RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 RAPGEF4Q8WZA2 1011 aa19.74■□□□□ 0.75
RGP1-201ENST00000378078 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
RGP1-201ENST00000378078 KRT18P05783 430 aaKnown RBP19.74■□□□□ 0.75
RGP1-201ENST00000378078 ST20-MTHFSA0A0A6YYL1 179 aa19.74■□□□□ 0.75
RGP1-201ENST00000378078 CDK5RAP3Q96JB5 506 aa19.74■□□□□ 0.75
RGP1-201ENST00000378078 TNIKQ9UKE5 1360 aa19.74■□□□□ 0.75
RGP1-201ENST00000378078 PAXIP1Q6ZW49 1069 aaPredicted RBP19.74■□□□□ 0.75
RGP1-201ENST00000378078 AK7Q96M32 723 aa19.73■□□□□ 0.75
RGP1-201ENST00000378078 ATP6V1DQ9Y5K8 247 aa19.73■□□□□ 0.75
RGP1-201ENST00000378078 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
RGP1-201ENST00000378078 APAF1O14727 1248 aa19.72■□□□□ 0.75
RGP1-201ENST00000378078 NEFHP12036 1026 aa19.72■□□□□ 0.75
RGP1-201ENST00000378078 CGNL1Q0VF96 1302 aa19.72■□□□□ 0.75
RGP1-201ENST00000378078 EVC2Q86UK5 1308 aa19.72■□□□□ 0.75
RGP1-201ENST00000378078 FMNL2Q96PY5 1086 aa19.71■□□□□ 0.75
RGP1-201ENST00000378078 BRMS1Q9HCU9 246 aa19.71■□□□□ 0.75
RGP1-201ENST00000378078 BICDL1Q6ZP65 573 aa19.71■□□□□ 0.75
RGP1-201ENST00000378078 KIF6Q6ZMV9 814 aa19.71■□□□□ 0.75
RGP1-201ENST00000378078 LNPKQ9C0E8 428 aa19.71■□□□□ 0.75
RGP1-201ENST00000378078 DDX54Q8TDD1 881 aaKnown RBP19.7■□□□□ 0.74
RGP1-201ENST00000378078 DIAPH1O60610 1272 aaKnown RBP19.7■□□□□ 0.74
RGP1-201ENST00000378078 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
RGP1-201ENST00000378078 RNF20Q5VTR2 975 aa19.69■□□□□ 0.74
RGP1-201ENST00000378078 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
RGP1-201ENST00000378078 STK3Q13188 491 aa19.69■□□□□ 0.74
RGP1-201ENST00000378078 ESCO1Q5FWF5 840 aa19.68■□□□□ 0.74
RGP1-201ENST00000378078 CABP2Q9NPB3 220 aa19.68■□□□□ 0.74
RGP1-201ENST00000378078 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
RGP1-201ENST00000378078 SMC2O95347 1197 aa19.68■□□□□ 0.74
RGP1-201ENST00000378078 SIL1Q9H173 461 aa19.68■□□□□ 0.74
RGP1-201ENST00000378078 CNNM1Q9NRU3 951 aa19.68■□□□□ 0.74
RGP1-201ENST00000378078 SYCP1Q15431 976 aa19.67■□□□□ 0.74
RGP1-201ENST00000378078 SEPT11Q9NVA2 429 aaKnown RBP19.67■□□□□ 0.74
RGP1-201ENST00000378078 TTC39AQ5SRH9 613 aa19.67■□□□□ 0.74
RGP1-201ENST00000378078 MNS1Q8NEH6 495 aa19.67■□□□□ 0.74
RGP1-201ENST00000378078 C1orf115Q9H7X2 142 aa19.66■□□□□ 0.74
RGP1-201ENST00000378078 PLCD3Q8N3E9 789 aa19.66■□□□□ 0.74
RGP1-201ENST00000378078 MPHOSPH10O00566 681 aaKnown RBP19.66■□□□□ 0.74
RGP1-201ENST00000378078 TEX35Q5T0J7 233 aa19.66■□□□□ 0.74
RGP1-201ENST00000378078 ZSCAN29Q8IWY8 852 aaPredicted RBP19.65■□□□□ 0.74
RGP1-201ENST00000378078 MYL6BP14649 208 aa19.65■□□□□ 0.74
RGP1-201ENST00000378078 RNF214Q8ND24 703 aa19.65■□□□□ 0.74
RGP1-201ENST00000378078 FSD1Q9BTV5 496 aa19.65■□□□□ 0.74
RGP1-201ENST00000378078 SPDYE4A6NLX3 237 aa19.64■□□□□ 0.73
RGP1-201ENST00000378078 PDE4AP27815 886 aa19.64■□□□□ 0.73
RGP1-201ENST00000378078 NLRP13Q86W25 1043 aa19.64■□□□□ 0.73
RGP1-201ENST00000378078 PDCL3Q9H2J4 239 aa19.64■□□□□ 0.73
RGP1-201ENST00000378078 CCDC73Q6ZRK6 1079 aa19.64■□□□□ 0.73
RGP1-201ENST00000378078 MPNDQ8N594 471 aa19.63■□□□□ 0.73
RGP1-201ENST00000378078 KIF15Q9NS87 1388 aa19.63■□□□□ 0.73
RGP1-201ENST00000378078 TTC16Q8NEE8 873 aa19.63■□□□□ 0.73
RGP1-201ENST00000378078 CENPQQ7L2Z9 268 aaPredicted RBP19.63■□□□□ 0.73
RGP1-201ENST00000378078 TANGO6Q9C0B7 1094 aa19.63■□□□□ 0.73
RGP1-201ENST00000378078 GGNBP2Q9H3C7 697 aa19.63■□□□□ 0.73
RGP1-201ENST00000378078 FAM69CQ0P6D2 419 aa19.62■□□□□ 0.73
RGP1-201ENST00000378078 ABTB2Q8N961 1025 aa19.62■□□□□ 0.73
RGP1-201ENST00000378078 REC8O95072 547 aa19.62■□□□□ 0.73
RGP1-201ENST00000378078 CCDC85AQ96PX6 553 aaPredicted RBP19.62■□□□□ 0.73
RGP1-201ENST00000378078 SPC24Q8NBT2 197 aa19.61■□□□□ 0.73
RGP1-201ENST00000378078 TSHZ2Q9NRE2 1034 aa19.61■□□□□ 0.73
RGP1-201ENST00000378078 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
RGP1-201ENST00000378078 ZNF219Q9P2Y4 722 aaPredicted RBP19.61■□□□□ 0.73
RGP1-201ENST00000378078 MAGEC2Q9UBF1 373 aaPredicted RBP19.61■□□□□ 0.73
RGP1-201ENST00000378078 CCDC173Q0VFZ6 552 aa19.61■□□□□ 0.73
RGP1-201ENST00000378078 NUP133Q8WUM0 1156 aa19.61■□□□□ 0.73
RGP1-201ENST00000378078 UBTFL1P0CB47 393 aaPredicted RBP19.6■□□□□ 0.73
RGP1-201ENST00000378078 XBP1P17861 261 aa19.6■□□□□ 0.73
RGP1-201ENST00000378078 PANK1Q8TE04 598 aa19.6■□□□□ 0.73
RGP1-201ENST00000378078 ECM2O94769 699 aaPredicted RBP19.59■□□□□ 0.73
RGP1-201ENST00000378078 FHOD3Q2V2M9 1422 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 CCDC144AA2RUR9 1427 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 E9PSI1 815 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 ENOX2Q16206 610 aaKnown RBP19.59■□□□□ 0.73
RGP1-201ENST00000378078 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 PSMD1Q99460 953 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 SDF4Q9BRK5 362 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 NEBLO76041 1014 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 FAM177A1Q8N128 213 aaPredicted RBP19.59■□□□□ 0.73
RGP1-201ENST00000378078 XPCQ01831 940 aaPredicted RBP19.59■□□□□ 0.73
RGP1-201ENST00000378078 CENPHQ9H3R5 247 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
RGP1-201ENST00000378078 DZIP1LQ8IYY4 767 aaKnown RBP19.58■□□□□ 0.73
RGP1-201ENST00000378078 ERC2O15083 957 aa19.58■□□□□ 0.73
RGP1-201ENST00000378078 RRP1P56182 461 aaKnown RBP19.58■□□□□ 0.73
RGP1-201ENST00000378078 INTS3Q68E01 1043 aaKnown RBP19.58■□□□□ 0.72
RGP1-201ENST00000378078 SSR1P43307 286 aaKnown RBP19.57■□□□□ 0.72
RGP1-201ENST00000378078 VGFO15240 615 aaPredicted RBP19.57■□□□□ 0.72
RGP1-201ENST00000378078 NLRP6P59044 892 aa19.57■□□□□ 0.72
RGP1-201ENST00000378078 SEPT7Q16181 437 aaKnown RBP19.57■□□□□ 0.72
RGP1-201ENST00000378078 USP5P45974 858 aa19.57■□□□□ 0.72
RGP1-201ENST00000378078 SSBP05455 408 aaKnown RBP eCLIP19.56■□□□□ 0.72
RGP1-201ENST00000378078 FAM193AP78312 1265 aa19.56■□□□□ 0.72
RGP1-201ENST00000378078 H0YHG0 523 aa19.55■□□□□ 0.72
RGP1-201ENST00000378078 CDR1P51861 262 aa19.55■□□□□ 0.72
RGP1-201ENST00000378078 SKOR2Q2VWA4 1001 aaPredicted RBP19.55■□□□□ 0.72
RGP1-201ENST00000378078 GRM1Q13255 1194 aa19.55■□□□□ 0.72
RGP1-201ENST00000378078 GSE1Q14687 1217 aa19.54■□□□□ 0.72
RGP1-201ENST00000378078 DDX19BQ9UMR2 479 aa19.54■□□□□ 0.72
RGP1-201ENST00000378078 TAX1BP1Q86VP1 789 aa19.54■□□□□ 0.72
RGP1-201ENST00000378078 CNTROBQ8N137 903 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms