RNA–Protein interactions for RNA: ENST00000378560.8

TCF7-202, Transcript of transcription factor 7, humanhuman

TSL 1 (best) BASIC

Gene TCF7, Length 2,929 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF7-202ENST00000378560 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
TCF7-202ENST00000378560 WDR43Q15061 677 aaKnown RBP eCLIP12.13□□□□□ -0.47
TCF7-202ENST00000378560 RNF17Q9BXT8 1623 aaKnown RBP12.12□□□□□ -0.47
TCF7-202ENST00000378560 DUOX2Q9NRD8 1548 aa12.12□□□□□ -0.47
TCF7-202ENST00000378560 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
TCF7-202ENST00000378560 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
TCF7-202ENST00000378560 C8orf34Q49A92 452 aa12.11□□□□□ -0.47
TCF7-202ENST00000378560 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
TCF7-202ENST00000378560 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
TCF7-202ENST00000378560 FAM161AQ3B820 660 aa12.1□□□□□ -0.47
TCF7-202ENST00000378560 ZNF526Q8TF50 670 aaPredicted RBP12.1□□□□□ -0.47
TCF7-202ENST00000378560 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
TCF7-202ENST00000378560 ABCA9Q8IUA7 1624 aa12.09□□□□□ -0.47
TCF7-202ENST00000378560 CD109Q6YHK3 1445 aa12.09□□□□□ -0.47
TCF7-202ENST00000378560 NFKBIBQ15653 356 aa12.09□□□□□ -0.47
TCF7-202ENST00000378560 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
TCF7-202ENST00000378560 PIK3C2GO75747 1445 aa12.09□□□□□ -0.47
TCF7-202ENST00000378560 CDCA8Q53HL2 280 aa12.08□□□□□ -0.48
TCF7-202ENST00000378560 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
TCF7-202ENST00000378560 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
TCF7-202ENST00000378560 ZFYVE16Q7Z3T8 1539 aa12.08□□□□□ -0.48
TCF7-202ENST00000378560 APBB1O00213 710 aa12.08□□□□□ -0.48
TCF7-202ENST00000378560 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
TCF7-202ENST00000378560 ASXL1Q8IXJ9 1541 aa12.07□□□□□ -0.48
TCF7-202ENST00000378560 PSMD1Q99460 953 aa12.07□□□□□ -0.48
TCF7-202ENST00000378560 MADDQ8WXG6 1647 aa12.07□□□□□ -0.48
TCF7-202ENST00000378560 CCDC146Q8IYE0 955 aa12.07□□□□□ -0.48
TCF7-202ENST00000378560 SCAF11Q99590 1463 aaKnown RBP12.06□□□□□ -0.48
TCF7-202ENST00000378560 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
TCF7-202ENST00000378560 SYNMO15061 1565 aa12.06□□□□□ -0.48
TCF7-202ENST00000378560 GSE1Q14687 1217 aa12.06□□□□□ -0.48
TCF7-202ENST00000378560 GGT6Q6P531 493 aa12.06□□□□□ -0.48
TCF7-202ENST00000378560 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
TCF7-202ENST00000378560 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
TCF7-202ENST00000378560 APAF1O14727 1248 aa12.05□□□□□ -0.48
TCF7-202ENST00000378560 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
TCF7-202ENST00000378560 BCAR3O75815 825 aa12.04□□□□□ -0.48
TCF7-202ENST00000378560 ARAP3Q8WWN8 1544 aa12.04□□□□□ -0.48
TCF7-202ENST00000378560 RGS3P49796 1198 aa12.04□□□□□ -0.48
TCF7-202ENST00000378560 EIF3AQ14152 1382 aaKnown RBP12.04□□□□□ -0.48
TCF7-202ENST00000378560 RTEL1-TNFRSF6BF6WH68 1400 aa12.04□□□□□ -0.48
TCF7-202ENST00000378560 PTPRTO14522 1441 aa12.04□□□□□ -0.48
TCF7-202ENST00000378560 AEBP1Q8IUX7 1158 aa12.04□□□□□ -0.48
TCF7-202ENST00000378560 NKTRP30414 1462 aaKnown RBP12.03□□□□□ -0.48
TCF7-202ENST00000378560 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
TCF7-202ENST00000378560 TRPM2O94759 1503 aa12.02□□□□□ -0.48
TCF7-202ENST00000378560 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.49
TCF7-202ENST00000378560 E9PSI1 815 aa12.02□□□□□ -0.49
TCF7-202ENST00000378560 CLSTN1O94985 981 aa12.01□□□□□ -0.49
TCF7-202ENST00000378560 IGHDP01880 384 aa12.01□□□□□ -0.49
TCF7-202ENST00000378560 PRDM16Q9HAZ2 1276 aa12.01□□□□□ -0.49
TCF7-202ENST00000378560 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
TCF7-202ENST00000378560 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
TCF7-202ENST00000378560 MYOM1P52179 1685 aa12.01□□□□□ -0.49
TCF7-202ENST00000378560 FAM69CQ0P6D2 419 aa12□□□□□ -0.49
TCF7-202ENST00000378560 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
TCF7-202ENST00000378560 INO80Q9ULG1 1556 aaPredicted RBP12□□□□□ -0.49
TCF7-202ENST00000378560 USP19O94966 1318 aa12□□□□□ -0.49
TCF7-202ENST00000378560 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
TCF7-202ENST00000378560 ZNF518AQ6AHZ1 1483 aa11.99□□□□□ -0.49
TCF7-202ENST00000378560 KIDINS220Q9ULH0 1771 aa11.99□□□□□ -0.49
TCF7-202ENST00000378560 KANK1Q14678 1352 aa11.99□□□□□ -0.49
TCF7-202ENST00000378560 FRAT2O75474 233 aaPredicted RBP11.99□□□□□ -0.49
TCF7-202ENST00000378560 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
TCF7-202ENST00000378560 NGEFQ8N5V2 710 aa11.99□□□□□ -0.49
TCF7-202ENST00000378560 CLTCL1P53675 1640 aa11.98□□□□□ -0.49
TCF7-202ENST00000378560 PDE3AQ14432 1141 aa11.98□□□□□ -0.49
TCF7-202ENST00000378560 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
TCF7-202ENST00000378560 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
TCF7-202ENST00000378560 CGNL1Q0VF96 1302 aa11.97□□□□□ -0.49
TCF7-202ENST00000378560 ERVK-7P63135 1459 aa11.97□□□□□ -0.49
TCF7-202ENST00000378560 POGZQ7Z3K3 1410 aa11.97□□□□□ -0.49
TCF7-202ENST00000378560 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
TCF7-202ENST00000378560 CEP152O94986 1710 aa11.96□□□□□ -0.49
TCF7-202ENST00000378560 RIMBP3CA6NJZ7 1639 aa11.96□□□□□ -0.49
TCF7-202ENST00000378560 RIMBP3BA6NNM3 1639 aa11.96□□□□□ -0.49
TCF7-202ENST00000378560 RIMBP3Q9UFD9 1639 aa11.96□□□□□ -0.49
TCF7-202ENST00000378560 PANK1Q8TE04 598 aa11.96□□□□□ -0.5
TCF7-202ENST00000378560 SEC24BO95487 1268 aa11.95□□□□□ -0.5
TCF7-202ENST00000378560 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
TCF7-202ENST00000378560 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
TCF7-202ENST00000378560 ADGRF5Q8IZF2 1346 aa11.95□□□□□ -0.5
TCF7-202ENST00000378560 KDM5AP29375 1690 aaKnown RBP11.94□□□□□ -0.5
TCF7-202ENST00000378560 POLR3AO14802 1390 aaPredicted RBP11.94□□□□□ -0.5
TCF7-202ENST00000378560 MFAP1P55081 439 aaKnown RBP11.94□□□□□ -0.5
TCF7-202ENST00000378560 COG6Q9Y2V7 657 aa11.94□□□□□ -0.5
TCF7-202ENST00000378560 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
TCF7-202ENST00000378560 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
TCF7-202ENST00000378560 KIAA1210Q9ULL0 1709 aa11.93□□□□□ -0.5
TCF7-202ENST00000378560 RBM10P98175 930 aaKnown RBP11.93□□□□□ -0.5
TCF7-202ENST00000378560 DEPDC5O75140 1603 aa11.93□□□□□ -0.5
TCF7-202ENST00000378560 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
TCF7-202ENST00000378560 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
TCF7-202ENST00000378560 TSPOAP1O95153 1857 aa11.92□□□□□ -0.5
TCF7-202ENST00000378560 VWDEQ8N2E2 1590 aa11.92□□□□□ -0.5
TCF7-202ENST00000378560 YEATS2Q9ULM3 1422 aa11.92□□□□□ -0.5
TCF7-202ENST00000378560 TET3O43151 1660 aa11.92□□□□□ -0.5
TCF7-202ENST00000378560 KDM4AO75164 1064 aa11.92□□□□□ -0.5
TCF7-202ENST00000378560 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
TCF7-202ENST00000378560 RARSP54136 660 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms