
LNP1-201ENST00000383693 METP08581 1390 aa17.49■□□□□ 0.39
LNP1-201ENST00000383693 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
LNP1-201ENST00000383693 ADAMTS13Q76LX8 1427 aa17.47■□□□□ 0.39
LNP1-201ENST00000383693 ZNF521Q96K83 1311 aa17.46■□□□□ 0.39
LNP1-201ENST00000383693 PLEKHG1Q9ULL1 1385 aa17.46■□□□□ 0.39
LNP1-201ENST00000383693 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
LNP1-201ENST00000383693 THEMISQ8N1K5 641 aaPredicted RBP17.46■□□□□ 0.39
LNP1-201ENST00000383693 SBNO2Q9Y2G9 1366 aa17.46■□□□□ 0.38
LNP1-201ENST00000383693 SLC24A1O60721 1099 aa17.45■□□□□ 0.38
LNP1-201ENST00000383693 TULP4Q9NRJ4 1543 aa17.45■□□□□ 0.38
LNP1-201ENST00000383693 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
LNP1-201ENST00000383693 PRAM1Q96QH2 718 aa17.44■□□□□ 0.38
LNP1-201ENST00000383693 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
LNP1-201ENST00000383693 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
LNP1-201ENST00000383693 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
LNP1-201ENST00000383693 CCDC146Q8IYE0 955 aa17.43■□□□□ 0.38
LNP1-201ENST00000383693 SLC26A8Q96RN1 970 aa17.43■□□□□ 0.38
LNP1-201ENST00000383693 CRBNQ96SW2 442 aa17.43■□□□□ 0.38
LNP1-201ENST00000383693 C20orf194Q5TEA3 1177 aa17.42■□□□□ 0.38
LNP1-201ENST00000383693 MED14O60244 1454 aa17.42■□□□□ 0.38
LNP1-201ENST00000383693 DLC1Q96QB1 1528 aa17.41■□□□□ 0.38
LNP1-201ENST00000383693 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
LNP1-201ENST00000383693 WAPLQ7Z5K2 1190 aa17.4■□□□□ 0.38
LNP1-201ENST00000383693 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
LNP1-201ENST00000383693 POGKQ9P215 609 aa17.39■□□□□ 0.37
LNP1-201ENST00000383693 PTPRUQ92729 1446 aa17.39■□□□□ 0.37
LNP1-201ENST00000383693 ABCC11Q96J66 1382 aa17.39■□□□□ 0.37
LNP1-201ENST00000383693 CPS1P31327 1500 aa17.38■□□□□ 0.37
LNP1-201ENST00000383693 KDM4FA0A1W2PPD8 638 aa17.38■□□□□ 0.37
LNP1-201ENST00000383693 APAF1O14727 1248 aa17.38■□□□□ 0.37
LNP1-201ENST00000383693 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
LNP1-201ENST00000383693 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
LNP1-201ENST00000383693 SLC12A5Q9H2X9 1139 aa17.37■□□□□ 0.37
LNP1-201ENST00000383693 TCERG1O14776 1098 aaKnown RBP17.36■□□□□ 0.37
LNP1-201ENST00000383693 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
LNP1-201ENST00000383693 TRMT2AQ8IZ69 625 aaKnown RBP17.36■□□□□ 0.37
LNP1-201ENST00000383693 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
LNP1-201ENST00000383693 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
LNP1-201ENST00000383693 TECPR2O15040 1411 aa17.35■□□□□ 0.37
LNP1-201ENST00000383693 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
LNP1-201ENST00000383693 DIP2AQ14689 1571 aa17.35■□□□□ 0.37
LNP1-201ENST00000383693 EVC2Q86UK5 1308 aa17.35■□□□□ 0.37
LNP1-201ENST00000383693 ROBO2Q9HCK4 1378 aa17.34■□□□□ 0.37
LNP1-201ENST00000383693 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
LNP1-201ENST00000383693 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
LNP1-201ENST00000383693 ANKLE2Q86XL3 938 aa17.33■□□□□ 0.36
LNP1-201ENST00000383693 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
LNP1-201ENST00000383693 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.33■□□□□ 0.36
LNP1-201ENST00000383693 XRN1Q8IZH2 1706 aaKnown RBP17.32■□□□□ 0.36
LNP1-201ENST00000383693 IPO9Q96P70 1041 aaKnown RBP17.32■□□□□ 0.36
LNP1-201ENST00000383693 POLR3AO14802 1390 aaPredicted RBP17.32■□□□□ 0.36
LNP1-201ENST00000383693 PDE4AP27815 886 aa17.32■□□□□ 0.36
LNP1-201ENST00000383693 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
LNP1-201ENST00000383693 SHPRHQ149N8 1683 aa17.31■□□□□ 0.36
LNP1-201ENST00000383693 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
LNP1-201ENST00000383693 MORC1Q86VD1 984 aa17.31■□□□□ 0.36
LNP1-201ENST00000383693 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
LNP1-201ENST00000383693 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
LNP1-201ENST00000383693 NCKAP5LQ9HCH0 1330 aa17.3■□□□□ 0.36
LNP1-201ENST00000383693 CHD2O14647 1828 aaKnown RBP17.29■□□□□ 0.36
LNP1-201ENST00000383693 MS4A1P11836 297 aa17.29■□□□□ 0.36
LNP1-201ENST00000383693 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
LNP1-201ENST00000383693 AMOTL2Q9Y2J4 779 aa17.29■□□□□ 0.36
LNP1-201ENST00000383693 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
LNP1-201ENST00000383693 CDK19Q9BWU1 502 aa17.29■□□□□ 0.36
LNP1-201ENST00000383693 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
LNP1-201ENST00000383693 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.36
LNP1-201ENST00000383693 E9PSI1 815 aa17.27■□□□□ 0.36
LNP1-201ENST00000383693 BCAR3O75815 825 aa17.27■□□□□ 0.35
LNP1-201ENST00000383693 USP32Q8NFA0 1604 aa17.27■□□□□ 0.35
LNP1-201ENST00000383693 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
LNP1-201ENST00000383693 HSPA2P54652 639 aa17.25■□□□□ 0.35
LNP1-201ENST00000383693 SIRT1Q96EB6 747 aa17.25■□□□□ 0.35
LNP1-201ENST00000383693 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms