RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 EVC2Q86UK5 1308 aa14.21□□□□□ -0.14
SMAD9-202ENST00000379826 TRAK2O60296 914 aa14.2□□□□□ -0.14
SMAD9-202ENST00000379826 PLCB2Q00722 1185 aa14.2□□□□□ -0.14
SMAD9-202ENST00000379826 C1orf115Q9H7X2 142 aa14.2□□□□□ -0.14
SMAD9-202ENST00000379826 ADGBQ8N7X0 1667 aa14.2□□□□□ -0.14
SMAD9-202ENST00000379826 NOB1Q9ULX3 412 aaKnown RBP14.2□□□□□ -0.14
SMAD9-202ENST00000379826 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
SMAD9-202ENST00000379826 ATF3P18847 181 aa14.19□□□□□ -0.14
SMAD9-202ENST00000379826 ARHGEF12Q9NZN5 1544 aa14.18□□□□□ -0.14
SMAD9-202ENST00000379826 SEC24BO95487 1268 aa14.18□□□□□ -0.14
SMAD9-202ENST00000379826 NGEFQ8N5V2 710 aa14.18□□□□□ -0.14
SMAD9-202ENST00000379826 TERF2IPQ9NYB0 399 aa14.18□□□□□ -0.14
SMAD9-202ENST00000379826 TNNQ9UQP3 1299 aa14.18□□□□□ -0.14
SMAD9-202ENST00000379826 NSD3Q9BZ95 1437 aa14.18□□□□□ -0.14
SMAD9-202ENST00000379826 KDM2BQ8NHM5 1336 aa14.17□□□□□ -0.14
SMAD9-202ENST00000379826 ATP10BO94823 1461 aa14.17□□□□□ -0.14
SMAD9-202ENST00000379826 RARSP54136 660 aaKnown RBP14.17□□□□□ -0.14
SMAD9-202ENST00000379826 HSP90AA2PQ14568 343 aaPredicted RBP14.17□□□□□ -0.14
SMAD9-202ENST00000379826 MVPQ14764 893 aaKnown RBP14.17□□□□□ -0.14
SMAD9-202ENST00000379826 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
SMAD9-202ENST00000379826 ZMYM4Q5VZL5 1548 aa14.16□□□□□ -0.14
SMAD9-202ENST00000379826 DDX49Q9Y6V7 483 aaKnown RBP14.16□□□□□ -0.14
SMAD9-202ENST00000379826 HMOX1P09601 288 aa14.16□□□□□ -0.14
SMAD9-202ENST00000379826 SYCP2Q9BX26 1530 aa14.16□□□□□ -0.14
SMAD9-202ENST00000379826 POGZQ7Z3K3 1410 aa14.16□□□□□ -0.14
SMAD9-202ENST00000379826 COL17A1Q9UMD9 1497 aaPredicted RBP14.16□□□□□ -0.14
SMAD9-202ENST00000379826 TMX4Q9H1E5 349 aaPredicted RBP14.16□□□□□ -0.14
SMAD9-202ENST00000379826 TBC1D2Q9BYX2 928 aa14.15□□□□□ -0.14
SMAD9-202ENST00000379826 DIAPH1O60610 1272 aaKnown RBP14.15□□□□□ -0.14
SMAD9-202ENST00000379826 EVA1CP58658 441 aa14.15□□□□□ -0.14
SMAD9-202ENST00000379826 ADGRL2O95490 1459 aa14.15□□□□□ -0.14
SMAD9-202ENST00000379826 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.15
SMAD9-202ENST00000379826 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.15
SMAD9-202ENST00000379826 PTMSP20962 102 aa14.15□□□□□ -0.15
SMAD9-202ENST00000379826 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.15
SMAD9-202ENST00000379826 ADGRF5Q8IZF2 1346 aa14.14□□□□□ -0.15
SMAD9-202ENST00000379826 A2MP01023 1474 aa14.14□□□□□ -0.15
SMAD9-202ENST00000379826 BLMP54132 1417 aaPredicted RBP14.14□□□□□ -0.15
SMAD9-202ENST00000379826 NINLQ9Y2I6 1382 aa14.14□□□□□ -0.15
SMAD9-202ENST00000379826 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
SMAD9-202ENST00000379826 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
SMAD9-202ENST00000379826 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
SMAD9-202ENST00000379826 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
SMAD9-202ENST00000379826 MBD5Q9P267 1494 aa14.13□□□□□ -0.15
SMAD9-202ENST00000379826 SCAF11Q99590 1463 aaKnown RBP14.13□□□□□ -0.15
SMAD9-202ENST00000379826 WDR63Q8IWG1 891 aa14.12□□□□□ -0.15
SMAD9-202ENST00000379826 SCAPERQ9BY12 1400 aa14.12□□□□□ -0.15
SMAD9-202ENST00000379826 ASXL1Q8IXJ9 1541 aa14.12□□□□□ -0.15
SMAD9-202ENST00000379826 VSIG10Q8N0Z9 540 aa14.12□□□□□ -0.15
SMAD9-202ENST00000379826 MCM4P33991 863 aa14.12□□□□□ -0.15
SMAD9-202ENST00000379826 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
SMAD9-202ENST00000379826 MCTP1Q6DN14 999 aa14.12□□□□□ -0.15
SMAD9-202ENST00000379826 MRE11P49959 708 aa14.11□□□□□ -0.15
SMAD9-202ENST00000379826 PCDHB15Q9Y5E8 787 aa14.11□□□□□ -0.15
SMAD9-202ENST00000379826 AAMPQ13685 434 aa14.11□□□□□ -0.15
SMAD9-202ENST00000379826 STAC3Q96MF2 364 aa14.11□□□□□ -0.15
SMAD9-202ENST00000379826 SKOR2Q2VWA4 1001 aaPredicted RBP14.1□□□□□ -0.15
SMAD9-202ENST00000379826 SHANK2Q9UPX8 1470 aa14.1□□□□□ -0.15
SMAD9-202ENST00000379826 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
SMAD9-202ENST00000379826 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
SMAD9-202ENST00000379826 KIF16BQ96L93 1317 aa14.09□□□□□ -0.15
SMAD9-202ENST00000379826 TRIM6-TRIM34B2RNG4 842 aa14.09□□□□□ -0.15
SMAD9-202ENST00000379826 GPRASP1Q5JY77 1395 aa14.09□□□□□ -0.15
SMAD9-202ENST00000379826 NUTM2FA1L443 756 aa14.08□□□□□ -0.15
SMAD9-202ENST00000379826 RLBP1P12271 317 aa14.08□□□□□ -0.15
SMAD9-202ENST00000379826 GRPEL1Q9HAV7 217 aa14.08□□□□□ -0.16
SMAD9-202ENST00000379826 MCCP23508 829 aa14.08□□□□□ -0.16
SMAD9-202ENST00000379826 ATF7IPQ6VMQ6 1270 aa14.08□□□□□ -0.16
SMAD9-202ENST00000379826 EIF2AK4Q9P2K8 1649 aaKnown RBP14.08□□□□□ -0.16
SMAD9-202ENST00000379826 UBAP1LF5GYI3 381 aa14.07□□□□□ -0.16
SMAD9-202ENST00000379826 TBC1D32Q96NH3 1257 aa14.07□□□□□ -0.16
SMAD9-202ENST00000379826 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
SMAD9-202ENST00000379826 ST18O60284 1047 aa14.06□□□□□ -0.16
SMAD9-202ENST00000379826 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
SMAD9-202ENST00000379826 SSH1Q8WYL5 1049 aa14.06□□□□□ -0.16
SMAD9-202ENST00000379826 RTF1Q92541 710 aaKnown RBP14.06□□□□□ -0.16
SMAD9-202ENST00000379826 PRKAR2BP31323 418 aa14.05□□□□□ -0.16
SMAD9-202ENST00000379826 CARD14Q9BXL6 1004 aa14.05□□□□□ -0.16
SMAD9-202ENST00000379826 CHD1LQ86WJ1 897 aa14.05□□□□□ -0.16
SMAD9-202ENST00000379826 PROSER2Q86WR7 435 aaPredicted RBP14.05□□□□□ -0.16
SMAD9-202ENST00000379826 CFAP44Q96MT7 982 aa14.04□□□□□ -0.16
SMAD9-202ENST00000379826 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
SMAD9-202ENST00000379826 RILPL2Q969X0 211 aa14.04□□□□□ -0.16
SMAD9-202ENST00000379826 PPP1R1BQ9UD71 204 aaPredicted RBP14.04□□□□□ -0.16
SMAD9-202ENST00000379826 TRIM27P14373 513 aa14.04□□□□□ -0.16
SMAD9-202ENST00000379826 NASPP49321 788 aaPredicted RBP14.04□□□□□ -0.16
SMAD9-202ENST00000379826 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
SMAD9-202ENST00000379826 CDC45O75419 566 aa14.03□□□□□ -0.16
SMAD9-202ENST00000379826 TMPOP42166 694 aaKnown RBP14.03□□□□□ -0.16
SMAD9-202ENST00000379826 CEP170Q5SW79 1584 aa14.03□□□□□ -0.16
SMAD9-202ENST00000379826 CAVIN1Q6NZI2 390 aaKnown RBP14.03□□□□□ -0.16
SMAD9-202ENST00000379826 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
SMAD9-202ENST00000379826 NUP160Q12769 1436 aa14.03□□□□□ -0.16
SMAD9-202ENST00000379826 MAGI2Q86UL8 1455 aa14.02□□□□□ -0.16
SMAD9-202ENST00000379826 NECTIN2Q92692 538 aa14.02□□□□□ -0.17
SMAD9-202ENST00000379826 DUOX2Q9NRD8 1548 aa14.02□□□□□ -0.17
SMAD9-202ENST00000379826 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
SMAD9-202ENST00000379826 NOS1P29475 1434 aa14.01□□□□□ -0.17
SMAD9-202ENST00000379826 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
SMAD9-202ENST00000379826 POLR1AO95602 1720 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms