RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 ARHGEF28Q8N1W1 1705 aaKnown RBP34.47■■■■□ 3.11
SDHAF1-201ENST00000378887 ATF3P18847 181 aa34.47■■■■□ 3.11
SDHAF1-201ENST00000378887 BRINP3Q76B58 766 aa34.46■■■■□ 3.11
SDHAF1-201ENST00000378887 PHLPP1O60346 1717 aa34.45■■■■□ 3.11
SDHAF1-201ENST00000378887 FMN2Q9NZ56 1722 aa34.44■■■■□ 3.1
SDHAF1-201ENST00000378887 ADGRB2O60241 1585 aa34.44■■■■□ 3.1
SDHAF1-201ENST00000378887 TRPM1Q7Z4N2 1603 aa34.41■■■■□ 3.1
SDHAF1-201ENST00000378887 MED1Q15648 1581 aaPredicted RBP34.38■■■■□ 3.09
SDHAF1-201ENST00000378887 NBPF1Q3BBV0 1214 aa34.37■■■■□ 3.09
SDHAF1-201ENST00000378887 PRAM1Q96QH2 718 aa34.36■■■■□ 3.09
SDHAF1-201ENST00000378887 USP32Q8NFA0 1604 aa34.35■■■■□ 3.09
SDHAF1-201ENST00000378887 NEUROD1Q13562 356 aa34.34■■■■□ 3.09
SDHAF1-201ENST00000378887 PCGF6Q9BYE7 350 aa34.33■■■■□ 3.09
SDHAF1-201ENST00000378887 TRAK1Q9UPV9 953 aa34.31■■■■□ 3.08
SDHAF1-201ENST00000378887 ORAI2Q96SN7 254 aa34.3■■■■□ 3.08
SDHAF1-201ENST00000378887 RGPD8O14715 1765 aaPredicted RBP34.3■■■■□ 3.08
SDHAF1-201ENST00000378887 NBPF8Q3BBV2 869 aa34.29■■■■□ 3.08
SDHAF1-201ENST00000378887 SHPRHQ149N8 1683 aa34.28■■■■□ 3.08
SDHAF1-201ENST00000378887 DDX17Q92841 729 aaKnown RBP34.26■■■■□ 3.08
SDHAF1-201ENST00000378887 GPRASP1Q5JY77 1395 aa34.23■■■■□ 3.07
SDHAF1-201ENST00000378887 SAFB2Q14151 953 aaKnown RBP eCLIP34.22■■■■□ 3.07
SDHAF1-201ENST00000378887 PXDNQ92626 1479 aa34.21■■■■□ 3.07
SDHAF1-201ENST00000378887 SOS2Q07890 1332 aaPredicted RBP34.19■■■■□ 3.06
SDHAF1-201ENST00000378887 JCADQ9P266 1359 aa34.19■■■■□ 3.06
SDHAF1-201ENST00000378887 LRP6O75581 1613 aa34.19■■■■□ 3.06
SDHAF1-201ENST00000378887 KIF1AQ12756 1690 aa34.17■■■■□ 3.06
SDHAF1-201ENST00000378887 PRR36Q9H6K5 1346 aa34.17■■■■□ 3.06
SDHAF1-201ENST00000378887 ANKARQ7Z5J8 1434 aa34.16■■■■□ 3.06
SDHAF1-201ENST00000378887 TULP4Q9NRJ4 1543 aa34.15■■■■□ 3.06
SDHAF1-201ENST00000378887 RALGAPBQ86X10 1494 aa34.15■■■■□ 3.06
SDHAF1-201ENST00000378887 POGKQ9P215 609 aa34.15■■■■□ 3.06
SDHAF1-201ENST00000378887 NUTM2FA1L443 756 aa34.13■■■■□ 3.05
SDHAF1-201ENST00000378887 MINK1Q8N4C8 1332 aaPredicted RBP34.12■■■■□ 3.05
SDHAF1-201ENST00000378887 HIRIP3Q9BW71 556 aaPredicted RBP34.12■■■■□ 3.05
SDHAF1-201ENST00000378887 ATP7BP35670 1465 aa34.12■■■■□ 3.05
SDHAF1-201ENST00000378887 QRICH2Q9H0J4 1663 aa34.12■■■■□ 3.05
SDHAF1-201ENST00000378887 TONSLQ96HA7 1378 aa34.11■■■■□ 3.05
SDHAF1-201ENST00000378887 DISP3Q9P2K9 1392 aa34.11■■■■□ 3.05
SDHAF1-201ENST00000378887 TOPAZ1Q8N9V7 1692 aa34.1■■■■□ 3.05
SDHAF1-201ENST00000378887 PNPLA6Q8IY17 1366 aa34.1■■■■□ 3.05
SDHAF1-201ENST00000378887 ESCO1Q5FWF5 840 aa34.09■■■■□ 3.05
SDHAF1-201ENST00000378887 COL22A1Q8NFW1 1626 aaPredicted RBP34.08■■■■□ 3.05
SDHAF1-201ENST00000378887 CLSPNQ9HAW4 1339 aa34.08■■■■□ 3.05
SDHAF1-201ENST00000378887 WASLO00401 505 aaPredicted RBP34.08■■■■□ 3.05
SDHAF1-201ENST00000378887 RGS17Q9UGC6 210 aaPredicted RBP34.05■■■■□ 3.04
SDHAF1-201ENST00000378887 ROCK2O75116 1388 aaKnown RBP34.05■■■■□ 3.04
SDHAF1-201ENST00000378887 TRPM3Q9HCF6 1732 aaPredicted RBP34.02■■■■□ 3.04
SDHAF1-201ENST00000378887 FOXO3O43524 673 aa34.02■■■■□ 3.04
SDHAF1-201ENST00000378887 SPATA31A6Q5VVP1 1343 aa34.02■■■■□ 3.04
SDHAF1-201ENST00000378887 NPHP3Q7Z494 1330 aa34.02■■■■□ 3.04
SDHAF1-201ENST00000378887 ILDR2Q71H61 639 aa34■■■■□ 3.03
SDHAF1-201ENST00000378887 LRRC59Q96AG4 307 aaKnown RBP34■■■■□ 3.03
SDHAF1-201ENST00000378887 CENPJQ9HC77 1338 aaPredicted RBP34■■■■□ 3.03
SDHAF1-201ENST00000378887 PHF8Q9UPP1 1060 aa33.98■■■■□ 3.03
SDHAF1-201ENST00000378887 ITSN1Q15811 1721 aa33.98■■■■□ 3.03
SDHAF1-201ENST00000378887 EIF3AQ14152 1382 aaKnown RBP33.96■■■■□ 3.03
SDHAF1-201ENST00000378887 XPCQ01831 940 aaPredicted RBP33.95■■■■□ 3.03
SDHAF1-201ENST00000378887 CDK19Q9BWU1 502 aa33.94■■■■□ 3.02
SDHAF1-201ENST00000378887 ALS2Q96Q42 1657 aa33.92■■■■□ 3.02
SDHAF1-201ENST00000378887 SBNO2Q9Y2G9 1366 aa33.91■■■■□ 3.02
SDHAF1-201ENST00000378887 SPATA31A3Q5VYP0 1347 aa33.9■■■■□ 3.02
SDHAF1-201ENST00000378887 NUDT16Q96DE0 195 aaKnown RBP33.9■■■■□ 3.02
SDHAF1-201ENST00000378887 PMFBP1Q8TBY8 1022 aa33.88■■■■□ 3.01
SDHAF1-201ENST00000378887 ABCA3Q99758 1704 aa33.87■■■■□ 3.01
SDHAF1-201ENST00000378887 TNS3Q68CZ2 1445 aa33.87■■■■□ 3.01
SDHAF1-201ENST00000378887 SBNO1A3KN83 1393 aa33.86■■■■□ 3.01
SDHAF1-201ENST00000378887 POLR3AO14802 1390 aaPredicted RBP33.86■■■■□ 3.01
SDHAF1-201ENST00000378887 CRYBG1Q9Y4K1 1723 aa33.85■■■■□ 3.01
SDHAF1-201ENST00000378887 KRT28Q7Z3Y7 464 aa33.85■■■■□ 3.01
SDHAF1-201ENST00000378887 TIMELESSQ9UNS1 1208 aa33.85■■■■□ 3.01
SDHAF1-201ENST00000378887 CARD11Q9BXL7 1154 aa33.84■■■■□ 3.01
SDHAF1-201ENST00000378887 MARF1Q9Y4F3 1742 aaKnown RBP33.82■■■■□ 3
SDHAF1-201ENST00000378887 PLEKHG3A1L390 1219 aa33.81■■■■□ 3
SDHAF1-201ENST00000378887 CABP2Q9NPB3 220 aa33.79■■■■□ 3
SDHAF1-201ENST00000378887 POTEAQ6S8J7 498 aa33.78■■■■□ 3
SDHAF1-201ENST00000378887 CCDC61Q9Y6R9 512 aa33.78■■■■□ 3
SDHAF1-201ENST00000378887 TESK2Q96S53 571 aa33.77■■■■□ 3
SDHAF1-201ENST00000378887 NUTM2BA6NNL0 878 aaPredicted RBP33.75■■■□□ 2.99
SDHAF1-201ENST00000378887 NUTM2EB1AL46 878 aaPredicted RBP33.75■■■□□ 2.99
SDHAF1-201ENST00000378887 NUTM2AQ8IVF1 878 aaPredicted RBP33.75■■■□□ 2.99
SDHAF1-201ENST00000378887 PPIP5K1Q6PFW1 1433 aa33.75■■■□□ 2.99
SDHAF1-201ENST00000378887 CCER1Q8TC90 406 aaPredicted RBP33.73■■■□□ 2.99
SDHAF1-201ENST00000378887 ACEP12821 1306 aa33.73■■■□□ 2.99
SDHAF1-201ENST00000378887 PHF23Q9BUL5 403 aaPredicted RBP33.72■■■□□ 2.99
SDHAF1-201ENST00000378887 SSH2Q76I76 1423 aa33.71■■■□□ 2.99
SDHAF1-201ENST00000378887 PSME1Q06323 249 aa33.7■■■□□ 2.99
SDHAF1-201ENST00000378887 EVC2Q86UK5 1308 aa33.7■■■□□ 2.99
SDHAF1-201ENST00000378887 AKAP12Q02952 1782 aa33.7■■■□□ 2.98
SDHAF1-201ENST00000378887 SRPK2P78362 688 aaKnown RBP33.69■■■□□ 2.98
SDHAF1-201ENST00000378887 ARHGEF10O15013 1369 aa33.68■■■□□ 2.98
SDHAF1-201ENST00000378887 CD163L1Q9NR16 1453 aa33.67■■■□□ 2.98
SDHAF1-201ENST00000378887 NRKQ7Z2Y5 1582 aa33.67■■■□□ 2.98
SDHAF1-201ENST00000378887 USP47Q96K76 1375 aa33.65■■■□□ 2.98
SDHAF1-201ENST00000378887 ST20-MTHFSA0A0A6YYL1 179 aa33.65■■■□□ 2.98
SDHAF1-201ENST00000378887 NGDNQ8NEJ9 315 aaKnown RBP33.65■■■□□ 2.98
SDHAF1-201ENST00000378887 CPSF1Q10570 1443 aaKnown RBP33.64■■■□□ 2.98
SDHAF1-201ENST00000378887 PHRF1Q9P1Y6 1649 aaKnown RBP33.64■■■□□ 2.98
SDHAF1-201ENST00000378887 AFF2P51816 1311 aa33.63■■■□□ 2.97
SDHAF1-201ENST00000378887 ADAMTS2O95450 1211 aa33.63■■■□□ 2.97
SDHAF1-201ENST00000378887 CABP1Q9NZU7 370 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms