RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 MINK1Q8N4C8 1332 aaPredicted RBP25.38■■□□□ 1.65
PCDHA4-201ENST00000378125 ZNF521Q96K83 1311 aa25.37■■□□□ 1.65
PCDHA4-201ENST00000378125 PRAM1Q96QH2 718 aa25.36■■□□□ 1.65
PCDHA4-201ENST00000378125 SPINK5Q9NQ38 1064 aaPredicted RBP25.35■■□□□ 1.65
PCDHA4-201ENST00000378125 POGKQ9P215 609 aa25.35■■□□□ 1.65
PCDHA4-201ENST00000378125 ZFYVE9O95405 1425 aa25.34■■□□□ 1.65
PCDHA4-201ENST00000378125 CLTCQ00610 1675 aaKnown RBP25.34■■□□□ 1.65
PCDHA4-201ENST00000378125 C20orf194Q5TEA3 1177 aa25.34■■□□□ 1.65
PCDHA4-201ENST00000378125 CGNL1Q0VF96 1302 aa25.33■■□□□ 1.65
PCDHA4-201ENST00000378125 CRBNQ96SW2 442 aa25.32■■□□□ 1.64
PCDHA4-201ENST00000378125 MTHFSP49914 203 aa25.31■■□□□ 1.64
PCDHA4-201ENST00000378125 SLFN5Q08AF3 891 aa25.31■■□□□ 1.64
PCDHA4-201ENST00000378125 NEUROD2Q15784 382 aa25.31■■□□□ 1.64
PCDHA4-201ENST00000378125 DMRT2Q9Y5R5 561 aa25.31■■□□□ 1.64
PCDHA4-201ENST00000378125 POLR3AO14802 1390 aaPredicted RBP25.3■■□□□ 1.64
PCDHA4-201ENST00000378125 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
PCDHA4-201ENST00000378125 ANKRD36BQ8N2N9 1353 aa25.29■■□□□ 1.64
PCDHA4-201ENST00000378125 MSH5O43196 834 aa25.28■■□□□ 1.64
PCDHA4-201ENST00000378125 PTPRMP28827 1452 aa25.28■■□□□ 1.64
PCDHA4-201ENST00000378125 RRP7AQ9Y3A4 280 aaKnown RBP25.28■■□□□ 1.64
PCDHA4-201ENST00000378125 A0A1W2PP64 1363 aa25.26■■□□□ 1.63
PCDHA4-201ENST00000378125 ALKQ9UM73 1620 aa25.25■■□□□ 1.63
PCDHA4-201ENST00000378125 AGLP35573 1532 aa25.25■■□□□ 1.63
PCDHA4-201ENST00000378125 PUS7Q96PZ0 661 aaKnown RBP25.25■■□□□ 1.63
PCDHA4-201ENST00000378125 GGNBP2Q9H3C7 697 aa25.25■■□□□ 1.63
PCDHA4-201ENST00000378125 WAPLQ7Z5K2 1190 aa25.23■■□□□ 1.63
PCDHA4-201ENST00000378125 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
PCDHA4-201ENST00000378125 REREQ9P2R6 1566 aa25.22■■□□□ 1.63
PCDHA4-201ENST00000378125 FANCIQ9NVI1 1328 aa25.22■■□□□ 1.63
PCDHA4-201ENST00000378125 SHPRHQ149N8 1683 aa25.22■■□□□ 1.63
PCDHA4-201ENST00000378125 PPP6R1Q9UPN7 881 aa25.22■■□□□ 1.63
PCDHA4-201ENST00000378125 A2ML1A8K2U0 1454 aa25.21■■□□□ 1.63
PCDHA4-201ENST00000378125 CDK19Q9BWU1 502 aa25.21■■□□□ 1.63
PCDHA4-201ENST00000378125 KIF13AQ9H1H9 1805 aa25.21■■□□□ 1.63
PCDHA4-201ENST00000378125 TRMT2AQ8IZ69 625 aaKnown RBP25.2■■□□□ 1.63
PCDHA4-201ENST00000378125 CFAP53Q96M91 514 aa25.2■■□□□ 1.62
PCDHA4-201ENST00000378125 USP32Q8NFA0 1604 aa25.2■■□□□ 1.62
PCDHA4-201ENST00000378125 WWC1Q8IX03 1113 aa25.19■■□□□ 1.62
PCDHA4-201ENST00000378125 RIMS2Q9UQ26 1411 aa25.19■■□□□ 1.62
PCDHA4-201ENST00000378125 ANP32EQ9BTT0 268 aa25.19■■□□□ 1.62
PCDHA4-201ENST00000378125 E9PSI1 815 aa25.18■■□□□ 1.62
PCDHA4-201ENST00000378125 SKAP1Q86WV1 359 aa25.18■■□□□ 1.62
PCDHA4-201ENST00000378125 BCAR3O75815 825 aa25.18■■□□□ 1.62
PCDHA4-201ENST00000378125 TCP11L2Q8N4U5 519 aa25.18■■□□□ 1.62
PCDHA4-201ENST00000378125 RUNDC1Q96C34 613 aa25.17■■□□□ 1.62
PCDHA4-201ENST00000378125 CABP1Q9NZU7 370 aa25.17■■□□□ 1.62
PCDHA4-201ENST00000378125 SPATA31D1Q6ZQQ2 1576 aa25.17■■□□□ 1.62
PCDHA4-201ENST00000378125 U2AF1L5P0DN76 240 aaPredicted RBP25.16■■□□□ 1.62
PCDHA4-201ENST00000378125 U2AF1Q01081 240 aaKnown RBP eCLIP25.16■■□□□ 1.62
PCDHA4-201ENST00000378125 TERF2IPQ9NYB0 399 aa25.15■■□□□ 1.62
PCDHA4-201ENST00000378125 NKTRP30414 1462 aaKnown RBP25.15■■□□□ 1.62
PCDHA4-201ENST00000378125 ZMYM3Q14202 1370 aa25.15■■□□□ 1.62
PCDHA4-201ENST00000378125 ATAD2Q6PL18 1390 aa25.15■■□□□ 1.62
PCDHA4-201ENST00000378125 ARHGEF40Q8TER5 1519 aa25.15■■□□□ 1.62
PCDHA4-201ENST00000378125 ABCC11Q96J66 1382 aa25.14■■□□□ 1.62
PCDHA4-201ENST00000378125 NSD2O96028 1365 aa25.14■■□□□ 1.61
PCDHA4-201ENST00000378125 FYB1O15117 783 aa25.13■■□□□ 1.61
PCDHA4-201ENST00000378125 CD163L1Q9NR16 1453 aa25.12■■□□□ 1.61
PCDHA4-201ENST00000378125 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.12■■□□□ 1.61
PCDHA4-201ENST00000378125 U2SURPO15042 1029 aaKnown RBP25.11■■□□□ 1.61
PCDHA4-201ENST00000378125 HDGFL2Q7Z4V5 671 aaPredicted RBP25.11■■□□□ 1.61
PCDHA4-201ENST00000378125 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.11■■□□□ 1.61
PCDHA4-201ENST00000378125 NINLQ9Y2I6 1382 aa25.1■■□□□ 1.61
PCDHA4-201ENST00000378125 MYT1Q01538 1121 aa25.1■■□□□ 1.61
PCDHA4-201ENST00000378125 TXNDC2Q86VQ3 553 aa25.08■■□□□ 1.61
PCDHA4-201ENST00000378125 FBLN1P23142 703 aa25.08■■□□□ 1.61
PCDHA4-201ENST00000378125 PLPPR3Q6T4P5 718 aa25.07■■□□□ 1.6
PCDHA4-201ENST00000378125 NGEFQ8N5V2 710 aa25.07■■□□□ 1.6
PCDHA4-201ENST00000378125 METP08581 1390 aa25.07■■□□□ 1.6
PCDHA4-201ENST00000378125 IQSEC2Q5JU85 1478 aa25.05■■□□□ 1.6
PCDHA4-201ENST00000378125 TCERG1O14776 1098 aaKnown RBP25.03■■□□□ 1.6
PCDHA4-201ENST00000378125 PPM1GO15355 546 aaPredicted RBP25.03■■□□□ 1.6
PCDHA4-201ENST00000378125 ERICH6Q7L0X2 663 aa25.02■■□□□ 1.6
PCDHA4-201ENST00000378125 SETD1AO15047 1707 aaKnown RBP25.02■■□□□ 1.6
PCDHA4-201ENST00000378125 NCKAP5LQ9HCH0 1330 aa25.02■■□□□ 1.6
PCDHA4-201ENST00000378125 CANXP27824 592 aaKnown RBP25.01■■□□□ 1.59
PCDHA4-201ENST00000378125 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.01■■□□□ 1.59
PCDHA4-201ENST00000378125 FRAT1Q92837 279 aaPredicted RBP25.01■■□□□ 1.59
PCDHA4-201ENST00000378125 NLRP1Q9C000 1473 aa25.01■■□□□ 1.59
PCDHA4-201ENST00000378125 TNRQ92752 1358 aa25■■□□□ 1.59
PCDHA4-201ENST00000378125 CEBPAP49715 358 aaPredicted RBP25■■□□□ 1.59
PCDHA4-201ENST00000378125 NRXN3Q9Y4C0 1643 aa25■■□□□ 1.59
PCDHA4-201ENST00000378125 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
PCDHA4-201ENST00000378125 BCL2L13Q9BXK5 485 aa24.99■■□□□ 1.59
PCDHA4-201ENST00000378125 DLC1Q96QB1 1528 aa24.97■■□□□ 1.59
PCDHA4-201ENST00000378125 WASLO00401 505 aaPredicted RBP24.97■■□□□ 1.59
PCDHA4-201ENST00000378125 PDE4AP27815 886 aa24.97■■□□□ 1.59
PCDHA4-201ENST00000378125 NPM2Q86SE8 214 aaKnown RBP24.97■■□□□ 1.59
PCDHA4-201ENST00000378125 WDR63Q8IWG1 891 aa24.97■■□□□ 1.59
PCDHA4-201ENST00000378125 PANK1Q8TE04 598 aa24.97■■□□□ 1.59
PCDHA4-201ENST00000378125 KDM2BQ8NHM5 1336 aa24.97■■□□□ 1.59
PCDHA4-201ENST00000378125 DIAPH1O60610 1272 aaKnown RBP24.95■■□□□ 1.58
PCDHA4-201ENST00000378125 PLEKHF1Q96S99 279 aa24.95■■□□□ 1.58
PCDHA4-201ENST00000378125 COL3A1P02461 1466 aaPredicted RBP24.94■■□□□ 1.58
PCDHA4-201ENST00000378125 CCDC27Q2M243 656 aa24.94■■□□□ 1.58
PCDHA4-201ENST00000378125 ZRANB1Q9UGI0 708 aa24.94■■□□□ 1.58
PCDHA4-201ENST00000378125 COG6Q9Y2V7 657 aa24.94■■□□□ 1.58
PCDHA4-201ENST00000378125 ANKRD26Q9UPS8 1709 aa24.94■■□□□ 1.58
PCDHA4-201ENST00000378125 RARSP54136 660 aaKnown RBP24.94■■□□□ 1.58
PCDHA4-201ENST00000378125 TSR2Q969E8 191 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms