RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 SLC24A1O60721 1099 aa38.55■■■■□ 3.76
TRAPPC10-202ENST00000380221 MINK1Q8N4C8 1332 aaPredicted RBP38.54■■■■□ 3.76
TRAPPC10-202ENST00000380221 PTCH1Q13635 1447 aa38.53■■■■□ 3.76
TRAPPC10-202ENST00000380221 TULP4Q9NRJ4 1543 aa38.48■■■■□ 3.75
TRAPPC10-202ENST00000380221 CDCA8Q53HL2 280 aa38.47■■■■□ 3.75
TRAPPC10-202ENST00000380221 EVC2Q86UK5 1308 aa38.45■■■■□ 3.75
TRAPPC10-202ENST00000380221 NWD1Q149M9 1564 aa38.44■■■■□ 3.74
TRAPPC10-202ENST00000380221 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.43■■■■□ 3.74
TRAPPC10-202ENST00000380221 CABP2Q9NPB3 220 aa38.36■■■■□ 3.73
TRAPPC10-202ENST00000380221 STRCP1A6NGW2 1772 aa38.36■■■■□ 3.73
TRAPPC10-202ENST00000380221 MIER1Q8N108 512 aa38.36■■■■□ 3.73
TRAPPC10-202ENST00000380221 CDK19Q9BWU1 502 aa38.36■■■■□ 3.73
TRAPPC10-202ENST00000380221 AEBP2Q6ZN18 517 aaPredicted RBP38.35■■■■□ 3.73
TRAPPC10-202ENST00000380221 SRPK2P78362 688 aaKnown RBP38.34■■■■□ 3.73
TRAPPC10-202ENST00000380221 RBM33Q96EV2 1170 aaKnown RBP38.34■■■■□ 3.73
TRAPPC10-202ENST00000380221 DMRT2Q9Y5R5 561 aa38.34■■■■□ 3.73
TRAPPC10-202ENST00000380221 WASLO00401 505 aaPredicted RBP38.31■■■■□ 3.72
TRAPPC10-202ENST00000380221 ADGRB2O60241 1585 aa38.31■■■■□ 3.72
TRAPPC10-202ENST00000380221 MYOM1P52179 1685 aa38.31■■■■□ 3.72
TRAPPC10-202ENST00000380221 NKTRP30414 1462 aaKnown RBP38.3■■■■□ 3.72
TRAPPC10-202ENST00000380221 PUS7Q96PZ0 661 aaKnown RBP38.3■■■■□ 3.72
TRAPPC10-202ENST00000380221 PROSER2Q86WR7 435 aaPredicted RBP38.28■■■■□ 3.72
TRAPPC10-202ENST00000380221 ZNF335Q9H4Z2 1342 aaPredicted RBP38.25■■■■□ 3.71
TRAPPC10-202ENST00000380221 NALCNQ8IZF0 1738 aa38.25■■■■□ 3.71
TRAPPC10-202ENST00000380221 TMC1Q8TDI8 760 aa38.22■■■■□ 3.71
TRAPPC10-202ENST00000380221 ATAD2Q6PL18 1390 aa38.21■■■■□ 3.71
TRAPPC10-202ENST00000380221 PANK3Q9H999 370 aa38.2■■■■□ 3.71
TRAPPC10-202ENST00000380221 SLC12A5Q9H2X9 1139 aa38.19■■■■□ 3.7
TRAPPC10-202ENST00000380221 ADGRL3Q9HAR2 1447 aa38.18■■■■□ 3.7
TRAPPC10-202ENST00000380221 C14orf37Q86TY3 774 aa38.17■■■■□ 3.7
TRAPPC10-202ENST00000380221 TMEM94Q12767 1356 aa38.15■■■■□ 3.7
TRAPPC10-202ENST00000380221 NUTM2FA1L443 756 aa38.15■■■■□ 3.7
TRAPPC10-202ENST00000380221 NUDT16Q96DE0 195 aaKnown RBP38.15■■■■□ 3.7
TRAPPC10-202ENST00000380221 PRR36Q9H6K5 1346 aa38.13■■■■□ 3.7
TRAPPC10-202ENST00000380221 ATP7BP35670 1465 aa38.12■■■■□ 3.69
TRAPPC10-202ENST00000380221 CDC42BPGQ6DT37 1551 aa38.12■■■■□ 3.69
TRAPPC10-202ENST00000380221 CABP1Q9NZU7 370 aa38.1■■■■□ 3.69
TRAPPC10-202ENST00000380221 FMN2Q9NZ56 1722 aa38.09■■■■□ 3.69
TRAPPC10-202ENST00000380221 NINLQ9Y2I6 1382 aa38.09■■■■□ 3.69
TRAPPC10-202ENST00000380221 USP32Q8NFA0 1604 aa38.08■■■■□ 3.69
TRAPPC10-202ENST00000380221 LRRC7Q96NW7 1537 aa38.08■■■■□ 3.69
TRAPPC10-202ENST00000380221 PER1O15534 1290 aaPredicted RBP38.07■■■■□ 3.68
TRAPPC10-202ENST00000380221 CCDC61Q9Y6R9 512 aa38.07■■■■□ 3.68
TRAPPC10-202ENST00000380221 PPIP5K1Q6PFW1 1433 aa38.07■■■■□ 3.68
TRAPPC10-202ENST00000380221 NCOA3Q9Y6Q9 1424 aa38.07■■■■□ 3.68
TRAPPC10-202ENST00000380221 XIRP1Q702N8 1843 aaKnown RBP38.06■■■■□ 3.68
TRAPPC10-202ENST00000380221 C19orf44Q9H6X5 657 aa38.04■■■■□ 3.68
TRAPPC10-202ENST00000380221 RGPD8O14715 1765 aaPredicted RBP38.04■■■■□ 3.68
TRAPPC10-202ENST00000380221 CARD14Q9BXL6 1004 aa38.03■■■■□ 3.68
TRAPPC10-202ENST00000380221 TOPAZ1Q8N9V7 1692 aa38.02■■■■□ 3.68
TRAPPC10-202ENST00000380221 ANKRD36BQ8N2N9 1353 aa38.02■■■■□ 3.68
TRAPPC10-202ENST00000380221 CD163L1Q9NR16 1453 aa38.01■■■■□ 3.67
TRAPPC10-202ENST00000380221 ANKARQ7Z5J8 1434 aa38■■■■□ 3.67
TRAPPC10-202ENST00000380221 A0A1W2PP64 1363 aa37.99■■■■□ 3.67
TRAPPC10-202ENST00000380221 ANP32CO43423 234 aa37.98■■■■□ 3.67
TRAPPC10-202ENST00000380221 CNGB1Q14028 1251 aaPredicted RBP37.98■■■■□ 3.67
TRAPPC10-202ENST00000380221 TERF2IPQ9NYB0 399 aa37.98■■■■□ 3.67
TRAPPC10-202ENST00000380221 KNSTRNQ9Y448 316 aa37.98■■■■□ 3.67
TRAPPC10-202ENST00000380221 ITSN1Q15811 1721 aa37.97■■■■□ 3.67
TRAPPC10-202ENST00000380221 HDGFL2Q7Z4V5 671 aaPredicted RBP37.94■■■■□ 3.66
TRAPPC10-202ENST00000380221 MSH6P52701 1360 aa37.94■■■■□ 3.66
TRAPPC10-202ENST00000380221 NSD3Q9BZ95 1437 aa37.93■■■■□ 3.66
TRAPPC10-202ENST00000380221 PLEKHG3A1L390 1219 aa37.92■■■■□ 3.66
TRAPPC10-202ENST00000380221 ATF3P18847 181 aa37.92■■■■□ 3.66
TRAPPC10-202ENST00000380221 DCCP43146 1447 aa37.92■■■■□ 3.66
TRAPPC10-202ENST00000380221 PMFBP1Q8TBY8 1022 aa37.91■■■■□ 3.66
TRAPPC10-202ENST00000380221 LTBP4Q8N2S1 1624 aa37.9■■■■□ 3.66
TRAPPC10-202ENST00000380221 CPSF1Q10570 1443 aaKnown RBP37.9■■■■□ 3.66
TRAPPC10-202ENST00000380221 ACEP12821 1306 aa37.88■■■■□ 3.65
TRAPPC10-202ENST00000380221 AMER1Q5JTC6 1135 aaPredicted RBP37.88■■■■□ 3.65
TRAPPC10-202ENST00000380221 PRKRIP1Q9H875 184 aaPredicted RBP37.88■■■■□ 3.65
TRAPPC10-202ENST00000380221 CC2D1BQ5T0F9 858 aaKnown RBP37.87■■■■□ 3.65
TRAPPC10-202ENST00000380221 CADPS2Q86UW7 1296 aa37.86■■■■□ 3.65
TRAPPC10-202ENST00000380221 AKAP12Q02952 1782 aa37.86■■■■□ 3.65
TRAPPC10-202ENST00000380221 KTN1Q86UP2 1357 aaKnown RBP37.85■■■■□ 3.65
TRAPPC10-202ENST00000380221 ESCO1Q5FWF5 840 aa37.84■■■■□ 3.65
TRAPPC10-202ENST00000380221 MST1RQ04912 1400 aa37.84■■■■□ 3.65
TRAPPC10-202ENST00000380221 C1orf167Q5SNV9 1468 aa37.83■■■■□ 3.65
TRAPPC10-202ENST00000380221 ZNF692Q9BU19 519 aaPredicted RBP37.82■■■■□ 3.64
TRAPPC10-202ENST00000380221 MON2Q7Z3U7 1717 aa37.81■■■■□ 3.64
TRAPPC10-202ENST00000380221 NGDNQ8NEJ9 315 aaKnown RBP37.81■■■■□ 3.64
TRAPPC10-202ENST00000380221 ORAI2Q96SN7 254 aa37.81■■■■□ 3.64
TRAPPC10-202ENST00000380221 PHF8Q9UPP1 1060 aa37.81■■■■□ 3.64
TRAPPC10-202ENST00000380221 POLR3AO14802 1390 aaPredicted RBP37.81■■■■□ 3.64
TRAPPC10-202ENST00000380221 CGNL1Q0VF96 1302 aa37.78■■■■□ 3.64
TRAPPC10-202ENST00000380221 NPC1L1Q9UHC9 1359 aa37.77■■■■□ 3.64
TRAPPC10-202ENST00000380221 EDC4Q6P2E9 1401 aaKnown RBP37.76■■■■□ 3.64
TRAPPC10-202ENST00000380221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.75■■■■□ 3.63
TRAPPC10-202ENST00000380221 USP6P35125 1406 aa37.74■■■■□ 3.63
TRAPPC10-202ENST00000380221 PARD3Q8TEW0 1356 aa37.73■■■■□ 3.63
TRAPPC10-202ENST00000380221 RALBP1Q15311 655 aa37.72■■■■□ 3.63
TRAPPC10-202ENST00000380221 NRKQ7Z2Y5 1582 aa37.7■■■■□ 3.63
TRAPPC10-202ENST00000380221 CCER2I3L3R5 266 aa37.69■■■■□ 3.62
TRAPPC10-202ENST00000380221 FYB1O15117 783 aa37.69■■■■□ 3.62
TRAPPC10-202ENST00000380221 SLAIN2Q9P270 581 aa37.68■■■■□ 3.62
TRAPPC10-202ENST00000380221 KIF20BQ96Q89 1820 aa37.67■■■■□ 3.62
TRAPPC10-202ENST00000380221 GGNBP2Q9H3C7 697 aa37.67■■■■□ 3.62
TRAPPC10-202ENST00000380221 KIF1AQ12756 1690 aa37.67■■■■□ 3.62
TRAPPC10-202ENST00000380221 TTC21BQ7Z4L5 1316 aa37.66■■■■□ 3.62
TRAPPC10-202ENST00000380221 SSH2Q76I76 1423 aa37.66■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms