RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 FOXD4L3Q6VB84 417 aaPredicted RBP13.81□□□□□ -0.2
RPGR-203ENST00000378505 CDC45O75419 566 aa13.8□□□□□ -0.2
RPGR-203ENST00000378505 WDR63Q8IWG1 891 aa13.8□□□□□ -0.2
RPGR-203ENST00000378505 PDZRN3Q9UPQ7 1066 aa13.8□□□□□ -0.2
RPGR-203ENST00000378505 LRRFIP1Q32MZ4 808 aaKnown RBP13.8□□□□□ -0.2
RPGR-203ENST00000378505 PRAM1Q96QH2 718 aa13.8□□□□□ -0.2
RPGR-203ENST00000378505 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
RPGR-203ENST00000378505 BICRAQ9NZM4 1560 aa13.8□□□□□ -0.2
RPGR-203ENST00000378505 TOMM22Q9NS69 142 aa13.79□□□□□ -0.2
RPGR-203ENST00000378505 C11orf95C9JLR9 678 aaPredicted RBP13.79□□□□□ -0.2
RPGR-203ENST00000378505 G3BP1Q13283 466 aaKnown RBP eCLIP13.79□□□□□ -0.2
RPGR-203ENST00000378505 RSPH6AQ9H0K4 717 aa13.79□□□□□ -0.2
RPGR-203ENST00000378505 NINLQ9Y2I6 1382 aa13.78□□□□□ -0.2
RPGR-203ENST00000378505 NLRP6P59044 892 aa13.78□□□□□ -0.2
RPGR-203ENST00000378505 CCDC9Q9Y3X0 531 aaKnown RBP13.78□□□□□ -0.2
RPGR-203ENST00000378505 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
RPGR-203ENST00000378505 RPGRIP1LQ68CZ1 1315 aa13.77□□□□□ -0.2
RPGR-203ENST00000378505 IQGAP2Q13576 1575 aa13.77□□□□□ -0.2
RPGR-203ENST00000378505 ABCC5O15440 1437 aa13.77□□□□□ -0.2
RPGR-203ENST00000378505 GTF2E1P29083 439 aaPredicted RBP13.77□□□□□ -0.21
RPGR-203ENST00000378505 GNAI3P08754 354 aa13.77□□□□□ -0.21
RPGR-203ENST00000378505 ERC2O15083 957 aa13.76□□□□□ -0.21
RPGR-203ENST00000378505 TWISTNBQ3B726 338 aaPredicted RBP13.76□□□□□ -0.21
RPGR-203ENST00000378505 CPLX2Q6PUV4 134 aaKnown RBP13.76□□□□□ -0.21
RPGR-203ENST00000378505 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
RPGR-203ENST00000378505 UBTFL1P0CB47 393 aaPredicted RBP13.76□□□□□ -0.21
RPGR-203ENST00000378505 GAS2L2Q8NHY3 880 aa13.76□□□□□ -0.21
RPGR-203ENST00000378505 GCC1Q96CN9 775 aa13.76□□□□□ -0.21
RPGR-203ENST00000378505 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
RPGR-203ENST00000378505 GOLGA6L19H0YKK7 550 aa13.75□□□□□ -0.21
RPGR-203ENST00000378505 BECN2A8MW95 431 aa13.75□□□□□ -0.21
RPGR-203ENST00000378505 CABP1Q9NZU7 370 aa13.75□□□□□ -0.21
RPGR-203ENST00000378505 RAPGEF4Q8WZA2 1011 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 PEG3Q9GZU2 1588 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 CUL7Q14999 1698 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 ARID3AQ99856 593 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 NOB1Q9ULX3 412 aaKnown RBP13.74□□□□□ -0.21
RPGR-203ENST00000378505 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
RPGR-203ENST00000378505 CDK19Q9BWU1 502 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 SMC3Q9UQE7 1217 aa13.74□□□□□ -0.21
RPGR-203ENST00000378505 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
RPGR-203ENST00000378505 RASSF8Q8NHQ8 419 aa13.73□□□□□ -0.21
RPGR-203ENST00000378505 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
RPGR-203ENST00000378505 EVA1CP58658 441 aa13.73□□□□□ -0.21
RPGR-203ENST00000378505 CCDC30Q5VVM6 783 aa13.73□□□□□ -0.21
RPGR-203ENST00000378505 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
RPGR-203ENST00000378505 MCTP1Q6DN14 999 aa13.72□□□□□ -0.21
RPGR-203ENST00000378505 MVPQ14764 893 aaKnown RBP13.72□□□□□ -0.21
RPGR-203ENST00000378505 ARHGEF11O15085 1522 aa13.72□□□□□ -0.21
RPGR-203ENST00000378505 CAMSAP2Q08AD1 1489 aa13.72□□□□□ -0.21
RPGR-203ENST00000378505 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
RPGR-203ENST00000378505 TXNDC2Q86VQ3 553 aa13.71□□□□□ -0.21
RPGR-203ENST00000378505 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
RPGR-203ENST00000378505 MRE11P49959 708 aa13.71□□□□□ -0.21
RPGR-203ENST00000378505 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
RPGR-203ENST00000378505 ZNF428Q96B54 188 aa13.71□□□□□ -0.21
RPGR-203ENST00000378505 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
RPGR-203ENST00000378505 VPS37CA5D8V6 355 aaPredicted RBP13.71□□□□□ -0.22
RPGR-203ENST00000378505 NUTM2GQ5VZR2 741 aa13.71□□□□□ -0.22
RPGR-203ENST00000378505 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.22
RPGR-203ENST00000378505 CLASRPQ8N2M8 674 aaKnown RBP13.71□□□□□ -0.22
RPGR-203ENST00000378505 RPRD2Q5VT52 1461 aaKnown RBP13.7□□□□□ -0.22
RPGR-203ENST00000378505 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
RPGR-203ENST00000378505 SURF6O75683 361 aaKnown RBP13.7□□□□□ -0.22
RPGR-203ENST00000378505 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
RPGR-203ENST00000378505 RIC3Q7Z5B4 369 aa13.7□□□□□ -0.22
RPGR-203ENST00000378505 PLB1Q6P1J6 1458 aa13.7□□□□□ -0.22
RPGR-203ENST00000378505 CPLX1O14810 134 aa13.7□□□□□ -0.22
RPGR-203ENST00000378505 TRAK2O60296 914 aa13.7□□□□□ -0.22
RPGR-203ENST00000378505 AKAP17AQ02040 695 aaKnown RBP13.7□□□□□ -0.22
RPGR-203ENST00000378505 RABEP1Q15276 862 aa13.7□□□□□ -0.22
RPGR-203ENST00000378505 FCHSD2O94868 740 aa13.69□□□□□ -0.22
RPGR-203ENST00000378505 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
RPGR-203ENST00000378505 MCM2P49736 904 aa13.68□□□□□ -0.22
RPGR-203ENST00000378505 C1orf115Q9H7X2 142 aa13.68□□□□□ -0.22
RPGR-203ENST00000378505 RAPGEF3O95398 923 aa13.68□□□□□ -0.22
RPGR-203ENST00000378505 BICD2Q8TD16 824 aa13.68□□□□□ -0.22
RPGR-203ENST00000378505 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
RPGR-203ENST00000378505 GNAI2P04899 355 aa13.68□□□□□ -0.22
RPGR-203ENST00000378505 TRDNQ13061 729 aa13.68□□□□□ -0.22
RPGR-203ENST00000378505 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
RPGR-203ENST00000378505 NEK4P51957 841 aa13.67□□□□□ -0.22
RPGR-203ENST00000378505 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
RPGR-203ENST00000378505 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
RPGR-203ENST00000378505 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
RPGR-203ENST00000378505 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
RPGR-203ENST00000378505 APPP05067 770 aa13.66□□□□□ -0.22
RPGR-203ENST00000378505 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
RPGR-203ENST00000378505 TRIM29Q14134 588 aa13.66□□□□□ -0.22
RPGR-203ENST00000378505 CREBRFQ8IUR6 639 aa13.66□□□□□ -0.22
RPGR-203ENST00000378505 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
RPGR-203ENST00000378505 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
RPGR-203ENST00000378505 TPM3P06753 285 aa13.66□□□□□ -0.22
RPGR-203ENST00000378505 CCT4P50991 539 aaKnown RBP13.66□□□□□ -0.22
RPGR-203ENST00000378505 PLEKHO1Q53GL0 409 aaPredicted RBP13.66□□□□□ -0.22
RPGR-203ENST00000378505 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
RPGR-203ENST00000378505 CLSTN1O94985 981 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms