RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.97
VPS16-203ENST00000380469 TMEM132EQ6IEE7 984 aa21.14■□□□□ 0.97
VPS16-203ENST00000380469 RUNDC1Q96C34 613 aa21.14■□□□□ 0.97
VPS16-203ENST00000380469 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
VPS16-203ENST00000380469 ZC3H13Q5T200 1668 aaKnown RBP21.13■□□□□ 0.97
VPS16-203ENST00000380469 CGNL1Q0VF96 1302 aa21.13■□□□□ 0.97
VPS16-203ENST00000380469 DAXXQ9UER7 740 aaPredicted RBP21.13■□□□□ 0.97
VPS16-203ENST00000380469 RGS3P49796 1198 aa21.12■□□□□ 0.97
VPS16-203ENST00000380469 C8orf34Q49A92 452 aa21.12■□□□□ 0.97
VPS16-203ENST00000380469 ADGRB1O14514 1584 aa21.12■□□□□ 0.97
VPS16-203ENST00000380469 CFAP53Q96M91 514 aa21.11■□□□□ 0.97
VPS16-203ENST00000380469 FRMPD1Q5SYB0 1578 aa21.1■□□□□ 0.97
VPS16-203ENST00000380469 HECW2Q9P2P5 1572 aa21.1■□□□□ 0.97
VPS16-203ENST00000380469 NEUROD2Q15784 382 aa21.1■□□□□ 0.97
VPS16-203ENST00000380469 SHPRHQ149N8 1683 aa21.09■□□□□ 0.97
VPS16-203ENST00000380469 PUS7Q96PZ0 661 aaKnown RBP21.09■□□□□ 0.97
VPS16-203ENST00000380469 EVC2Q86UK5 1308 aa21.08■□□□□ 0.97
VPS16-203ENST00000380469 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.97
VPS16-203ENST00000380469 TCP11L2Q8N4U5 519 aa21.08■□□□□ 0.97
VPS16-203ENST00000380469 USP32Q8NFA0 1604 aa21.08■□□□□ 0.96
VPS16-203ENST00000380469 ABCC3O15438 1527 aa21.08■□□□□ 0.96
VPS16-203ENST00000380469 MTHFSP49914 203 aa21.07■□□□□ 0.96
VPS16-203ENST00000380469 WDR63Q8IWG1 891 aa21.07■□□□□ 0.96
VPS16-203ENST00000380469 CLUAP1Q96AJ1 413 aa21.06■□□□□ 0.96
VPS16-203ENST00000380469 RRP7AQ9Y3A4 280 aaKnown RBP21.06■□□□□ 0.96
VPS16-203ENST00000380469 IGHDP01880 384 aa21.05■□□□□ 0.96
VPS16-203ENST00000380469 PANK1Q8TE04 598 aa21.05■□□□□ 0.96
VPS16-203ENST00000380469 FRAT1Q92837 279 aaPredicted RBP21.04■□□□□ 0.96
VPS16-203ENST00000380469 COG6Q9Y2V7 657 aa21.04■□□□□ 0.96
VPS16-203ENST00000380469 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
VPS16-203ENST00000380469 GLI2P10070 1586 aa21.03■□□□□ 0.96
VPS16-203ENST00000380469 NSD2O96028 1365 aa21.03■□□□□ 0.96
VPS16-203ENST00000380469 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
VPS16-203ENST00000380469 RARSP54136 660 aaKnown RBP21.03■□□□□ 0.96
VPS16-203ENST00000380469 AAMPQ13685 434 aa21.03■□□□□ 0.96
VPS16-203ENST00000380469 CCDC27Q2M243 656 aa21.03■□□□□ 0.96
VPS16-203ENST00000380469 IQSEC2Q5JU85 1478 aa21.03■□□□□ 0.96
VPS16-203ENST00000380469 ANKRD36BQ8N2N9 1353 aa21.03■□□□□ 0.96
VPS16-203ENST00000380469 NUTM2DQ5VT03 806 aaPredicted RBP21.02■□□□□ 0.96
VPS16-203ENST00000380469 MAPK8IP3Q9UPT6 1336 aa21.01■□□□□ 0.95
VPS16-203ENST00000380469 SLC4A3P48751 1232 aa21■□□□□ 0.95
VPS16-203ENST00000380469 NCBP3Q53F19 620 aaKnown RBP21■□□□□ 0.95
VPS16-203ENST00000380469 OSCARQ8IYS5 282 aa21■□□□□ 0.95
VPS16-203ENST00000380469 MYH16Q9H6N6 1097 aa20.99■□□□□ 0.95
VPS16-203ENST00000380469 PMFBP1Q8TBY8 1022 aa20.99■□□□□ 0.95
VPS16-203ENST00000380469 PIK3C2BO00750 1634 aa20.98■□□□□ 0.95
VPS16-203ENST00000380469 CABP2Q9NPB3 220 aa20.98■□□□□ 0.95
VPS16-203ENST00000380469 TULP4Q9NRJ4 1543 aa20.98■□□□□ 0.95
VPS16-203ENST00000380469 ARHGEF28Q8N1W1 1705 aaKnown RBP20.98■□□□□ 0.95
VPS16-203ENST00000380469 RAPGEF3O95398 923 aa20.98■□□□□ 0.95
VPS16-203ENST00000380469 U2AF1L5P0DN76 240 aaPredicted RBP20.98■□□□□ 0.95
VPS16-203ENST00000380469 U2AF1Q01081 240 aaKnown RBP eCLIP20.98■□□□□ 0.95
VPS16-203ENST00000380469 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
VPS16-203ENST00000380469 SIGLEC1Q9BZZ2 1709 aa20.98■□□□□ 0.95
VPS16-203ENST00000380469 NEO1Q92859 1461 aa20.97■□□□□ 0.95
VPS16-203ENST00000380469 NFKBIBQ15653 356 aa20.94■□□□□ 0.94
VPS16-203ENST00000380469 ARHGAP31Q2M1Z3 1444 aa20.94■□□□□ 0.94
VPS16-203ENST00000380469 IDI1Q13907 227 aa20.94■□□□□ 0.94
VPS16-203ENST00000380469 SAFB2Q14151 953 aaKnown RBP eCLIP20.94■□□□□ 0.94
VPS16-203ENST00000380469 SLC52A1Q9NWF4 448 aa20.94■□□□□ 0.94
VPS16-203ENST00000380469 ZFYVE9O95405 1425 aa20.93■□□□□ 0.94
VPS16-203ENST00000380469 SRPK2P78362 688 aaKnown RBP20.92■□□□□ 0.94
VPS16-203ENST00000380469 STK26Q9P289 416 aa20.92■□□□□ 0.94
VPS16-203ENST00000380469 VIRMAQ69YN4 1812 aaKnown RBP20.92■□□□□ 0.94
VPS16-203ENST00000380469 BCL2L13Q9BXK5 485 aa20.91■□□□□ 0.94
VPS16-203ENST00000380469 DIP2CQ9Y2E4 1556 aa20.91■□□□□ 0.94
VPS16-203ENST00000380469 RLBP1P12271 317 aa20.9■□□□□ 0.94
VPS16-203ENST00000380469 RWDD1Q9H446 243 aaPredicted RBP20.9■□□□□ 0.94
VPS16-203ENST00000380469 ABCC11Q96J66 1382 aa20.89■□□□□ 0.94
VPS16-203ENST00000380469 CT47B1P0C2W7 299 aaPredicted RBP20.89■□□□□ 0.94
VPS16-203ENST00000380469 PCDHB15Q9Y5E8 787 aa20.89■□□□□ 0.94
VPS16-203ENST00000380469 A0A1W2PP64 1363 aa20.89■□□□□ 0.93
VPS16-203ENST00000380469 TERF2IPQ9NYB0 399 aa20.88■□□□□ 0.93
VPS16-203ENST00000380469 U2SURPO15042 1029 aaKnown RBP20.88■□□□□ 0.93
VPS16-203ENST00000380469 TNNQ9UQP3 1299 aa20.88■□□□□ 0.93
VPS16-203ENST00000380469 ADGRB2O60241 1585 aa20.87■□□□□ 0.93
VPS16-203ENST00000380469 ZKSCAN2Q63HK3 967 aa20.87■□□□□ 0.93
VPS16-203ENST00000380469 ATAD2Q6PL18 1390 aa20.86■□□□□ 0.93
VPS16-203ENST00000380469 GGNBP2Q9H3C7 697 aa20.86■□□□□ 0.93
VPS16-203ENST00000380469 FTSJ3Q8IY81 847 aaKnown RBP20.86■□□□□ 0.93
VPS16-203ENST00000380469 POGKQ9P215 609 aa20.86■□□□□ 0.93
VPS16-203ENST00000380469 USP19O94966 1318 aa20.85■□□□□ 0.93
VPS16-203ENST00000380469 MVPQ14764 893 aaKnown RBP20.85■□□□□ 0.93
VPS16-203ENST00000380469 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
VPS16-203ENST00000380469 GSE1Q14687 1217 aa20.84■□□□□ 0.93
VPS16-203ENST00000380469 BECN1Q14457 450 aa20.84■□□□□ 0.93
VPS16-203ENST00000380469 DZIP1LQ8IYY4 767 aaKnown RBP20.84■□□□□ 0.93
VPS16-203ENST00000380469 PLEKHF1Q96S99 279 aa20.84■□□□□ 0.93
VPS16-203ENST00000380469 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
VPS16-203ENST00000380469 PDZRN3Q9UPQ7 1066 aa20.84■□□□□ 0.93
VPS16-203ENST00000380469 TMPOP42166 694 aaKnown RBP20.83■□□□□ 0.93
VPS16-203ENST00000380469 MINK1Q8N4C8 1332 aaPredicted RBP20.83■□□□□ 0.92
VPS16-203ENST00000380469 SEC24BO95487 1268 aa20.83■□□□□ 0.92
VPS16-203ENST00000380469 PRAM1Q96QH2 718 aa20.83■□□□□ 0.92
VPS16-203ENST00000380469 UPF2Q9HAU5 1272 aaKnown RBP20.83■□□□□ 0.92
VPS16-203ENST00000380469 TSR2Q969E8 191 aaKnown RBP20.82■□□□□ 0.92
VPS16-203ENST00000380469 FYB1O15117 783 aa20.82■□□□□ 0.92
VPS16-203ENST00000380469 PNNQ9H307 717 aaKnown RBP20.82■□□□□ 0.92
VPS16-203ENST00000380469 RICTORQ6R327 1708 aa20.81■□□□□ 0.92
VPS16-203ENST00000380469 HDGFL2Q7Z4V5 671 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms