RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 SPAG9O60271 1321 aaKnown RBP12.02□□□□□ -0.49
NHLRC3-202ENST00000379600 KIF1BO60333 1816 aa12.01□□□□□ -0.49
NHLRC3-202ENST00000379600 TBC1D2Q9BYX2 928 aa12.01□□□□□ -0.49
NHLRC3-202ENST00000379600 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
NHLRC3-202ENST00000379600 NSD3Q9BZ95 1437 aa12□□□□□ -0.49
NHLRC3-202ENST00000379600 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
NHLRC3-202ENST00000379600 BCL2L13Q9BXK5 485 aa12□□□□□ -0.49
NHLRC3-202ENST00000379600 ZMYM3Q14202 1370 aa12□□□□□ -0.49
NHLRC3-202ENST00000379600 NEUROD2Q15784 382 aa12□□□□□ -0.49
NHLRC3-202ENST00000379600 RRAGDQ9NQL2 400 aaPredicted RBP11.99□□□□□ -0.49
NHLRC3-202ENST00000379600 SBNO2Q9Y2G9 1366 aa11.99□□□□□ -0.49
NHLRC3-202ENST00000379600 ATP7AQ04656 1500 aa11.99□□□□□ -0.49
NHLRC3-202ENST00000379600 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
NHLRC3-202ENST00000379600 QRICH2Q9H0J4 1663 aa11.99□□□□□ -0.49
NHLRC3-202ENST00000379600 BECN1Q14457 450 aa11.99□□□□□ -0.49
NHLRC3-202ENST00000379600 USP32Q8NFA0 1604 aa11.98□□□□□ -0.49
NHLRC3-202ENST00000379600 ZNF518AQ6AHZ1 1483 aa11.98□□□□□ -0.49
NHLRC3-202ENST00000379600 RUNDC1Q96C34 613 aa11.98□□□□□ -0.49
NHLRC3-202ENST00000379600 PPRC1Q5VV67 1664 aaKnown RBP11.98□□□□□ -0.49
NHLRC3-202ENST00000379600 TNNT2P45379 298 aaPredicted RBP11.98□□□□□ -0.49
NHLRC3-202ENST00000379600 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
NHLRC3-202ENST00000379600 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
NHLRC3-202ENST00000379600 ARAP3Q8WWN8 1544 aa11.97□□□□□ -0.49
NHLRC3-202ENST00000379600 SETBP1Q9Y6X0 1596 aa11.97□□□□□ -0.49
NHLRC3-202ENST00000379600 ADGRB2O60241 1585 aa11.97□□□□□ -0.49
NHLRC3-202ENST00000379600 KANK1Q14678 1352 aa11.97□□□□□ -0.49
NHLRC3-202ENST00000379600 UHRF1BP1LA0JNW5 1464 aa11.96□□□□□ -0.49
NHLRC3-202ENST00000379600 SLC12A5Q9H2X9 1139 aa11.96□□□□□ -0.49
NHLRC3-202ENST00000379600 ABCA9Q8IUA7 1624 aa11.96□□□□□ -0.49
NHLRC3-202ENST00000379600 ADGRB1O14514 1584 aa11.96□□□□□ -0.5
NHLRC3-202ENST00000379600 WDR63Q8IWG1 891 aa11.96□□□□□ -0.5
NHLRC3-202ENST00000379600 ADGRB3O60242 1522 aa11.95□□□□□ -0.5
NHLRC3-202ENST00000379600 MORC1Q86VD1 984 aa11.95□□□□□ -0.5
NHLRC3-202ENST00000379600 AAMPQ13685 434 aa11.95□□□□□ -0.5
NHLRC3-202ENST00000379600 PPLO60437 1756 aa11.95□□□□□ -0.5
NHLRC3-202ENST00000379600 FSD2A1L4K1 749 aa11.94□□□□□ -0.5
NHLRC3-202ENST00000379600 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
NHLRC3-202ENST00000379600 NOS1P29475 1434 aa11.94□□□□□ -0.5
NHLRC3-202ENST00000379600 KIF3BO15066 747 aa11.94□□□□□ -0.5
NHLRC3-202ENST00000379600 XRCC6P12956 609 aaKnown RBP eCLIP11.94□□□□□ -0.5
NHLRC3-202ENST00000379600 SPRYD3Q8NCJ5 442 aa11.94□□□□□ -0.5
NHLRC3-202ENST00000379600 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
NHLRC3-202ENST00000379600 MTHFSP49914 203 aa11.93□□□□□ -0.5
NHLRC3-202ENST00000379600 MVPQ14764 893 aaKnown RBP11.93□□□□□ -0.5
NHLRC3-202ENST00000379600 UBE2Q2Q8WVN8 375 aa11.93□□□□□ -0.5
NHLRC3-202ENST00000379600 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
NHLRC3-202ENST00000379600 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
NHLRC3-202ENST00000379600 RWDD1Q9H446 243 aaPredicted RBP11.92□□□□□ -0.5
NHLRC3-202ENST00000379600 MCM4P33991 863 aa11.92□□□□□ -0.5
NHLRC3-202ENST00000379600 PANK2Q9BZ23 570 aa11.92□□□□□ -0.5
NHLRC3-202ENST00000379600 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
NHLRC3-202ENST00000379600 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
NHLRC3-202ENST00000379600 KIDINS220Q9ULH0 1771 aa11.91□□□□□ -0.5
NHLRC3-202ENST00000379600 L1TD1Q5T7N2 865 aaKnown RBP11.91□□□□□ -0.5
NHLRC3-202ENST00000379600 UPF2Q9HAU5 1272 aaKnown RBP11.91□□□□□ -0.5
NHLRC3-202ENST00000379600 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
NHLRC3-202ENST00000379600 FANCAO15360 1455 aa11.91□□□□□ -0.5
NHLRC3-202ENST00000379600 TULP4Q9NRJ4 1543 aa11.9□□□□□ -0.5
NHLRC3-202ENST00000379600 TSR2Q969E8 191 aaKnown RBP11.9□□□□□ -0.5
NHLRC3-202ENST00000379600 LMTK2Q8IWU2 1503 aa11.9□□□□□ -0.5
NHLRC3-202ENST00000379600 ADGRL1O94910 1474 aa11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 ARXQ96QS3 562 aa11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 C22orf23Q9BZE7 217 aa11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 CFAP65Q6ZU64 1925 aaKnown RBP11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 ARHGEF28Q8N1W1 1705 aaKnown RBP11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 NCOA3Q9Y6Q9 1424 aa11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 DDIT3P35638 169 aa11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 GZF1Q9H116 711 aaPredicted RBP11.89□□□□□ -0.51
NHLRC3-202ENST00000379600 TRIM27P14373 513 aa11.88□□□□□ -0.51
NHLRC3-202ENST00000379600 ZKSCAN2Q63HK3 967 aa11.88□□□□□ -0.51
NHLRC3-202ENST00000379600 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
NHLRC3-202ENST00000379600 C14orf93Q9H972 538 aaKnown RBP11.88□□□□□ -0.51
NHLRC3-202ENST00000379600 MFAP1P55081 439 aaKnown RBP11.88□□□□□ -0.51
NHLRC3-202ENST00000379600 COL3A1P02461 1466 aaPredicted RBP11.87□□□□□ -0.51
NHLRC3-202ENST00000379600 HDAC1Q13547 482 aaPredicted RBP11.87□□□□□ -0.51
NHLRC3-202ENST00000379600 PLEKHF1Q96S99 279 aa11.87□□□□□ -0.51
NHLRC3-202ENST00000379600 MYH16Q9H6N6 1097 aa11.87□□□□□ -0.51
NHLRC3-202ENST00000379600 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
NHLRC3-202ENST00000379600 GLI2P10070 1586 aa11.87□□□□□ -0.51
NHLRC3-202ENST00000379600 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
NHLRC3-202ENST00000379600 GOLGA6L3A6NEY3 463 aa11.86□□□□□ -0.51
NHLRC3-202ENST00000379600 EXOSC9Q06265 439 aaKnown RBP11.86□□□□□ -0.51
NHLRC3-202ENST00000379600 SSH1Q8WYL5 1049 aa11.86□□□□□ -0.51
NHLRC3-202ENST00000379600 TRAK2O60296 914 aa11.86□□□□□ -0.51
NHLRC3-202ENST00000379600 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
NHLRC3-202ENST00000379600 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
NHLRC3-202ENST00000379600 CHMP5Q9NZZ3 219 aa11.86□□□□□ -0.51
NHLRC3-202ENST00000379600 SMC5Q8IY18 1101 aa11.85□□□□□ -0.51
NHLRC3-202ENST00000379600 NPATQ14207 1427 aa11.85□□□□□ -0.51
NHLRC3-202ENST00000379600 FTSJ3Q8IY81 847 aaKnown RBP11.85□□□□□ -0.51
NHLRC3-202ENST00000379600 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
NHLRC3-202ENST00000379600 CAMSAP1Q5T5Y3 1602 aa11.84□□□□□ -0.51
NHLRC3-202ENST00000379600 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
NHLRC3-202ENST00000379600 SIGLEC1Q9BZZ2 1709 aa11.84□□□□□ -0.51
NHLRC3-202ENST00000379600 CFAP53Q96M91 514 aa11.84□□□□□ -0.51
NHLRC3-202ENST00000379600 FRMPD1Q5SYB0 1578 aa11.84□□□□□ -0.51
NHLRC3-202ENST00000379600 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
NHLRC3-202ENST00000379600 NOB1Q9ULX3 412 aaKnown RBP11.83□□□□□ -0.52
NHLRC3-202ENST00000379600 ATF7IPQ6VMQ6 1270 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms