RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 COL22A1Q8NFW1 1626 aaPredicted RBP25.54■■□□□ 1.68
HMGN1-204ENST00000380749 MYOM2P54296 1465 aa25.54■■□□□ 1.68
HMGN1-204ENST00000380749 ORAI2Q96SN7 254 aa25.54■■□□□ 1.68
HMGN1-204ENST00000380749 RAB3GAP2Q9H2M9 1393 aa25.54■■□□□ 1.68
HMGN1-204ENST00000380749 AFF2P51816 1311 aa25.53■■□□□ 1.68
HMGN1-204ENST00000380749 ABCC11Q96J66 1382 aa25.52■■□□□ 1.68
HMGN1-204ENST00000380749 SOS2Q07890 1332 aaPredicted RBP25.52■■□□□ 1.68
HMGN1-204ENST00000380749 STK26Q9P289 416 aa25.52■■□□□ 1.68
HMGN1-204ENST00000380749 KIF1AQ12756 1690 aa25.52■■□□□ 1.68
HMGN1-204ENST00000380749 YTHDC2Q9H6S0 1430 aaKnown RBP25.51■■□□□ 1.67
HMGN1-204ENST00000380749 NRXN1Q9ULB1 1477 aa25.51■■□□□ 1.67
HMGN1-204ENST00000380749 MARF1Q9Y4F3 1742 aaKnown RBP25.5■■□□□ 1.67
HMGN1-204ENST00000380749 CDK12Q9NYV4 1490 aaPredicted RBP25.5■■□□□ 1.67
HMGN1-204ENST00000380749 RGPD8O14715 1765 aaPredicted RBP25.48■■□□□ 1.67
HMGN1-204ENST00000380749 NPHP3Q7Z494 1330 aa25.47■■□□□ 1.67
HMGN1-204ENST00000380749 RXRBP28702 533 aa25.47■■□□□ 1.67
HMGN1-204ENST00000380749 TMEM132EQ6IEE7 984 aa25.47■■□□□ 1.67
HMGN1-204ENST00000380749 C8orf37Q96NL8 207 aa25.47■■□□□ 1.67
HMGN1-204ENST00000380749 ESCO1Q5FWF5 840 aa25.46■■□□□ 1.67
HMGN1-204ENST00000380749 WAPLQ7Z5K2 1190 aa25.46■■□□□ 1.67
HMGN1-204ENST00000380749 PXDNQ92626 1479 aa25.46■■□□□ 1.67
HMGN1-204ENST00000380749 PLEKHH1Q9ULM0 1364 aa25.44■■□□□ 1.66
HMGN1-204ENST00000380749 ADAMTS2O95450 1211 aa25.42■■□□□ 1.66
HMGN1-204ENST00000380749 C14orf93Q9H972 538 aaKnown RBP25.42■■□□□ 1.66
HMGN1-204ENST00000380749 DHX57Q6P158 1386 aaKnown RBP25.41■■□□□ 1.66
HMGN1-204ENST00000380749 NGLY1Q96IV0 654 aa25.4■■□□□ 1.66
HMGN1-204ENST00000380749 DLC1Q96QB1 1528 aa25.39■■□□□ 1.66
HMGN1-204ENST00000380749 NUTM2FA1L443 756 aa25.38■■□□□ 1.65
HMGN1-204ENST00000380749 SIRT1Q96EB6 747 aa25.38■■□□□ 1.65
HMGN1-204ENST00000380749 RGS12O14924 1447 aa25.36■■□□□ 1.65
HMGN1-204ENST00000380749 FOXO3O43524 673 aa25.36■■□□□ 1.65
HMGN1-204ENST00000380749 RBM6P78332 1123 aaKnown RBP25.36■■□□□ 1.65
HMGN1-204ENST00000380749 CFAP70Q5T0N1 1121 aa25.36■■□□□ 1.65
HMGN1-204ENST00000380749 ADGRB2O60241 1585 aa25.36■■□□□ 1.65
HMGN1-204ENST00000380749 QTRT2Q9H974 415 aaKnown RBP25.35■■□□□ 1.65
HMGN1-204ENST00000380749 XPCQ01831 940 aaPredicted RBP25.34■■□□□ 1.65
HMGN1-204ENST00000380749 ADGRB1O14514 1584 aa25.34■■□□□ 1.65
HMGN1-204ENST00000380749 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.33■■□□□ 1.65
HMGN1-204ENST00000380749 UPF1Q92900 1129 aaKnown RBP eCLIP25.31■■□□□ 1.64
HMGN1-204ENST00000380749 USP21Q9UK80 565 aa25.31■■□□□ 1.64
HMGN1-204ENST00000380749 USP32Q8NFA0 1604 aa25.3■■□□□ 1.64
HMGN1-204ENST00000380749 PRAM1Q96QH2 718 aa25.3■■□□□ 1.64
HMGN1-204ENST00000380749 ABCA3Q99758 1704 aa25.29■■□□□ 1.64
HMGN1-204ENST00000380749 HRCP23327 699 aa25.29■■□□□ 1.64
HMGN1-204ENST00000380749 EP400Q96L91 3159 aa25.28■■□□□ 1.64
HMGN1-204ENST00000380749 FNBP4Q8N3X1 1017 aaPredicted RBP25.28■■□□□ 1.64
HMGN1-204ENST00000380749 TRPC5Q9UL62 973 aaPredicted RBP25.28■■□□□ 1.64
HMGN1-204ENST00000380749 ARHGEF28Q8N1W1 1705 aaKnown RBP25.27■■□□□ 1.64
HMGN1-204ENST00000380749 SAFB2Q14151 953 aaKnown RBP eCLIP25.27■■□□□ 1.64
HMGN1-204ENST00000380749 POGKQ9P215 609 aa25.27■■□□□ 1.64
HMGN1-204ENST00000380749 ATRNO75882 1429 aa25.26■■□□□ 1.63
HMGN1-204ENST00000380749 ANKARQ7Z5J8 1434 aa25.26■■□□□ 1.63
HMGN1-204ENST00000380749 SPATA31A3Q5VYP0 1347 aa25.26■■□□□ 1.63
HMGN1-204ENST00000380749 TNS3Q68CZ2 1445 aa25.26■■□□□ 1.63
HMGN1-204ENST00000380749 PHF8Q9UPP1 1060 aa25.25■■□□□ 1.63
HMGN1-204ENST00000380749 ITSN1Q15811 1721 aa25.24■■□□□ 1.63
HMGN1-204ENST00000380749 DCAF11Q8TEB1 546 aa25.24■■□□□ 1.63
HMGN1-204ENST00000380749 STAC3Q96MF2 364 aa25.24■■□□□ 1.63
HMGN1-204ENST00000380749 KRT28Q7Z3Y7 464 aa25.23■■□□□ 1.63
HMGN1-204ENST00000380749 EIF3AQ14152 1382 aaKnown RBP25.23■■□□□ 1.63
HMGN1-204ENST00000380749 KDM2AQ9Y2K7 1162 aa25.22■■□□□ 1.63
HMGN1-204ENST00000380749 PLCH1Q4KWH8 1693 aa25.22■■□□□ 1.63
HMGN1-204ENST00000380749 KIAA1210Q9ULL0 1709 aa25.22■■□□□ 1.63
HMGN1-204ENST00000380749 PSME1Q06323 249 aa25.21■■□□□ 1.63
HMGN1-204ENST00000380749 NWD2Q9ULI1 1742 aa25.21■■□□□ 1.63
HMGN1-204ENST00000380749 TRPM3Q9HCF6 1732 aaPredicted RBP25.2■■□□□ 1.62
HMGN1-204ENST00000380749 BCL9LQ86UU0 1499 aa25.2■■□□□ 1.62
HMGN1-204ENST00000380749 TULP4Q9NRJ4 1543 aa25.2■■□□□ 1.62
HMGN1-204ENST00000380749 TRAK1Q9UPV9 953 aa25.19■■□□□ 1.62
HMGN1-204ENST00000380749 ATAD2Q6PL18 1390 aa25.19■■□□□ 1.62
HMGN1-204ENST00000380749 SBNO1A3KN83 1393 aa25.18■■□□□ 1.62
HMGN1-204ENST00000380749 ARHGEF10O15013 1369 aa25.18■■□□□ 1.62
HMGN1-204ENST00000380749 SLIT2O94813 1529 aa25.17■■□□□ 1.62
HMGN1-204ENST00000380749 ALS2Q96Q42 1657 aa25.16■■□□□ 1.62
HMGN1-204ENST00000380749 HAP1P54257 671 aaPredicted RBP25.16■■□□□ 1.62
HMGN1-204ENST00000380749 MINK1Q8N4C8 1332 aaPredicted RBP25.14■■□□□ 1.62
HMGN1-204ENST00000380749 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.61
HMGN1-204ENST00000380749 GLI3P10071 1580 aa25.13■■□□□ 1.61
HMGN1-204ENST00000380749 BRWD3Q6RI45 1802 aa25.12■■□□□ 1.61
HMGN1-204ENST00000380749 PMFBP1Q8TBY8 1022 aa25.12■■□□□ 1.61
HMGN1-204ENST00000380749 LMOD2Q6P5Q4 547 aa25.11■■□□□ 1.61
HMGN1-204ENST00000380749 UNC5CLQ8IV45 518 aa25.11■■□□□ 1.61
HMGN1-204ENST00000380749 GJD4Q96KN9 370 aaPredicted RBP25.1■■□□□ 1.61
HMGN1-204ENST00000380749 GPRASP1Q5JY77 1395 aa25.1■■□□□ 1.61
HMGN1-204ENST00000380749 RALGAPBQ86X10 1494 aa25.1■■□□□ 1.61
HMGN1-204ENST00000380749 CRYBG1Q9Y4K1 1723 aa25.09■■□□□ 1.61
HMGN1-204ENST00000380749 WASLO00401 505 aaPredicted RBP25.08■■□□□ 1.61
HMGN1-204ENST00000380749 TOPAZ1Q8N9V7 1692 aa25.08■■□□□ 1.61
HMGN1-204ENST00000380749 NRAPQ86VF7 1730 aa25.08■■□□□ 1.61
HMGN1-204ENST00000380749 CABLES1Q8TDN4 633 aa25.07■■□□□ 1.6
HMGN1-204ENST00000380749 PRR36Q9H6K5 1346 aa25.07■■□□□ 1.6
HMGN1-204ENST00000380749 ATP7BP35670 1465 aa25.07■■□□□ 1.6
HMGN1-204ENST00000380749 PLEKHG5O94827 1062 aa25.06■■□□□ 1.6
HMGN1-204ENST00000380749 COL14A1Q05707 1796 aaKnown RBP25.06■■□□□ 1.6
HMGN1-204ENST00000380749 NGDNQ8NEJ9 315 aaKnown RBP25.02■■□□□ 1.6
HMGN1-204ENST00000380749 SRCAPQ6ZRS2 3230 aa25.01■■□□□ 1.59
HMGN1-204ENST00000380749 PHRF1Q9P1Y6 1649 aaKnown RBP25■■□□□ 1.59
HMGN1-204ENST00000380749 QRICH2Q9H0J4 1663 aa24.99■■□□□ 1.59
HMGN1-204ENST00000380749 VPS72Q15906 364 aa24.99■■□□□ 1.59
HMGN1-204ENST00000380749 CCDC9Q9Y3X0 531 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms