RNA–Protein interactions for RNA: ENST00000378538.7

SPI1-202, Transcript of Spi-1 proto-oncogene, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPI1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-202ENST00000378538 TMEM132EQ6IEE7 984 aa31.76■■■□□ 2.68
SPI1-202ENST00000378538 LRPPRCP42704 1394 aaKnown RBP31.73■■■□□ 2.67
SPI1-202ENST00000378538 ADAMTS2O95450 1211 aa31.73■■■□□ 2.67
SPI1-202ENST00000378538 ESCO1Q5FWF5 840 aa31.72■■■□□ 2.67
SPI1-202ENST00000378538 UPF1Q92900 1129 aaKnown RBP eCLIP31.72■■■□□ 2.67
SPI1-202ENST00000378538 TECPR2O15040 1411 aa31.72■■■□□ 2.67
SPI1-202ENST00000378538 CDC42BPGQ6DT37 1551 aa31.71■■■□□ 2.67
SPI1-202ENST00000378538 PIK3C2GO75747 1445 aa31.71■■■□□ 2.67
SPI1-202ENST00000378538 ABCC11Q96J66 1382 aa31.71■■■□□ 2.67
SPI1-202ENST00000378538 QTRT2Q9H974 415 aaKnown RBP31.71■■■□□ 2.67
SPI1-202ENST00000378538 PLEKHH1Q9ULM0 1364 aa31.69■■■□□ 2.66
SPI1-202ENST00000378538 NGLY1Q96IV0 654 aa31.68■■■□□ 2.66
SPI1-202ENST00000378538 CDK12Q9NYV4 1490 aaPredicted RBP31.68■■■□□ 2.66
SPI1-202ENST00000378538 ACIN1Q9UKV3 1341 aaKnown RBP31.67■■■□□ 2.66
SPI1-202ENST00000378538 NUTM2FA1L443 756 aa31.66■■■□□ 2.66
SPI1-202ENST00000378538 NPHP3Q7Z494 1330 aa31.65■■■□□ 2.66
SPI1-202ENST00000378538 FOXO3O43524 673 aa31.65■■■□□ 2.66
SPI1-202ENST00000378538 RBM6P78332 1123 aaKnown RBP31.64■■■□□ 2.66
SPI1-202ENST00000378538 KNDC1Q76NI1 1749 aa31.64■■■□□ 2.66
SPI1-202ENST00000378538 YTHDC2Q9H6S0 1430 aaKnown RBP31.64■■■□□ 2.66
SPI1-202ENST00000378538 C14orf93Q9H972 538 aaKnown RBP31.64■■■□□ 2.66
SPI1-202ENST00000378538 XPCQ01831 940 aaPredicted RBP31.62■■■□□ 2.65
SPI1-202ENST00000378538 PXDNQ92626 1479 aa31.62■■■□□ 2.65
SPI1-202ENST00000378538 COL22A1Q8NFW1 1626 aaPredicted RBP31.61■■■□□ 2.65
SPI1-202ENST00000378538 CFAP70Q5T0N1 1121 aa31.6■■■□□ 2.65
SPI1-202ENST00000378538 RAB3GAP2Q9H2M9 1393 aa31.6■■■□□ 2.65
SPI1-202ENST00000378538 SIRT1Q96EB6 747 aa31.59■■■□□ 2.65
SPI1-202ENST00000378538 NRXN1Q9ULB1 1477 aa31.58■■■□□ 2.65
SPI1-202ENST00000378538 RGS12O14924 1447 aa31.57■■■□□ 2.65
SPI1-202ENST00000378538 FNBP4Q8N3X1 1017 aaPredicted RBP31.57■■■□□ 2.64
SPI1-202ENST00000378538 USP21Q9UK80 565 aa31.57■■■□□ 2.64
SPI1-202ENST00000378538 MYOM2P54296 1465 aa31.55■■■□□ 2.64
SPI1-202ENST00000378538 FMN2Q9NZ56 1722 aa31.55■■■□□ 2.64
SPI1-202ENST00000378538 DHX57Q6P158 1386 aaKnown RBP31.53■■■□□ 2.64
SPI1-202ENST00000378538 TRPC5Q9UL62 973 aaPredicted RBP31.5■■■□□ 2.63
SPI1-202ENST00000378538 RGPD8O14715 1765 aaPredicted RBP31.48■■■□□ 2.63
SPI1-202ENST00000378538 SAFB2Q14151 953 aaKnown RBP eCLIP31.47■■■□□ 2.63
SPI1-202ENST00000378538 PRAM1Q96QH2 718 aa31.47■■■□□ 2.63
SPI1-202ENST00000378538 SPATA31A3Q5VYP0 1347 aa31.46■■■□□ 2.63
SPI1-202ENST00000378538 KRT28Q7Z3Y7 464 aa31.46■■■□□ 2.63
SPI1-202ENST00000378538 ATRNO75882 1429 aa31.45■■■□□ 2.63
SPI1-202ENST00000378538 MARF1Q9Y4F3 1742 aaKnown RBP31.45■■■□□ 2.62
SPI1-202ENST00000378538 BCL9LQ86UU0 1499 aa31.44■■■□□ 2.62
SPI1-202ENST00000378538 PHF8Q9UPP1 1060 aa31.43■■■□□ 2.62
SPI1-202ENST00000378538 KIF1AQ12756 1690 aa31.43■■■□□ 2.62
SPI1-202ENST00000378538 KDM2AQ9Y2K7 1162 aa31.41■■■□□ 2.62
SPI1-202ENST00000378538 POGKQ9P215 609 aa31.4■■■□□ 2.62
SPI1-202ENST00000378538 DLC1Q96QB1 1528 aa31.37■■■□□ 2.61
SPI1-202ENST00000378538 ADGRB1O14514 1584 aa31.37■■■□□ 2.61
SPI1-202ENST00000378538 DCAF11Q8TEB1 546 aa31.37■■■□□ 2.61
SPI1-202ENST00000378538 EP400Q96L91 3159 aa31.36■■■□□ 2.61
SPI1-202ENST00000378538 TRAK1Q9UPV9 953 aa31.36■■■□□ 2.61
SPI1-202ENST00000378538 HRCP23327 699 aa31.35■■■□□ 2.61
SPI1-202ENST00000378538 PSME1Q06323 249 aa31.34■■■□□ 2.61
SPI1-202ENST00000378538 GJD4Q96KN9 370 aaPredicted RBP31.33■■■□□ 2.61
SPI1-202ENST00000378538 CABLES1Q8TDN4 633 aa31.32■■■□□ 2.61
SPI1-202ENST00000378538 ATAD2Q6PL18 1390 aa31.32■■■□□ 2.6
SPI1-202ENST00000378538 PMFBP1Q8TBY8 1022 aa31.32■■■□□ 2.6
SPI1-202ENST00000378538 USP32Q8NFA0 1604 aa31.31■■■□□ 2.6
SPI1-202ENST00000378538 TNS3Q68CZ2 1445 aa31.31■■■□□ 2.6
SPI1-202ENST00000378538 UNC5CLQ8IV45 518 aa31.31■■■□□ 2.6
SPI1-202ENST00000378538 HIRIP3Q9BW71 556 aaPredicted RBP31.31■■■□□ 2.6
SPI1-202ENST00000378538 SLIT2O94813 1529 aa31.31■■■□□ 2.6
SPI1-202ENST00000378538 SBNO1A3KN83 1393 aa31.29■■■□□ 2.6
SPI1-202ENST00000378538 PLEKHG5O94827 1062 aa31.28■■■□□ 2.6
SPI1-202ENST00000378538 ANKARQ7Z5J8 1434 aa31.28■■■□□ 2.6
SPI1-202ENST00000378538 MINK1Q8N4C8 1332 aaPredicted RBP31.27■■■□□ 2.6
SPI1-202ENST00000378538 ADGRB2O60241 1585 aa31.27■■■□□ 2.6
SPI1-202ENST00000378538 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.27■■■□□ 2.6
SPI1-202ENST00000378538 LMOD2Q6P5Q4 547 aa31.26■■■□□ 2.6
SPI1-202ENST00000378538 STAC3Q96MF2 364 aa31.26■■■□□ 2.6
SPI1-202ENST00000378538 HAP1P54257 671 aaPredicted RBP31.24■■■□□ 2.59
SPI1-202ENST00000378538 PRR36Q9H6K5 1346 aa31.24■■■□□ 2.59
SPI1-202ENST00000378538 RALGAPBQ86X10 1494 aa31.22■■■□□ 2.59
SPI1-202ENST00000378538 GLI3P10071 1580 aa31.22■■■□□ 2.59
SPI1-202ENST00000378538 WASLO00401 505 aaPredicted RBP31.21■■■□□ 2.59
SPI1-202ENST00000378538 ARHGEF10O15013 1369 aa31.2■■■□□ 2.59
SPI1-202ENST00000378538 SRCAPQ6ZRS2 3230 aa31.2■■■□□ 2.59
SPI1-202ENST00000378538 ABCA3Q99758 1704 aa31.18■■■□□ 2.58
SPI1-202ENST00000378538 TRPM3Q9HCF6 1732 aaPredicted RBP31.17■■■□□ 2.58
SPI1-202ENST00000378538 FAM83GA6ND36 823 aa31.16■■■□□ 2.58
SPI1-202ENST00000378538 TULP4Q9NRJ4 1543 aa31.16■■■□□ 2.58
SPI1-202ENST00000378538 VPS72Q15906 364 aa31.15■■■□□ 2.58
SPI1-202ENST00000378538 EIF3AQ14152 1382 aaKnown RBP31.15■■■□□ 2.58
SPI1-202ENST00000378538 PLCH1Q4KWH8 1693 aa31.13■■■□□ 2.57
SPI1-202ENST00000378538 GPRASP1Q5JY77 1395 aa31.13■■■□□ 2.57
SPI1-202ENST00000378538 CCDC125Q86Z20 511 aa31.12■■■□□ 2.57
SPI1-202ENST00000378538 ARHGEF28Q8N1W1 1705 aaKnown RBP31.12■■■□□ 2.57
SPI1-202ENST00000378538 NWD2Q9ULI1 1742 aa31.12■■■□□ 2.57
SPI1-202ENST00000378538 ALS2Q96Q42 1657 aa31.11■■■□□ 2.57
SPI1-202ENST00000378538 BRWD3Q6RI45 1802 aa31.11■■■□□ 2.57
SPI1-202ENST00000378538 NGDNQ8NEJ9 315 aaKnown RBP31.1■■■□□ 2.57
SPI1-202ENST00000378538 SEPT12Q8IYM1 358 aa31.09■■■□□ 2.57
SPI1-202ENST00000378538 ONECUT3O60422 494 aaPredicted RBP31.08■■■□□ 2.57
SPI1-202ENST00000378538 CCDC9Q9Y3X0 531 aaKnown RBP31.08■■■□□ 2.57
SPI1-202ENST00000378538 NUDT16Q96DE0 195 aaKnown RBP31.07■■■□□ 2.57
SPI1-202ENST00000378538 PAK3O75914 559 aaPredicted RBP31.05■■■□□ 2.56
SPI1-202ENST00000378538 CDK19Q9BWU1 502 aa31.04■■■□□ 2.56
SPI1-202ENST00000378538 BTG4Q9NY30 223 aa31.04■■■□□ 2.56
SPI1-202ENST00000378538 ATP7BP35670 1465 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms