RNA–Protein interactions for RNA: ENST00000379995.1

C9orf72-201, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 3

Gene C9orf72, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-201ENST00000379995 KIF1BO60333 1816 aa14.11□□□□□ -0.15
C9orf72-201ENST00000379995 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
C9orf72-201ENST00000379995 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
C9orf72-201ENST00000379995 UPF1Q92900 1129 aaKnown RBP eCLIP14.1□□□□□ -0.15
C9orf72-201ENST00000379995 NALCNQ8IZF0 1738 aa14.1□□□□□ -0.15
C9orf72-201ENST00000379995 LRPPRCP42704 1394 aaKnown RBP14.09□□□□□ -0.15
C9orf72-201ENST00000379995 NHSL1Q5SYE7 1610 aa14.09□□□□□ -0.15
C9orf72-201ENST00000379995 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
C9orf72-201ENST00000379995 QTRT2Q9H974 415 aaKnown RBP14.09□□□□□ -0.15
C9orf72-201ENST00000379995 ABCC11Q96J66 1382 aa14.09□□□□□ -0.15
C9orf72-201ENST00000379995 SETD1AO15047 1707 aaKnown RBP14.07□□□□□ -0.16
C9orf72-201ENST00000379995 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
C9orf72-201ENST00000379995 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
C9orf72-201ENST00000379995 NPHP3Q7Z494 1330 aa14.07□□□□□ -0.16
C9orf72-201ENST00000379995 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
C9orf72-201ENST00000379995 PLEKHH1Q9ULM0 1364 aa14.07□□□□□ -0.16
C9orf72-201ENST00000379995 TECPR2O15040 1411 aa14.07□□□□□ -0.16
C9orf72-201ENST00000379995 FOXO3O43524 673 aa14.06□□□□□ -0.16
C9orf72-201ENST00000379995 PIK3C2GO75747 1445 aa14.06□□□□□ -0.16
C9orf72-201ENST00000379995 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
C9orf72-201ENST00000379995 XPCQ01831 940 aaPredicted RBP14.05□□□□□ -0.16
C9orf72-201ENST00000379995 C14orf93Q9H972 538 aaKnown RBP14.05□□□□□ -0.16
C9orf72-201ENST00000379995 USP21Q9UK80 565 aa14.04□□□□□ -0.16
C9orf72-201ENST00000379995 PPLO60437 1756 aa14.04□□□□□ -0.16
C9orf72-201ENST00000379995 CFAP70Q5T0N1 1121 aa14.03□□□□□ -0.16
C9orf72-201ENST00000379995 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
C9orf72-201ENST00000379995 SIRT1Q96EB6 747 aa14.03□□□□□ -0.16
C9orf72-201ENST00000379995 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
C9orf72-201ENST00000379995 CDC42BPGQ6DT37 1551 aa14.02□□□□□ -0.16
C9orf72-201ENST00000379995 RGS12O14924 1447 aa14.02□□□□□ -0.16
C9orf72-201ENST00000379995 RAB3GAP2Q9H2M9 1393 aa14.02□□□□□ -0.17
C9orf72-201ENST00000379995 LAMC1P11047 1609 aa14.01□□□□□ -0.17
C9orf72-201ENST00000379995 TRPC5Q9UL62 973 aaPredicted RBP14.01□□□□□ -0.17
C9orf72-201ENST00000379995 PXDNQ92626 1479 aa14□□□□□ -0.17
C9orf72-201ENST00000379995 DHX57Q6P158 1386 aaKnown RBP14□□□□□ -0.17
C9orf72-201ENST00000379995 MYOM2P54296 1465 aa13.99□□□□□ -0.17
C9orf72-201ENST00000379995 PRAM1Q96QH2 718 aa13.99□□□□□ -0.17
C9orf72-201ENST00000379995 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
C9orf72-201ENST00000379995 SAFB2Q14151 953 aaKnown RBP eCLIP13.98□□□□□ -0.17
C9orf72-201ENST00000379995 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
C9orf72-201ENST00000379995 SPATA31A3Q5VYP0 1347 aa13.97□□□□□ -0.17
C9orf72-201ENST00000379995 PHF8Q9UPP1 1060 aa13.97□□□□□ -0.17
C9orf72-201ENST00000379995 POGKQ9P215 609 aa13.96□□□□□ -0.17
C9orf72-201ENST00000379995 ATRNO75882 1429 aa13.96□□□□□ -0.18
C9orf72-201ENST00000379995 BCL9LQ86UU0 1499 aa13.94□□□□□ -0.18
C9orf72-201ENST00000379995 PSME1Q06323 249 aa13.94□□□□□ -0.18
C9orf72-201ENST00000379995 KDM2AQ9Y2K7 1162 aa13.94□□□□□ -0.18
C9orf72-201ENST00000379995 IFT172Q9UG01 1749 aa13.93□□□□□ -0.18
C9orf72-201ENST00000379995 GJD4Q96KN9 370 aaPredicted RBP13.93□□□□□ -0.18
C9orf72-201ENST00000379995 TRAK1Q9UPV9 953 aa13.93□□□□□ -0.18
C9orf72-201ENST00000379995 ATAD2Q6PL18 1390 aa13.93□□□□□ -0.18
C9orf72-201ENST00000379995 COL22A1Q8NFW1 1626 aaPredicted RBP13.93□□□□□ -0.18
C9orf72-201ENST00000379995 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
C9orf72-201ENST00000379995 DCAF11Q8TEB1 546 aa13.92□□□□□ -0.18
C9orf72-201ENST00000379995 KNDC1Q76NI1 1749 aa13.91□□□□□ -0.18
C9orf72-201ENST00000379995 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
C9orf72-201ENST00000379995 HRCP23327 699 aa13.91□□□□□ -0.18
C9orf72-201ENST00000379995 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
C9orf72-201ENST00000379995 LMOD2Q6P5Q4 547 aa13.91□□□□□ -0.18
C9orf72-201ENST00000379995 PMFBP1Q8TBY8 1022 aa13.91□□□□□ -0.18
C9orf72-201ENST00000379995 CABLES1Q8TDN4 633 aa13.91□□□□□ -0.18
C9orf72-201ENST00000379995 HIRIP3Q9BW71 556 aaPredicted RBP13.91□□□□□ -0.18
C9orf72-201ENST00000379995 SBNO1A3KN83 1393 aa13.9□□□□□ -0.18
C9orf72-201ENST00000379995 TNS3Q68CZ2 1445 aa13.9□□□□□ -0.19
C9orf72-201ENST00000379995 STAC3Q96MF2 364 aa13.89□□□□□ -0.19
C9orf72-201ENST00000379995 DLC1Q96QB1 1528 aa13.89□□□□□ -0.19
C9orf72-201ENST00000379995 MINK1Q8N4C8 1332 aaPredicted RBP13.89□□□□□ -0.19
C9orf72-201ENST00000379995 FMN2Q9NZ56 1722 aa13.88□□□□□ -0.19
C9orf72-201ENST00000379995 SLIT2O94813 1529 aa13.88□□□□□ -0.19
C9orf72-201ENST00000379995 ANKARQ7Z5J8 1434 aa13.88□□□□□ -0.19
C9orf72-201ENST00000379995 ADGRB1O14514 1584 aa13.88□□□□□ -0.19
C9orf72-201ENST00000379995 WASLO00401 505 aaPredicted RBP13.87□□□□□ -0.19
C9orf72-201ENST00000379995 PRR36Q9H6K5 1346 aa13.87□□□□□ -0.19
C9orf72-201ENST00000379995 ARHGEF10O15013 1369 aa13.86□□□□□ -0.19
C9orf72-201ENST00000379995 KIF1AQ12756 1690 aa13.86□□□□□ -0.19
C9orf72-201ENST00000379995 RALGAPBQ86X10 1494 aa13.86□□□□□ -0.19
C9orf72-201ENST00000379995 VPS72Q15906 364 aa13.85□□□□□ -0.19
C9orf72-201ENST00000379995 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
C9orf72-201ENST00000379995 EIF3AQ14152 1382 aaKnown RBP13.84□□□□□ -0.19
C9orf72-201ENST00000379995 FAM83GA6ND36 823 aa13.84□□□□□ -0.19
C9orf72-201ENST00000379995 CCDC125Q86Z20 511 aa13.84□□□□□ -0.19
C9orf72-201ENST00000379995 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.19
C9orf72-201ENST00000379995 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
C9orf72-201ENST00000379995 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.2
C9orf72-201ENST00000379995 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
C9orf72-201ENST00000379995 ADGRB2O60241 1585 aa13.81□□□□□ -0.2
C9orf72-201ENST00000379995 USP32Q8NFA0 1604 aa13.81□□□□□ -0.2
C9orf72-201ENST00000379995 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
C9orf72-201ENST00000379995 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
C9orf72-201ENST00000379995 NUDT16Q96DE0 195 aaKnown RBP13.8□□□□□ -0.2
C9orf72-201ENST00000379995 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
C9orf72-201ENST00000379995 TULP4Q9NRJ4 1543 aa13.8□□□□□ -0.2
C9orf72-201ENST00000379995 GLI3P10071 1580 aa13.79□□□□□ -0.2
C9orf72-201ENST00000379995 BTG4Q9NY30 223 aa13.79□□□□□ -0.2
C9orf72-201ENST00000379995 SRCAPQ6ZRS2 3230 aa13.78□□□□□ -0.2
C9orf72-201ENST00000379995 CDK19Q9BWU1 502 aa13.78□□□□□ -0.2
C9orf72-201ENST00000379995 BLMP54132 1417 aaPredicted RBP13.77□□□□□ -0.21
C9orf72-201ENST00000379995 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.21
C9orf72-201ENST00000379995 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
C9orf72-201ENST00000379995 A0A0G2JS52 829 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms