RNA–Protein interactions for RNA: ENST00000379384.9

TM6SF1-203, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 5

Gene TM6SF1, Length 1,808 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-203ENST00000379384 PRAM1Q96QH2 718 aa25.74■■□□□ 1.71
TM6SF1-203ENST00000379384 ATF3P18847 181 aa25.73■■□□□ 1.71
TM6SF1-203ENST00000379384 SAFB2Q14151 953 aaKnown RBP eCLIP25.72■■□□□ 1.71
TM6SF1-203ENST00000379384 ILDR1Q86SU0 546 aaPredicted RBP25.72■■□□□ 1.71
TM6SF1-203ENST00000379384 POGKQ9P215 609 aa25.72■■□□□ 1.71
TM6SF1-203ENST00000379384 DCCP43146 1447 aa25.72■■□□□ 1.71
TM6SF1-203ENST00000379384 CADPS2Q86UW7 1296 aa25.71■■□□□ 1.71
TM6SF1-203ENST00000379384 RALGAPBQ86X10 1494 aa25.7■■□□□ 1.7
TM6SF1-203ENST00000379384 CDC42BPGQ6DT37 1551 aa25.68■■□□□ 1.7
TM6SF1-203ENST00000379384 SLAIN2Q9P270 581 aa25.67■■□□□ 1.7
TM6SF1-203ENST00000379384 ROBO1Q9Y6N7 1651 aa25.67■■□□□ 1.7
TM6SF1-203ENST00000379384 GPRASP1Q5JY77 1395 aa25.65■■□□□ 1.7
TM6SF1-203ENST00000379384 MST1RQ04912 1400 aa25.63■■□□□ 1.69
TM6SF1-203ENST00000379384 CARD11Q9BXL7 1154 aa25.63■■□□□ 1.69
TM6SF1-203ENST00000379384 QRICH2Q9H0J4 1663 aa25.63■■□□□ 1.69
TM6SF1-203ENST00000379384 FMN2Q9NZ56 1722 aa25.62■■□□□ 1.69
TM6SF1-203ENST00000379384 ADGRB2O60241 1585 aa25.61■■□□□ 1.69
TM6SF1-203ENST00000379384 MINK1Q8N4C8 1332 aaPredicted RBP25.61■■□□□ 1.69
TM6SF1-203ENST00000379384 HIRIP3Q9BW71 556 aaPredicted RBP25.61■■□□□ 1.69
TM6SF1-203ENST00000379384 RGPD8O14715 1765 aaPredicted RBP25.61■■□□□ 1.69
TM6SF1-203ENST00000379384 CENPJQ9HC77 1338 aaPredicted RBP25.58■■□□□ 1.69
TM6SF1-203ENST00000379384 NUTM2FA1L443 756 aa25.57■■□□□ 1.68
TM6SF1-203ENST00000379384 EIF3AQ14152 1382 aaKnown RBP25.57■■□□□ 1.68
TM6SF1-203ENST00000379384 C1orf167Q5SNV9 1468 aa25.57■■□□□ 1.68
TM6SF1-203ENST00000379384 BRINP3Q76B58 766 aa25.53■■□□□ 1.68
TM6SF1-203ENST00000379384 HSPA1LP34931 641 aa25.52■■□□□ 1.68
TM6SF1-203ENST00000379384 PHLPP1O60346 1717 aa25.51■■□□□ 1.67
TM6SF1-203ENST00000379384 USP32Q8NFA0 1604 aa25.51■■□□□ 1.67
TM6SF1-203ENST00000379384 WASLO00401 505 aaPredicted RBP25.51■■□□□ 1.67
TM6SF1-203ENST00000379384 ORAI2Q96SN7 254 aa25.51■■□□□ 1.67
TM6SF1-203ENST00000379384 ESCO1Q5FWF5 840 aa25.49■■□□□ 1.67
TM6SF1-203ENST00000379384 NHSL1Q5SYE7 1610 aa25.48■■□□□ 1.67
TM6SF1-203ENST00000379384 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
TM6SF1-203ENST00000379384 AHDC1Q5TGY3 1603 aaPredicted RBP25.46■■□□□ 1.67
TM6SF1-203ENST00000379384 ITSN1Q15811 1721 aa25.45■■□□□ 1.67
TM6SF1-203ENST00000379384 CDK19Q9BWU1 502 aa25.45■■□□□ 1.66
TM6SF1-203ENST00000379384 ANKARQ7Z5J8 1434 aa25.45■■□□□ 1.66
TM6SF1-203ENST00000379384 USP47Q96K76 1375 aa25.45■■□□□ 1.66
TM6SF1-203ENST00000379384 KIF1AQ12756 1690 aa25.44■■□□□ 1.66
TM6SF1-203ENST00000379384 DDX17Q92841 729 aaKnown RBP25.43■■□□□ 1.66
TM6SF1-203ENST00000379384 PRR36Q9H6K5 1346 aa25.43■■□□□ 1.66
TM6SF1-203ENST00000379384 COL16A1Q07092 1604 aaPredicted RBP25.42■■□□□ 1.66
TM6SF1-203ENST00000379384 ATP7BP35670 1465 aa25.42■■□□□ 1.66
TM6SF1-203ENST00000379384 ST20-MTHFSA0A0A6YYL1 179 aa25.42■■□□□ 1.66
TM6SF1-203ENST00000379384 SRPK2P78362 688 aaKnown RBP25.4■■□□□ 1.66
TM6SF1-203ENST00000379384 SBNO2Q9Y2G9 1366 aa25.4■■□□□ 1.66
TM6SF1-203ENST00000379384 EVC2Q86UK5 1308 aa25.4■■□□□ 1.66
TM6SF1-203ENST00000379384 TOPAZ1Q8N9V7 1692 aa25.39■■□□□ 1.66
TM6SF1-203ENST00000379384 NUDT16Q96DE0 195 aaKnown RBP25.39■■□□□ 1.65
TM6SF1-203ENST00000379384 CABP2Q9NPB3 220 aa25.39■■□□□ 1.65
TM6SF1-203ENST00000379384 PHF8Q9UPP1 1060 aa25.38■■□□□ 1.65
TM6SF1-203ENST00000379384 FOXO3O43524 673 aa25.37■■□□□ 1.65
TM6SF1-203ENST00000379384 PMFBP1Q8TBY8 1022 aa25.37■■□□□ 1.65
TM6SF1-203ENST00000379384 NPHP3Q7Z494 1330 aa25.35■■□□□ 1.65
TM6SF1-203ENST00000379384 TESK2Q96S53 571 aa25.34■■□□□ 1.65
TM6SF1-203ENST00000379384 XPCQ01831 940 aaPredicted RBP25.33■■□□□ 1.64
TM6SF1-203ENST00000379384 CCDC61Q9Y6R9 512 aa25.33■■□□□ 1.64
TM6SF1-203ENST00000379384 PXDNQ92626 1479 aa25.32■■□□□ 1.64
TM6SF1-203ENST00000379384 SOS2Q07890 1332 aaPredicted RBP25.31■■□□□ 1.64
TM6SF1-203ENST00000379384 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
TM6SF1-203ENST00000379384 PPIP5K1Q6PFW1 1433 aa25.3■■□□□ 1.64
TM6SF1-203ENST00000379384 SHPRHQ149N8 1683 aa25.29■■□□□ 1.64
TM6SF1-203ENST00000379384 EIF4G2P78344 907 aaKnown RBP eCLIP25.28■■□□□ 1.64
TM6SF1-203ENST00000379384 NGDNQ8NEJ9 315 aaKnown RBP25.28■■□□□ 1.64
TM6SF1-203ENST00000379384 LRRC59Q96AG4 307 aaKnown RBP25.28■■□□□ 1.64
TM6SF1-203ENST00000379384 PSME1Q06323 249 aa25.27■■□□□ 1.64
TM6SF1-203ENST00000379384 JCADQ9P266 1359 aa25.27■■□□□ 1.64
TM6SF1-203ENST00000379384 SLC24A1O60721 1099 aa25.26■■□□□ 1.63
TM6SF1-203ENST00000379384 KRT28Q7Z3Y7 464 aa25.26■■□□□ 1.63
TM6SF1-203ENST00000379384 ATAD2Q6PL18 1390 aa25.25■■□□□ 1.63
TM6SF1-203ENST00000379384 HSPA5P11021 654 aaKnown RBP25.25■■□□□ 1.63
TM6SF1-203ENST00000379384 DISP3Q9P2K9 1392 aa25.25■■□□□ 1.63
TM6SF1-203ENST00000379384 TMF1P82094 1093 aa25.24■■□□□ 1.63
TM6SF1-203ENST00000379384 CABP1Q9NZU7 370 aa25.24■■□□□ 1.63
TM6SF1-203ENST00000379384 ACEP12821 1306 aa25.24■■□□□ 1.63
TM6SF1-203ENST00000379384 TRPM3Q9HCF6 1732 aaPredicted RBP25.24■■□□□ 1.63
TM6SF1-203ENST00000379384 PLEKHG3A1L390 1219 aa25.23■■□□□ 1.63
TM6SF1-203ENST00000379384 POLR3AO14802 1390 aaPredicted RBP25.23■■□□□ 1.63
TM6SF1-203ENST00000379384 AKAP12Q02952 1782 aa25.21■■□□□ 1.63
TM6SF1-203ENST00000379384 PNPLA6Q8IY17 1366 aa25.19■■□□□ 1.62
TM6SF1-203ENST00000379384 TMC1Q8TDI8 760 aa25.18■■□□□ 1.62
TM6SF1-203ENST00000379384 SPATA31A3Q5VYP0 1347 aa25.18■■□□□ 1.62
TM6SF1-203ENST00000379384 TNS3Q68CZ2 1445 aa25.17■■□□□ 1.62
TM6SF1-203ENST00000379384 PUS7Q96PZ0 661 aaKnown RBP25.17■■□□□ 1.62
TM6SF1-203ENST00000379384 ALS2Q96Q42 1657 aa25.17■■□□□ 1.62
TM6SF1-203ENST00000379384 SBNO1A3KN83 1393 aa25.17■■□□□ 1.62
TM6SF1-203ENST00000379384 COL22A1Q8NFW1 1626 aaPredicted RBP25.17■■□□□ 1.62
TM6SF1-203ENST00000379384 PAK3O75914 559 aaPredicted RBP25.16■■□□□ 1.62
TM6SF1-203ENST00000379384 LMOD2Q6P5Q4 547 aa25.16■■□□□ 1.62
TM6SF1-203ENST00000379384 MED1Q15648 1581 aaPredicted RBP25.15■■□□□ 1.62
TM6SF1-203ENST00000379384 CDCA8Q53HL2 280 aa25.14■■□□□ 1.62
TM6SF1-203ENST00000379384 SPATA31A6Q5VVP1 1343 aa25.14■■□□□ 1.62
TM6SF1-203ENST00000379384 MON2Q7Z3U7 1717 aa25.14■■□□□ 1.61
TM6SF1-203ENST00000379384 SLC12A5Q9H2X9 1139 aa25.14■■□□□ 1.61
TM6SF1-203ENST00000379384 USP6P35125 1406 aa25.12■■□□□ 1.61
TM6SF1-203ENST00000379384 MYOM1P52179 1685 aa25.12■■□□□ 1.61
TM6SF1-203ENST00000379384 NUTM2BA6NNL0 878 aaPredicted RBP25.12■■□□□ 1.61
TM6SF1-203ENST00000379384 NUTM2EB1AL46 878 aaPredicted RBP25.12■■□□□ 1.61
TM6SF1-203ENST00000379384 NUTM2AQ8IVF1 878 aaPredicted RBP25.12■■□□□ 1.61
TM6SF1-203ENST00000379384 LRP6O75581 1613 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms