RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 PIK3R4Q99570 1358 aa19.55■□□□□ 0.72
TPM2-204ENST00000378300 TULP4Q9NRJ4 1543 aa19.55■□□□□ 0.72
TPM2-204ENST00000378300 CHD2O14647 1828 aaKnown RBP19.54■□□□□ 0.72
TPM2-204ENST00000378300 SIRT1Q96EB6 747 aa19.54■□□□□ 0.72
TPM2-204ENST00000378300 SLC24A1O60721 1099 aa19.51■□□□□ 0.71
TPM2-204ENST00000378300 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
TPM2-204ENST00000378300 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
TPM2-204ENST00000378300 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
TPM2-204ENST00000378300 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.5■□□□□ 0.71
TPM2-204ENST00000378300 CDCA8Q53HL2 280 aa19.49■□□□□ 0.71
TPM2-204ENST00000378300 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
TPM2-204ENST00000378300 RBM33Q96EV2 1170 aaKnown RBP19.48■□□□□ 0.71
TPM2-204ENST00000378300 MYOM1P52179 1685 aa19.48■□□□□ 0.71
TPM2-204ENST00000378300 CDK19Q9BWU1 502 aa19.47■□□□□ 0.71
TPM2-204ENST00000378300 SRPK2P78362 688 aaKnown RBP19.46■□□□□ 0.71
TPM2-204ENST00000378300 NWD1Q149M9 1564 aa19.45■□□□□ 0.7
TPM2-204ENST00000378300 MIER1Q8N108 512 aa19.44■□□□□ 0.7
TPM2-204ENST00000378300 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
TPM2-204ENST00000378300 WASLO00401 505 aaPredicted RBP19.44■□□□□ 0.7
TPM2-204ENST00000378300 PANK3Q9H999 370 aa19.43■□□□□ 0.7
TPM2-204ENST00000378300 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
TPM2-204ENST00000378300 SLC12A5Q9H2X9 1139 aa19.42■□□□□ 0.7
TPM2-204ENST00000378300 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
TPM2-204ENST00000378300 PUS7Q96PZ0 661 aaKnown RBP19.41■□□□□ 0.7
TPM2-204ENST00000378300 NALCNQ8IZF0 1738 aa19.39■□□□□ 0.69
TPM2-204ENST00000378300 PER1O15534 1290 aaPredicted RBP19.39■□□□□ 0.69
TPM2-204ENST00000378300 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
TPM2-204ENST00000378300 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
TPM2-204ENST00000378300 ZNF335Q9H4Z2 1342 aaPredicted RBP19.37■□□□□ 0.69
TPM2-204ENST00000378300 PRR36Q9H6K5 1346 aa19.37■□□□□ 0.69
TPM2-204ENST00000378300 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
TPM2-204ENST00000378300 NKTRP30414 1462 aaKnown RBP19.37■□□□□ 0.69
TPM2-204ENST00000378300 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
TPM2-204ENST00000378300 NUDT16Q96DE0 195 aaKnown RBP19.35■□□□□ 0.69
TPM2-204ENST00000378300 CARD14Q9BXL6 1004 aa19.35■□□□□ 0.69
TPM2-204ENST00000378300 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
TPM2-204ENST00000378300 ATP7BP35670 1465 aa19.35■□□□□ 0.69
TPM2-204ENST00000378300 ADGRL3Q9HAR2 1447 aa19.34■□□□□ 0.69
TPM2-204ENST00000378300 ANP32CO43423 234 aa19.34■□□□□ 0.69
TPM2-204ENST00000378300 C14orf37Q86TY3 774 aa19.33■□□□□ 0.68
TPM2-204ENST00000378300 DMRT2Q9Y5R5 561 aa19.33■□□□□ 0.68
TPM2-204ENST00000378300 USP32Q8NFA0 1604 aa19.33■□□□□ 0.68
TPM2-204ENST00000378300 CD163L1Q9NR16 1453 aa19.32■□□□□ 0.68
TPM2-204ENST00000378300 TMEM94Q12767 1356 aa19.32■□□□□ 0.68
TPM2-204ENST00000378300 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
TPM2-204ENST00000378300 CCDC61Q9Y6R9 512 aa19.31■□□□□ 0.68
TPM2-204ENST00000378300 CDC42BPGQ6DT37 1551 aa19.31■□□□□ 0.68
TPM2-204ENST00000378300 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
TPM2-204ENST00000378300 NINLQ9Y2I6 1382 aa19.3■□□□□ 0.68
TPM2-204ENST00000378300 RGPD8O14715 1765 aaPredicted RBP19.3■□□□□ 0.68
TPM2-204ENST00000378300 FMN2Q9NZ56 1722 aa19.3■□□□□ 0.68
TPM2-204ENST00000378300 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
TPM2-204ENST00000378300 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
TPM2-204ENST00000378300 PRKRIP1Q9H875 184 aaPredicted RBP19.29■□□□□ 0.68
TPM2-204ENST00000378300 KNSTRNQ9Y448 316 aa19.29■□□□□ 0.68
TPM2-204ENST00000378300 TOPAZ1Q8N9V7 1692 aa19.28■□□□□ 0.68
TPM2-204ENST00000378300 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
TPM2-204ENST00000378300 XIRP1Q702N8 1843 aaKnown RBP19.28■□□□□ 0.68
TPM2-204ENST00000378300 NSD3Q9BZ95 1437 aa19.27■□□□□ 0.68
TPM2-204ENST00000378300 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
TPM2-204ENST00000378300 LRRC7Q96NW7 1537 aa19.27■□□□□ 0.68
TPM2-204ENST00000378300 C19orf44Q9H6X5 657 aa19.26■□□□□ 0.67
TPM2-204ENST00000378300 TERF2IPQ9NYB0 399 aa19.25■□□□□ 0.67
TPM2-204ENST00000378300 PMFBP1Q8TBY8 1022 aa19.24■□□□□ 0.67
TPM2-204ENST00000378300 CPSF1Q10570 1443 aaKnown RBP19.24■□□□□ 0.67
TPM2-204ENST00000378300 ANKARQ7Z5J8 1434 aa19.24■□□□□ 0.67
TPM2-204ENST00000378300 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
TPM2-204ENST00000378300 GTF3C3Q9Y5Q9 886 aa19.24■□□□□ 0.67
TPM2-204ENST00000378300 NCOA3Q9Y6Q9 1424 aa19.23■□□□□ 0.67
TPM2-204ENST00000378300 PLEKHG3A1L390 1219 aa19.23■□□□□ 0.67
TPM2-204ENST00000378300 KTN1Q86UP2 1357 aaKnown RBP19.22■□□□□ 0.67
TPM2-204ENST00000378300 ITSN1Q15811 1721 aa19.22■□□□□ 0.67
TPM2-204ENST00000378300 ACEP12821 1306 aa19.22■□□□□ 0.67
TPM2-204ENST00000378300 PARD3Q8TEW0 1356 aa19.2■□□□□ 0.66
TPM2-204ENST00000378300 AKAP12Q02952 1782 aa19.2■□□□□ 0.66
TPM2-204ENST00000378300 CCDC184Q52MB2 194 aa19.19■□□□□ 0.66
TPM2-204ENST00000378300 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
TPM2-204ENST00000378300 MSH6P52701 1360 aa19.18■□□□□ 0.66
TPM2-204ENST00000378300 NPC1L1Q9UHC9 1359 aa19.18■□□□□ 0.66
TPM2-204ENST00000378300 ATF3P18847 181 aa19.18■□□□□ 0.66
TPM2-204ENST00000378300 ESCO1Q5FWF5 840 aa19.18■□□□□ 0.66
TPM2-204ENST00000378300 DCCP43146 1447 aa19.18■□□□□ 0.66
TPM2-204ENST00000378300 MON2Q7Z3U7 1717 aa19.18■□□□□ 0.66
TPM2-204ENST00000378300 CGNL1Q0VF96 1302 aa19.17■□□□□ 0.66
TPM2-204ENST00000378300 RALBP1Q15311 655 aa19.17■□□□□ 0.66
TPM2-204ENST00000378300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.17■□□□□ 0.66
TPM2-204ENST00000378300 POLR3AO14802 1390 aaPredicted RBP19.17■□□□□ 0.66
TPM2-204ENST00000378300 LTBP4Q8N2S1 1624 aa19.17■□□□□ 0.66
TPM2-204ENST00000378300 C1orf167Q5SNV9 1468 aa19.17■□□□□ 0.66
TPM2-204ENST00000378300 MST1RQ04912 1400 aa19.17■□□□□ 0.66
TPM2-204ENST00000378300 NGDNQ8NEJ9 315 aaKnown RBP19.16■□□□□ 0.66
TPM2-204ENST00000378300 FYB1O15117 783 aa19.16■□□□□ 0.66
TPM2-204ENST00000378300 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
TPM2-204ENST00000378300 PHF8Q9UPP1 1060 aa19.16■□□□□ 0.66
TPM2-204ENST00000378300 USP6P35125 1406 aa19.15■□□□□ 0.66
TPM2-204ENST00000378300 EDC4Q6P2E9 1401 aaKnown RBP19.15■□□□□ 0.66
TPM2-204ENST00000378300 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
TPM2-204ENST00000378300 GGNBP2Q9H3C7 697 aa19.15■□□□□ 0.66
TPM2-204ENST00000378300 CADPS2Q86UW7 1296 aa19.14■□□□□ 0.66
TPM2-204ENST00000378300 NRKQ7Z2Y5 1582 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms