RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 KIF1BO60333 1816 aa14.24□□□□□ -0.13
NEDD9-201ENST00000379433 MROH2AA6NES4 1674 aa14.24□□□□□ -0.13
NEDD9-201ENST00000379433 DIP2CQ9Y2E4 1556 aa14.24□□□□□ -0.13
NEDD9-201ENST00000379433 SOX12O15370 315 aa14.23□□□□□ -0.13
NEDD9-201ENST00000379433 PPP4R2Q9NY27 417 aa14.23□□□□□ -0.13
NEDD9-201ENST00000379433 RCAN3Q9UKA8 241 aa14.23□□□□□ -0.13
NEDD9-201ENST00000379433 VWDEQ8N2E2 1590 aa14.23□□□□□ -0.13
NEDD9-201ENST00000379433 GLIPR1L2Q4G1C9 344 aa14.23□□□□□ -0.13
NEDD9-201ENST00000379433 EVC2Q86UK5 1308 aa14.22□□□□□ -0.13
NEDD9-201ENST00000379433 U2SURPO15042 1029 aaKnown RBP14.22□□□□□ -0.13
NEDD9-201ENST00000379433 NSD3Q9BZ95 1437 aa14.22□□□□□ -0.13
NEDD9-201ENST00000379433 NCKAP5LQ9HCH0 1330 aa14.22□□□□□ -0.13
NEDD9-201ENST00000379433 ERICH6BQ5W0A0 696 aa14.21□□□□□ -0.13
NEDD9-201ENST00000379433 CFAP74Q9C0B2 1584 aa14.21□□□□□ -0.13
NEDD9-201ENST00000379433 MTHFSP49914 203 aa14.21□□□□□ -0.13
NEDD9-201ENST00000379433 SLC26A8Q96RN1 970 aa14.21□□□□□ -0.13
NEDD9-201ENST00000379433 TMEM132AQ24JP5 1023 aa14.21□□□□□ -0.14
NEDD9-201ENST00000379433 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
NEDD9-201ENST00000379433 ERVK-7P63135 1459 aa14.2□□□□□ -0.14
NEDD9-201ENST00000379433 CABP1Q9NZU7 370 aa14.2□□□□□ -0.14
NEDD9-201ENST00000379433 MAP3K4Q9Y6R4 1608 aa14.2□□□□□ -0.14
NEDD9-201ENST00000379433 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
NEDD9-201ENST00000379433 RPGRIP1LQ68CZ1 1315 aa14.19□□□□□ -0.14
NEDD9-201ENST00000379433 ZMYND15Q9H091 742 aa14.19□□□□□ -0.14
NEDD9-201ENST00000379433 CDK19Q9BWU1 502 aa14.18□□□□□ -0.14
NEDD9-201ENST00000379433 LRPPRCP42704 1394 aaKnown RBP14.18□□□□□ -0.14
NEDD9-201ENST00000379433 PIK3C2GO75747 1445 aa14.18□□□□□ -0.14
NEDD9-201ENST00000379433 U2AF1L5P0DN76 240 aaPredicted RBP14.18□□□□□ -0.14
NEDD9-201ENST00000379433 U2AF1Q01081 240 aaKnown RBP eCLIP14.18□□□□□ -0.141e-6■■□□□ 11.6
NEDD9-201ENST00000379433 SKAP1Q86WV1 359 aa14.18□□□□□ -0.14
NEDD9-201ENST00000379433 RBM33Q96EV2 1170 aaKnown RBP14.17□□□□□ -0.14
NEDD9-201ENST00000379433 DIP2BQ9P265 1576 aa14.17□□□□□ -0.14
NEDD9-201ENST00000379433 SIGLEC1Q9BZZ2 1709 aa14.17□□□□□ -0.14
NEDD9-201ENST00000379433 RBM19Q9Y4C8 960 aaKnown RBP14.17□□□□□ -0.14
NEDD9-201ENST00000379433 SMG6Q86US8 1419 aaKnown RBP14.16□□□□□ -0.14
NEDD9-201ENST00000379433 CGNL1Q0VF96 1302 aa14.15□□□□□ -0.14
NEDD9-201ENST00000379433 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
NEDD9-201ENST00000379433 SPINK5Q9NQ38 1064 aaPredicted RBP14.15□□□□□ -0.14
NEDD9-201ENST00000379433 ADGRB3O60242 1522 aa14.15□□□□□ -0.14
NEDD9-201ENST00000379433 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
NEDD9-201ENST00000379433 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
NEDD9-201ENST00000379433 ZMYM3Q14202 1370 aa14.15□□□□□ -0.14
NEDD9-201ENST00000379433 SYNMO15061 1565 aa14.15□□□□□ -0.14
NEDD9-201ENST00000379433 RRP1P56182 461 aaKnown RBP14.15□□□□□ -0.14
NEDD9-201ENST00000379433 C20orf194Q5TEA3 1177 aa14.15□□□□□ -0.14
NEDD9-201ENST00000379433 MYOM2P54296 1465 aa14.14□□□□□ -0.15
NEDD9-201ENST00000379433 BCL2L13Q9BXK5 485 aa14.14□□□□□ -0.15
NEDD9-201ENST00000379433 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
NEDD9-201ENST00000379433 ASXL1Q8IXJ9 1541 aa14.13□□□□□ -0.15
NEDD9-201ENST00000379433 GOLGA2Q08379 1002 aa14.13□□□□□ -0.15
NEDD9-201ENST00000379433 LMTK2Q8IWU2 1503 aa14.13□□□□□ -0.15
NEDD9-201ENST00000379433 IQGAP1P46940 1657 aa14.12□□□□□ -0.15
NEDD9-201ENST00000379433 ZRANB1Q9UGI0 708 aa14.12□□□□□ -0.15
NEDD9-201ENST00000379433 VSIG10Q8N0Z9 540 aa14.12□□□□□ -0.15
NEDD9-201ENST00000379433 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
NEDD9-201ENST00000379433 CANXP27824 592 aaKnown RBP14.11□□□□□ -0.15
NEDD9-201ENST00000379433 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
NEDD9-201ENST00000379433 CRBNQ96SW2 442 aa14.1□□□□□ -0.15
NEDD9-201ENST00000379433 TERF2IPQ9NYB0 399 aa14.1□□□□□ -0.15
NEDD9-201ENST00000379433 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-201ENST00000379433 RSPH6AQ9H0K4 717 aa14.1□□□□□ -0.15
NEDD9-201ENST00000379433 MYO5BQ9ULV0 1848 aa14.09□□□□□ -0.15
NEDD9-201ENST00000379433 BCAR3O75815 825 aa14.09□□□□□ -0.15
NEDD9-201ENST00000379433 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
NEDD9-201ENST00000379433 A0A1W2PP64 1363 aa14.08□□□□□ -0.15
NEDD9-201ENST00000379433 YTHDC2Q9H6S0 1430 aaKnown RBP14.08□□□□□ -0.15
NEDD9-201ENST00000379433 RIMS2Q9UQ26 1411 aa14.08□□□□□ -0.15
NEDD9-201ENST00000379433 KDM5AP29375 1690 aaKnown RBP14.08□□□□□ -0.15
NEDD9-201ENST00000379433 PLCB2Q00722 1185 aa14.08□□□□□ -0.16
NEDD9-201ENST00000379433 LAS1LQ9Y4W2 734 aaKnown RBP14.08□□□□□ -0.16
NEDD9-201ENST00000379433 LAMC1P11047 1609 aa14.08□□□□□ -0.16
NEDD9-201ENST00000379433 LTKP29376 864 aa14.07□□□□□ -0.16
NEDD9-201ENST00000379433 METP08581 1390 aa14.07□□□□□ -0.16
NEDD9-201ENST00000379433 FYB1O15117 783 aa14.07□□□□□ -0.16
NEDD9-201ENST00000379433 HMOX1P09601 288 aa14.07□□□□□ -0.16
NEDD9-201ENST00000379433 NEXMIFQ5QGS0 1516 aa14.07□□□□□ -0.16
NEDD9-201ENST00000379433 PIK3C2BO00750 1634 aa14.07□□□□□ -0.16
NEDD9-201ENST00000379433 IGSF3O75054 1194 aa14.07□□□□□ -0.16
NEDD9-201ENST00000379433 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
NEDD9-201ENST00000379433 CLTCQ00610 1675 aaKnown RBP14.06□□□□□ -0.16
NEDD9-201ENST00000379433 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
NEDD9-201ENST00000379433 DUSP27Q5VZP5 1158 aa14.06□□□□□ -0.16
NEDD9-201ENST00000379433 NME9Q86XW9 330 aa14.06□□□□□ -0.16
NEDD9-201ENST00000379433 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
NEDD9-201ENST00000379433 RRS1Q15050 365 aaKnown RBP14.05□□□□□ -0.16
NEDD9-201ENST00000379433 CLUAP1Q96AJ1 413 aa14.05□□□□□ -0.16
NEDD9-201ENST00000379433 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
NEDD9-201ENST00000379433 ADGRB1O14514 1584 aa14.05□□□□□ -0.16
NEDD9-201ENST00000379433 GLI2P10070 1586 aa14.05□□□□□ -0.16
NEDD9-201ENST00000379433 PPLO60437 1756 aa14.05□□□□□ -0.16
NEDD9-201ENST00000379433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.05□□□□□ -0.16
NEDD9-201ENST00000379433 ARHGAP31Q2M1Z3 1444 aa14.05□□□□□ -0.16
NEDD9-201ENST00000379433 NRXN1Q9ULB1 1477 aa14.04□□□□□ -0.16
NEDD9-201ENST00000379433 NUTM2GQ5VZR2 741 aa14.04□□□□□ -0.16
NEDD9-201ENST00000379433 TNRQ92752 1358 aa14.03□□□□□ -0.16
NEDD9-201ENST00000379433 QRICH2Q9H0J4 1663 aa14.03□□□□□ -0.16
NEDD9-201ENST00000379433 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
NEDD9-201ENST00000379433 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
NEDD9-201ENST00000379433 ZBTB7CA1YPR0 619 aa14.02□□□□□ -0.16
NEDD9-201ENST00000379433 WWC1Q8IX03 1113 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms