RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 DEPDC5O75140 1603 aa19.91■□□□□ 0.78
RER1-203ENST00000378513 U2SURPO15042 1029 aaKnown RBP19.9■□□□□ 0.78
RER1-203ENST00000378513 GGNBP2Q9H3C7 697 aa19.9■□□□□ 0.78
RER1-203ENST00000378513 TSR2Q969E8 191 aaKnown RBP19.9■□□□□ 0.78
RER1-203ENST00000378513 PPRC1Q5VV67 1664 aaKnown RBP19.9■□□□□ 0.78
RER1-203ENST00000378513 FBLN1P23142 703 aa19.89■□□□□ 0.78
RER1-203ENST00000378513 NPC1L1Q9UHC9 1359 aa19.89■□□□□ 0.77
RER1-203ENST00000378513 SRPK2P78362 688 aaKnown RBP19.88■□□□□ 0.77
RER1-203ENST00000378513 ABCA9Q8IUA7 1624 aa19.88■□□□□ 0.77
RER1-203ENST00000378513 VWDEQ8N2E2 1590 aa19.88■□□□□ 0.77
RER1-203ENST00000378513 MINK1Q8N4C8 1332 aaPredicted RBP19.87■□□□□ 0.77
RER1-203ENST00000378513 RUNDC1Q96C34 613 aa19.87■□□□□ 0.77
RER1-203ENST00000378513 EFCAB6Q5THR3 1501 aa19.87■□□□□ 0.77
RER1-203ENST00000378513 KIDINS220Q9ULH0 1771 aa19.86■□□□□ 0.77
RER1-203ENST00000378513 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
RER1-203ENST00000378513 RARSP54136 660 aaKnown RBP19.85■□□□□ 0.77
RER1-203ENST00000378513 DDRGK1Q96HY6 314 aa19.85■□□□□ 0.77
RER1-203ENST00000378513 PCDHB15Q9Y5E8 787 aa19.85■□□□□ 0.77
RER1-203ENST00000378513 IDI1Q13907 227 aa19.85■□□□□ 0.77
RER1-203ENST00000378513 KIF1BO60333 1816 aa19.85■□□□□ 0.77
RER1-203ENST00000378513 MYOM2P54296 1465 aa19.84■□□□□ 0.77
RER1-203ENST00000378513 NFKBIBQ15653 356 aa19.84■□□□□ 0.77
RER1-203ENST00000378513 PPM1GO15355 546 aaPredicted RBP19.84■□□□□ 0.77
RER1-203ENST00000378513 CGNL1Q0VF96 1302 aa19.83■□□□□ 0.77
RER1-203ENST00000378513 POLR3AO14802 1390 aaPredicted RBP19.83■□□□□ 0.76
RER1-203ENST00000378513 ARAP3Q8WWN8 1544 aa19.82■□□□□ 0.76
RER1-203ENST00000378513 ZNF518AQ6AHZ1 1483 aa19.81■□□□□ 0.76
RER1-203ENST00000378513 CFAP53Q96M91 514 aa19.81■□□□□ 0.76
RER1-203ENST00000378513 FBXO31Q5XUX0 539 aaPredicted RBP19.8■□□□□ 0.76
RER1-203ENST00000378513 FRAT2O75474 233 aaPredicted RBP19.79■□□□□ 0.76
RER1-203ENST00000378513 EVC2Q86UK5 1308 aa19.79■□□□□ 0.76
RER1-203ENST00000378513 SLC24A1O60721 1099 aa19.78■□□□□ 0.76
RER1-203ENST00000378513 PDE3AQ14432 1141 aa19.78■□□□□ 0.76
RER1-203ENST00000378513 SPRYD3Q8NCJ5 442 aa19.78■□□□□ 0.76
RER1-203ENST00000378513 SLKQ9H2G2 1235 aaPredicted RBP19.78■□□□□ 0.76
RER1-203ENST00000378513 PRAM1Q96QH2 718 aa19.77■□□□□ 0.76
RER1-203ENST00000378513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.76■□□□□ 0.75
RER1-203ENST00000378513 ARXQ96QS3 562 aa19.76■□□□□ 0.75
RER1-203ENST00000378513 POGKQ9P215 609 aa19.76■□□□□ 0.75
RER1-203ENST00000378513 VGFO15240 615 aaPredicted RBP19.76■□□□□ 0.75
RER1-203ENST00000378513 OSCARQ8IYS5 282 aa19.76■□□□□ 0.75
RER1-203ENST00000378513 ADGRB3O60242 1522 aa19.76■□□□□ 0.75
RER1-203ENST00000378513 EXOSC9Q06265 439 aaKnown RBP19.76■□□□□ 0.75
RER1-203ENST00000378513 PDZRN3Q9UPQ7 1066 aa19.75■□□□□ 0.75
RER1-203ENST00000378513 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
RER1-203ENST00000378513 POGZQ7Z3K3 1410 aa19.74■□□□□ 0.75
RER1-203ENST00000378513 FRMPD1Q5SYB0 1578 aa19.74■□□□□ 0.75
RER1-203ENST00000378513 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
RER1-203ENST00000378513 USP19O94966 1318 aa19.74■□□□□ 0.75
RER1-203ENST00000378513 FTSJ3Q8IY81 847 aaKnown RBP19.73■□□□□ 0.75
RER1-203ENST00000378513 SBNO2Q9Y2G9 1366 aa19.73■□□□□ 0.75
RER1-203ENST00000378513 ADGRB1O14514 1584 aa19.73■□□□□ 0.75
RER1-203ENST00000378513 QRICH2Q9H0J4 1663 aa19.73■□□□□ 0.75
RER1-203ENST00000378513 MLECQ14165 292 aa19.73■□□□□ 0.75
RER1-203ENST00000378513 SMC4Q9NTJ3 1288 aa19.73■□□□□ 0.75
RER1-203ENST00000378513 A0A1W2PP64 1363 aa19.73■□□□□ 0.75
RER1-203ENST00000378513 STAG3Q9UJ98 1225 aa19.72■□□□□ 0.75
RER1-203ENST00000378513 IFT172Q9UG01 1749 aa19.7■□□□□ 0.74
RER1-203ENST00000378513 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
RER1-203ENST00000378513 ITPRIPQ8IWB1 547 aa19.7■□□□□ 0.74
RER1-203ENST00000378513 THUMPD2Q9BTF0 503 aaKnown RBP19.7■□□□□ 0.74
RER1-203ENST00000378513 SHPRHQ149N8 1683 aa19.69■□□□□ 0.74
RER1-203ENST00000378513 FYB1O15117 783 aa19.69■□□□□ 0.74
RER1-203ENST00000378513 GSE1Q14687 1217 aa19.69■□□□□ 0.74
RER1-203ENST00000378513 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
RER1-203ENST00000378513 TULP4Q9NRJ4 1543 aa19.69■□□□□ 0.74
RER1-203ENST00000378513 WDR63Q8IWG1 891 aa19.69■□□□□ 0.74
RER1-203ENST00000378513 YEATS2Q9ULM3 1422 aa19.69■□□□□ 0.74
RER1-203ENST00000378513 SSH1Q8WYL5 1049 aa19.68■□□□□ 0.74
RER1-203ENST00000378513 PHF23Q9BUL5 403 aaPredicted RBP19.68■□□□□ 0.74
RER1-203ENST00000378513 ABCC3O15438 1527 aa19.68■□□□□ 0.74
RER1-203ENST00000378513 TMPOP42166 694 aaKnown RBP19.68■□□□□ 0.74
RER1-203ENST00000378513 MYH16Q9H6N6 1097 aa19.68■□□□□ 0.74
RER1-203ENST00000378513 ANKRD36BQ8N2N9 1353 aa19.68■□□□□ 0.74
RER1-203ENST00000378513 ELL2O00472 640 aaPredicted RBP19.68■□□□□ 0.74
RER1-203ENST00000378513 RIPK4P57078 832 aa19.68■□□□□ 0.74
RER1-203ENST00000378513 USP35Q9P2H5 1018 aa19.68■□□□□ 0.74
RER1-203ENST00000378513 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
RER1-203ENST00000378513 HMOX1P09601 288 aa19.67■□□□□ 0.74
RER1-203ENST00000378513 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
RER1-203ENST00000378513 TRIM35Q9UPQ4 493 aa19.67■□□□□ 0.74
RER1-203ENST00000378513 RPGRIP1LQ68CZ1 1315 aa19.66■□□□□ 0.74
RER1-203ENST00000378513 DZIP1LQ8IYY4 767 aaKnown RBP19.66■□□□□ 0.74
RER1-203ENST00000378513 SIGLEC1Q9BZZ2 1709 aa19.65■□□□□ 0.74
RER1-203ENST00000378513 TRIM27P14373 513 aa19.65■□□□□ 0.74
RER1-203ENST00000378513 GLI2P10070 1586 aa19.65■□□□□ 0.74
RER1-203ENST00000378513 PPLO60437 1756 aa19.65■□□□□ 0.74
RER1-203ENST00000378513 ZKSCAN2Q63HK3 967 aa19.65■□□□□ 0.74
RER1-203ENST00000378513 NOB1Q9ULX3 412 aaKnown RBP19.65■□□□□ 0.74
RER1-203ENST00000378513 NGEFQ8N5V2 710 aa19.65■□□□□ 0.74
RER1-203ENST00000378513 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
RER1-203ENST00000378513 IQSEC2Q5JU85 1478 aa19.65■□□□□ 0.74
RER1-203ENST00000378513 LMTK2Q8IWU2 1503 aa19.64■□□□□ 0.73
RER1-203ENST00000378513 MVPQ14764 893 aaKnown RBP19.64■□□□□ 0.73
RER1-203ENST00000378513 PMFBP1Q8TBY8 1022 aa19.64■□□□□ 0.73
RER1-203ENST00000378513 NCKAP5LQ9HCH0 1330 aa19.63■□□□□ 0.73
RER1-203ENST00000378513 ZRANB1Q9UGI0 708 aa19.63■□□□□ 0.73
RER1-203ENST00000378513 PLEKHF1Q96S99 279 aa19.62■□□□□ 0.73
RER1-203ENST00000378513 MLH3Q9UHC1 1453 aa19.62■□□□□ 0.73
RER1-203ENST00000378513 MYO3AQ8NEV4 1616 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms