RNA–Protein interactions for RNA: ENST00000381105.2

FAM239C-201, Transcript of family with sequence similarity 239 member C, humanhuman

TSL 5 BASIC

Gene FAM239C, Length 2,118 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239C-201ENST00000381105 KCNA6P17658 529 aa16.09■□□□□ 0.17
FAM239C-201ENST00000381105 FKBP8Q14318 412 aa16.09■□□□□ 0.17
FAM239C-201ENST00000381105 TMF1P82094 1093 aa16.09■□□□□ 0.17
FAM239C-201ENST00000381105 PRKCSHP14314 528 aaPredicted RBP16.08■□□□□ 0.16
FAM239C-201ENST00000381105 DIP2AQ14689 1571 aa16.08■□□□□ 0.16
FAM239C-201ENST00000381105 STRCQ7RTU9 1775 aa16.06■□□□□ 0.16
FAM239C-201ENST00000381105 TECPR2O15040 1411 aa16.05■□□□□ 0.16
FAM239C-201ENST00000381105 CPS1P31327 1500 aa16.05■□□□□ 0.16
FAM239C-201ENST00000381105 DLC1Q96QB1 1528 aa16.05■□□□□ 0.16
FAM239C-201ENST00000381105 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
FAM239C-201ENST00000381105 CABP2Q9NPB3 220 aa16.04■□□□□ 0.16
FAM239C-201ENST00000381105 TULP4Q9NRJ4 1543 aa16.04■□□□□ 0.16
FAM239C-201ENST00000381105 KNDC1Q76NI1 1749 aa16.03■□□□□ 0.16
FAM239C-201ENST00000381105 XRN1Q8IZH2 1706 aaKnown RBP16.03■□□□□ 0.16
FAM239C-201ENST00000381105 SBNO2Q9Y2G9 1366 aa16.02■□□□□ 0.16
FAM239C-201ENST00000381105 SRPK2P78362 688 aaKnown RBP16.02■□□□□ 0.16
FAM239C-201ENST00000381105 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
FAM239C-201ENST00000381105 FAM135BQ49AJ0 1406 aa16.01■□□□□ 0.15
FAM239C-201ENST00000381105 EVC2Q86UK5 1308 aa16■□□□□ 0.15
FAM239C-201ENST00000381105 PIK3R4Q99570 1358 aa16■□□□□ 0.15
FAM239C-201ENST00000381105 CHD2O14647 1828 aaKnown RBP16■□□□□ 0.15
FAM239C-201ENST00000381105 PTCH1Q13635 1447 aa16■□□□□ 0.15
FAM239C-201ENST00000381105 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
FAM239C-201ENST00000381105 CDK19Q9BWU1 502 aa16■□□□□ 0.15
FAM239C-201ENST00000381105 TMC1Q8TDI8 760 aa15.99■□□□□ 0.15
FAM239C-201ENST00000381105 ZNF335Q9H4Z2 1342 aaPredicted RBP15.98■□□□□ 0.15
FAM239C-201ENST00000381105 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
FAM239C-201ENST00000381105 MIER1Q8N108 512 aa15.97■□□□□ 0.15
FAM239C-201ENST00000381105 SIRT1Q96EB6 747 aa15.97■□□□□ 0.15
FAM239C-201ENST00000381105 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
FAM239C-201ENST00000381105 C14orf37Q86TY3 774 aa15.96■□□□□ 0.15
FAM239C-201ENST00000381105 STRCP1A6NGW2 1772 aa15.96■□□□□ 0.15
FAM239C-201ENST00000381105 WASLO00401 505 aaPredicted RBP15.95■□□□□ 0.14
FAM239C-201ENST00000381105 PROSER2Q86WR7 435 aaPredicted RBP15.95■□□□□ 0.14
FAM239C-201ENST00000381105 PANK3Q9H999 370 aa15.95■□□□□ 0.14
FAM239C-201ENST00000381105 MYOM1P52179 1685 aa15.95■□□□□ 0.14
FAM239C-201ENST00000381105 NWD1Q149M9 1564 aa15.94■□□□□ 0.14
FAM239C-201ENST00000381105 PRR36Q9H6K5 1346 aa15.92■□□□□ 0.14
FAM239C-201ENST00000381105 NALCNQ8IZF0 1738 aa15.92■□□□□ 0.14
FAM239C-201ENST00000381105 PLCB2Q00722 1185 aa15.91■□□□□ 0.14
FAM239C-201ENST00000381105 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
FAM239C-201ENST00000381105 TMEM94Q12767 1356 aa15.91■□□□□ 0.14
FAM239C-201ENST00000381105 NUDT16Q96DE0 195 aaKnown RBP15.91■□□□□ 0.14
FAM239C-201ENST00000381105 ADGRB2O60241 1585 aa15.89■□□□□ 0.13
FAM239C-201ENST00000381105 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
FAM239C-201ENST00000381105 NKTRP30414 1462 aaKnown RBP15.89■□□□□ 0.13
FAM239C-201ENST00000381105 ATP7BP35670 1465 aa15.88■□□□□ 0.13
FAM239C-201ENST00000381105 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
FAM239C-201ENST00000381105 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
FAM239C-201ENST00000381105 ADGRL3Q9HAR2 1447 aa15.87■□□□□ 0.13
FAM239C-201ENST00000381105 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
FAM239C-201ENST00000381105 PPIP5K1Q6PFW1 1433 aa15.87■□□□□ 0.13
FAM239C-201ENST00000381105 PER1O15534 1290 aaPredicted RBP15.86■□□□□ 0.13
FAM239C-201ENST00000381105 CC2D1BQ5T0F9 858 aaKnown RBP15.86■□□□□ 0.13
FAM239C-201ENST00000381105 ANP32CO43423 234 aa15.86■□□□□ 0.13
FAM239C-201ENST00000381105 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
FAM239C-201ENST00000381105 A0A1W2PP64 1363 aa15.86■□□□□ 0.13
FAM239C-201ENST00000381105 USP32Q8NFA0 1604 aa15.85■□□□□ 0.13
FAM239C-201ENST00000381105 CCDC61Q9Y6R9 512 aa15.85■□□□□ 0.13
FAM239C-201ENST00000381105 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
FAM239C-201ENST00000381105 NSD3Q9BZ95 1437 aa15.84■□□□□ 0.13
FAM239C-201ENST00000381105 PUS7Q96PZ0 661 aaKnown RBP15.84■□□□□ 0.13
FAM239C-201ENST00000381105 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
FAM239C-201ENST00000381105 LRRC7Q96NW7 1537 aa15.84■□□□□ 0.13
FAM239C-201ENST00000381105 TAOK2Q9UL54 1235 aa15.83■□□□□ 0.13
FAM239C-201ENST00000381105 RGPD8O14715 1765 aaPredicted RBP15.83■□□□□ 0.12
FAM239C-201ENST00000381105 CDC42BPGQ6DT37 1551 aa15.83■□□□□ 0.12
FAM239C-201ENST00000381105 ANKRD36BQ8N2N9 1353 aa15.82■□□□□ 0.12
FAM239C-201ENST00000381105 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
FAM239C-201ENST00000381105 C19orf44Q9H6X5 657 aa15.82■□□□□ 0.12
FAM239C-201ENST00000381105 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
FAM239C-201ENST00000381105 PRKRIP1Q9H875 184 aaPredicted RBP15.81■□□□□ 0.12
FAM239C-201ENST00000381105 XIRP1Q702N8 1843 aaKnown RBP15.81■□□□□ 0.12
FAM239C-201ENST00000381105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.8■□□□□ 0.12
FAM239C-201ENST00000381105 TERF2IPQ9NYB0 399 aa15.8■□□□□ 0.12
FAM239C-201ENST00000381105 ESCO1Q5FWF5 840 aa15.8■□□□□ 0.12
FAM239C-201ENST00000381105 ORAI2Q96SN7 254 aa15.8■□□□□ 0.12
FAM239C-201ENST00000381105 ACEP12821 1306 aa15.8■□□□□ 0.12
FAM239C-201ENST00000381105 NINLQ9Y2I6 1382 aa15.8■□□□□ 0.12
FAM239C-201ENST00000381105 ATF3P18847 181 aa15.79■□□□□ 0.12
FAM239C-201ENST00000381105 HDGFL2Q7Z4V5 671 aaPredicted RBP15.79■□□□□ 0.12
FAM239C-201ENST00000381105 TOPAZ1Q8N9V7 1692 aa15.79■□□□□ 0.12
FAM239C-201ENST00000381105 KTN1Q86UP2 1357 aaKnown RBP15.78■□□□□ 0.12
FAM239C-201ENST00000381105 MSH6P52701 1360 aa15.78■□□□□ 0.12
FAM239C-201ENST00000381105 CCDC184Q52MB2 194 aa15.77■□□□□ 0.12
FAM239C-201ENST00000381105 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.12
FAM239C-201ENST00000381105 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.11
FAM239C-201ENST00000381105 XPCQ01831 940 aaPredicted RBP15.77■□□□□ 0.11
FAM239C-201ENST00000381105 ANKARQ7Z5J8 1434 aa15.77■□□□□ 0.11
FAM239C-201ENST00000381105 CPSF1Q10570 1443 aaKnown RBP15.76■□□□□ 0.11
FAM239C-201ENST00000381105 GGNBP2Q9H3C7 697 aa15.76■□□□□ 0.11
FAM239C-201ENST00000381105 PLEKHG3A1L390 1219 aa15.75■□□□□ 0.11
FAM239C-201ENST00000381105 ZRANB1Q9UGI0 708 aa15.75■□□□□ 0.11
FAM239C-201ENST00000381105 PHF8Q9UPP1 1060 aa15.75■□□□□ 0.11
FAM239C-201ENST00000381105 DDX17Q92841 729 aaKnown RBP15.74■□□□□ 0.11
FAM239C-201ENST00000381105 C1orf167Q5SNV9 1468 aa15.74■□□□□ 0.11
FAM239C-201ENST00000381105 MST1RQ04912 1400 aa15.74■□□□□ 0.11
FAM239C-201ENST00000381105 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
FAM239C-201ENST00000381105 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
FAM239C-201ENST00000381105 NME9Q86XW9 330 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms