RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 DNAJC2Q99543 621 aaKnown RBP8.24□□□□□ -1.09
RIPK1-202ENST00000380409 CARD11Q9BXL7 1154 aa8.24□□□□□ -1.09
RIPK1-202ENST00000380409 GEMIN8Q9NWZ8 242 aaKnown RBP8.24□□□□□ -1.09
RIPK1-202ENST00000380409 PARD3Q8TEW0 1356 aa8.23□□□□□ -1.09
RIPK1-202ENST00000380409 ZKSCAN5Q9Y2L8 839 aa8.23□□□□□ -1.09
RIPK1-202ENST00000380409 UHRF1BP1LA0JNW5 1464 aa8.23□□□□□ -1.09
RIPK1-202ENST00000380409 TCOF1Q13428 1488 aaKnown RBP8.23□□□□□ -1.09
RIPK1-202ENST00000380409 CSPP1Q1MSJ5 1256 aa8.23□□□□□ -1.09
RIPK1-202ENST00000380409 CLEC17AQ6ZS10 378 aa8.23□□□□□ -1.09
RIPK1-202ENST00000380409 CHMP5Q9NZZ3 219 aa8.23□□□□□ -1.09
RIPK1-202ENST00000380409 IQGAP2Q13576 1575 aa8.23□□□□□ -1.09
RIPK1-202ENST00000380409 PLIN1O60240 522 aa8.22□□□□□ -1.09
RIPK1-202ENST00000380409 RBM25P49756 843 aaKnown RBP8.22□□□□□ -1.09
RIPK1-202ENST00000380409 CUL7Q14999 1698 aa8.22□□□□□ -1.09
RIPK1-202ENST00000380409 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
RIPK1-202ENST00000380409 ZNF592Q92610 1267 aa8.22□□□□□ -1.09
RIPK1-202ENST00000380409 CC2D1BQ5T0F9 858 aaKnown RBP8.22□□□□□ -1.09
RIPK1-202ENST00000380409 KIF15Q9NS87 1388 aa8.21□□□□□ -1.09
RIPK1-202ENST00000380409 MSNP26038 577 aaKnown RBP8.21□□□□□ -1.09
RIPK1-202ENST00000380409 NBPF8Q3BBV2 869 aa8.21□□□□□ -1.09
RIPK1-202ENST00000380409 ANKRD7Q92527 254 aa8.21□□□□□ -1.09
RIPK1-202ENST00000380409 TSPOAP1O95153 1857 aa8.21□□□□□ -1.09
RIPK1-202ENST00000380409 XPCQ01831 940 aaPredicted RBP8.21□□□□□ -1.1
RIPK1-202ENST00000380409 CGNQ9P2M7 1197 aaKnown RBP8.21□□□□□ -1.1
RIPK1-202ENST00000380409 NPC1L1Q9UHC9 1359 aa8.21□□□□□ -1.1
RIPK1-202ENST00000380409 MYBBP1AQ9BQG0 1328 aaKnown RBP8.21□□□□□ -1.1
RIPK1-202ENST00000380409 YEATS2Q9ULM3 1422 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 ABCC2Q92887 1545 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 HMGN5P82970 282 aaKnown RBP8.2□□□□□ -1.1
RIPK1-202ENST00000380409 CBX1P83916 185 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 WDR43Q15061 677 aaKnown RBP eCLIP8.2□□□□□ -1.1
RIPK1-202ENST00000380409 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 ASXL2Q76L83 1435 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 NASPP49321 788 aaPredicted RBP8.2□□□□□ -1.1
RIPK1-202ENST00000380409 ZNF445P59923 1031 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 SUPT6HQ7KZ85 1726 aaKnown RBP8.2□□□□□ -1.1
RIPK1-202ENST00000380409 SLFN14P0C7P3 912 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 WWC1Q8IX03 1113 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.2□□□□□ -1.1
RIPK1-202ENST00000380409 FAM135AQ9P2D6 1515 aa8.2□□□□□ -1.1
RIPK1-202ENST00000380409 ZNF521Q96K83 1311 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 GABPB1Q06547 395 aaPredicted RBP8.19□□□□□ -1.1
RIPK1-202ENST00000380409 AFAP1Q8N556 730 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 NGEFQ8N5V2 710 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 SAMD9Q5K651 1589 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 RAD50Q92878 1312 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 AK9Q5TCS8 1911 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 PRIMPOLQ96LW4 560 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 ANKRD30BQ9BXX2 1392 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 RALGAPBQ86X10 1494 aa8.19□□□□□ -1.1
RIPK1-202ENST00000380409 JARID2Q92833 1246 aaPredicted RBP8.18□□□□□ -1.1
RIPK1-202ENST00000380409 EFCAB5A4FU69 1503 aa8.18□□□□□ -1.1
RIPK1-202ENST00000380409 UGGT2Q9NYU1 1516 aa8.18□□□□□ -1.1
RIPK1-202ENST00000380409 HNRNPMP52272 730 aaKnown RBP eCLIP8.18□□□□□ -1.13e-7■■■■□ 24.6
RIPK1-202ENST00000380409 RAB3GAP1Q15042 981 aa8.18□□□□□ -1.1
RIPK1-202ENST00000380409 DNTTIP2Q5QJE6 756 aaKnown RBP8.18□□□□□ -1.1
RIPK1-202ENST00000380409 L3MBTL2Q969R5 705 aa8.18□□□□□ -1.1
RIPK1-202ENST00000380409 UHRF1BP1Q6BDS2 1440 aa8.18□□□□□ -1.1
RIPK1-202ENST00000380409 CASKIN1Q8WXD9 1431 aa8.18□□□□□ -1.1
RIPK1-202ENST00000380409 MAPK8IP3Q9UPT6 1336 aa8.18□□□□□ -1.1
RIPK1-202ENST00000380409 SKOR2Q2VWA4 1001 aaPredicted RBP8.18□□□□□ -1.1
RIPK1-202ENST00000380409 DISP1Q96F81 1524 aa8.17□□□□□ -1.1
RIPK1-202ENST00000380409 GRIPAP1Q4V328 841 aa8.17□□□□□ -1.1
RIPK1-202ENST00000380409 FAM53CQ9NYF3 392 aa8.17□□□□□ -1.1
RIPK1-202ENST00000380409 ZNF644Q9H582 1327 aaPredicted RBP8.17□□□□□ -1.1
RIPK1-202ENST00000380409 LAMC1P11047 1609 aa8.17□□□□□ -1.1
RIPK1-202ENST00000380409 CLGNO14967 610 aa8.17□□□□□ -1.1
RIPK1-202ENST00000380409 STAG3Q9UJ98 1225 aa8.17□□□□□ -1.1
RIPK1-202ENST00000380409 SMC5Q8IY18 1101 aa8.16□□□□□ -1.1
RIPK1-202ENST00000380409 CDK13Q14004 1512 aaKnown RBP8.16□□□□□ -1.1
RIPK1-202ENST00000380409 CTIFO43310 598 aaKnown RBP8.16□□□□□ -1.1
RIPK1-202ENST00000380409 PTMSP20962 102 aa8.16□□□□□ -1.1
RIPK1-202ENST00000380409 PKD2Q13563 968 aa8.16□□□□□ -1.1
RIPK1-202ENST00000380409 TNPO1Q92973 898 aaKnown RBP8.16□□□□□ -1.1
RIPK1-202ENST00000380409 MPHOSPH9Q99550 1183 aa8.16□□□□□ -1.1
RIPK1-202ENST00000380409 ARID3AQ99856 593 aa8.16□□□□□ -1.1
RIPK1-202ENST00000380409 ESF1Q9H501 851 aaKnown RBP8.16□□□□□ -1.1
RIPK1-202ENST00000380409 AXDND1Q5T1B0 1012 aaPredicted RBP8.16□□□□□ -1.1
RIPK1-202ENST00000380409 GGT6Q6P531 493 aa8.16□□□□□ -1.1
RIPK1-202ENST00000380409 TICAM2Q86XR7 235 aa8.16□□□□□ -1.1
RIPK1-202ENST00000380409 CIZ1Q9ULV3 898 aaPredicted RBP8.16□□□□□ -1.1
RIPK1-202ENST00000380409 HDAC5Q9UQL6 1122 aa8.16□□□□□ -1.1
RIPK1-202ENST00000380409 FEZ1Q99689 392 aa8.15□□□□□ -1.1
RIPK1-202ENST00000380409 ARHGEF12Q9NZN5 1544 aa8.15□□□□□ -1.1
RIPK1-202ENST00000380409 ZNF622Q969S3 477 aaKnown RBP eCLIP8.15□□□□□ -1.1
RIPK1-202ENST00000380409 IGHDP01880 384 aa8.15□□□□□ -1.11
RIPK1-202ENST00000380409 KLHL40Q2TBA0 621 aa8.15□□□□□ -1.11
RIPK1-202ENST00000380409 ITSN2Q9NZM3 1697 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
RIPK1-202ENST00000380409 RALBP1Q15311 655 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 EFCC1Q9HA90 598 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 BCL2L12Q9HB09 334 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 SPINK5Q9NQ38 1064 aaPredicted RBP8.14□□□□□ -1.11
RIPK1-202ENST00000380409 SPTLC3Q9NUV7 552 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 CD109Q6YHK3 1445 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 USP47Q96K76 1375 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 E9PSI1 815 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 KCNJ4P48050 445 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms